RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 KCNE1BA0A087WTH5 132 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 TRBV11-1A0A0K0K1C0 115 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 RNF103-CHMP3A0A140T963 221 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 SPAARA0A1B0GVQ0 90 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 hDV103S1A0JD37 113 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 TMEM30CPA0ZSE6 113 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 BICDL2A1A5D9 508 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 KRT87PA6NCN2 255 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 BBIP1A8MTZ0 92 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 H0YJX3 145 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 GOLGA8MH3BSY2 632 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 J3KT08 172 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 DEFB4AO15263 64 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 FABP7O15540 132 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 MFSD11O43934 449 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 NEMFO60524 1076 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 SNNO75324 88 aaPredicted RBP-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 E2F6O75461 281 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 PTBP3O95758 552 aaKnown RBP-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 GUCA1CO95843 209 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 HMGB1P09429 215 aaKnown RBP-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 C8orf88P0DMB2 117 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 FGF7P21781 194 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 S100A4P26447 101 aaKnown RBP-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 STOMP27105 288 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 ADORA1P30542 326 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 HNMTP50135 292 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 CLDN12P56749 244 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 NPC2P61916 151 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 RPS28P62857 69 aaKnown RBP-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 HPCAP84074 193 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 NUCB1Q02818 461 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 CAV1Q03135 178 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 SSBP1Q04837 148 aaKnown RBP-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 STX4Q12846 297 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 DNAJC3Q13217 504 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 DIAPH2-AS1Q14236 149 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 MRPL23Q16540 153 aaKnown RBP-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 CCDC184Q52MB2 194 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 PIP5KL1Q5T9C9 394 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 RESP18Q5W5W9 173 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 DUPD1Q68J44 220 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 HBMQ6B0K9 141 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 C5orf46Q6UWT4 87 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 IZUMO2Q6UXV1 221 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 FUNDC1Q8IVP5 155 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 C20orf196Q8IYI0 205 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 TRAM1L1Q8N609 369 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 TCTEX1D1Q8N7M0 179 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 SLC25A40Q8TBP6 338 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 FAM45AQ8TCE6 357 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 AGR3Q8TD06 166 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 CDKL2Q92772 493 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 CENPNQ96H22 339 aaPredicted RBP-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 HIST1H2BLQ99880 126 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 DHRS9Q9BPW9 319 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 SELENOSQ9BQE4 189 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 CENPKQ9BS16 269 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 TPPP3Q9BW30 176 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 WDR61Q9GZS3 305 aaKnown RBP-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 NAA50Q9GZZ1 169 aaKnown RBP-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 C2orf40Q9H1Z8 148 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 MYH16Q9H6N6 1097 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 GRPEL1Q9HAV7 217 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 LINC00846Q9NV44 126 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 STMN3Q9NZ72 180 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 DICER1Q9UPY3 1922 aaKnown RBP-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 ERCC6L2Q5T890 1561 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 TNS1Q9HBL0 1735 aaKnown RBP-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 CASZ1Q86V15 1759 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 PTPRDP23468 1912 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 DOCK11Q5JSL3 2073 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 MAP3K1Q13233 1512 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 NISCHQ9Y2I1 1504 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 A0A087X0T9 212 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 TRGV10A0A0A0MS01 117 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 GOLGA8QA0A0J9YX86 632 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 TEX50A0A1B0GTY4 177 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 TMEM189A5PLL7 270 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 GOLGA8IPA6NC78 632 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 GOLGA8OA6NCC3 632 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 ARL5CA6NH57 179 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 LRRIQ4A6NIV6 560 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 METTL15A6NJ78 407 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 CENPXA8MT69 81 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 EFCAB9A8MZ26 197 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 GOLGA8NF8WBI6 632 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 H7BZZ5 65 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 KPNA3O00505 521 aaPredicted RBP-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 MPHOSPH10O00566 681 aaKnown RBP-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 CIB2O75838 187 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 IFNA10P01566 189 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 SERPINE1P05121 402 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 LINC00614P0C842 121 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 NEFHP12036 1026 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 S100A5P33763 92 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 RPS5P46782 204 aaKnown RBP-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 CAPZBP47756 277 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 H2BFSP57053 126 aa-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 229.7 ms