RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 MRAP2Q96G30 205 aa11.88□□□□□ -0.51
CTNS-202ENST00000381870 RPUSD1Q9UJJ7 312 aaKnown RBP11.88□□□□□ -0.51
CTNS-202ENST00000381870 HHLA3Q9XRX5 114 aa11.88□□□□□ -0.51
CTNS-202ENST00000381870 A0A1W2PPI3 338 aa11.88□□□□□ -0.51
CTNS-202ENST00000381870 LAMTOR5O43504 91 aa11.88□□□□□ -0.51
CTNS-202ENST00000381870 CFIP05156 583 aa11.88□□□□□ -0.51
CTNS-202ENST00000381870 MZT1Q08AG7 82 aa11.88□□□□□ -0.51
CTNS-202ENST00000381870 C1orf210Q8IVY1 113 aa11.88□□□□□ -0.51
CTNS-202ENST00000381870 C8orf46Q8TAG6 207 aa11.88□□□□□ -0.51
CTNS-202ENST00000381870 TMEM167AQ8TBQ9 72 aa11.88□□□□□ -0.51
CTNS-202ENST00000381870 ZNF479Q96JC4 524 aa11.88□□□□□ -0.51
CTNS-202ENST00000381870 TPSG1Q9NRR2 321 aa11.88□□□□□ -0.51
CTNS-202ENST00000381870 GPR179Q6PRD1 2367 aa11.88□□□□□ -0.51
CTNS-202ENST00000381870 CUL9Q8IWT3 2517 aa11.88□□□□□ -0.51
CTNS-202ENST00000381870 TRGV5A0A0B4J1U4 118 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 SPRY3O43610 288 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 LHBP01229 141 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 NPYP01303 97 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 TNFRSF1AP19438 455 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 DIAPH2-AS1Q14236 149 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 ZNF562Q6V9R5 426 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 ZNF833PQ6ZTB9 187 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 GTSCR1Q86UQ5 136 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 FAM216BQ8N7L0 139 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 FER1L6-AS2Q96M78 137 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 C17orf77Q96MU5 243 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 TRGV9Q99603 122 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 CCL13Q99616 98 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 MC5RP33032 325 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 C20orf78Q9BR46 151 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 TM2D2Q9BX73 214 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 CFAP47Q6ZTR5 3102 aa11.87□□□□□ -0.51
CTNS-202ENST00000381870 SPENQ96T58 3664 aaKnown RBP11.87□□□□□ -0.51
CTNS-202ENST00000381870 IGHV1-18A0A0C4DH31 117 aa11.86□□□□□ -0.51
CTNS-202ENST00000381870 KIR2DL2P43627 348 aaPredicted RBP11.86□□□□□ -0.51
CTNS-202ENST00000381870 LYZP61626 148 aa11.86□□□□□ -0.51
CTNS-202ENST00000381870 CRYGCP07315 174 aa11.86□□□□□ -0.51
CTNS-202ENST00000381870 ODF1Q14990 250 aa11.86□□□□□ -0.51
CTNS-202ENST00000381870 GAGE13Q4V321 117 aa11.86□□□□□ -0.51
CTNS-202ENST00000381870 TMEM164Q5U3C3 297 aa11.86□□□□□ -0.51
CTNS-202ENST00000381870 ZNF48Q96MX3 618 aaPredicted RBP11.86□□□□□ -0.51
CTNS-202ENST00000381870 C8orf49Q96NF6 230 aa11.86□□□□□ -0.51
CTNS-202ENST00000381870 PSG8Q9UQ74 426 aa11.86□□□□□ -0.51
CTNS-202ENST00000381870 HIGD1AQ9Y241 93 aa11.86□□□□□ -0.51
CTNS-202ENST00000381870 SMG1Q96Q15 3661 aaKnown RBP11.85□□□□□ -0.51
CTNS-202ENST00000381870 GAFA1Q96PS6 74 aa11.85□□□□□ -0.51
CTNS-202ENST00000381870 PRO0461Q9UI25 63 aa11.85□□□□□ -0.51
CTNS-202ENST00000381870 DMXL1Q9Y485 3027 aa11.85□□□□□ -0.51
CTNS-202ENST00000381870 ABCA1O95477 2261 aa11.85□□□□□ -0.51
CTNS-202ENST00000381870 ASPMQ8IZT6 3477 aa11.85□□□□□ -0.51
CTNS-202ENST00000381870 PATE3B3GLJ2 98 aa11.85□□□□□ -0.51
CTNS-202ENST00000381870 PRRG2O14669 202 aa11.85□□□□□ -0.51
CTNS-202ENST00000381870 PPIFP30405 207 aaKnown RBP11.85□□□□□ -0.51
CTNS-202ENST00000381870 CKS2P33552 79 aa11.85□□□□□ -0.51
CTNS-202ENST00000381870 PIFOQ8TCI5 191 aa11.85□□□□□ -0.51
CTNS-202ENST00000381870 RITA1Q96K30 269 aa11.85□□□□□ -0.51
CTNS-202ENST00000381870 ZNF71Q9NQZ8 489 aaPredicted RBP11.85□□□□□ -0.51
CTNS-202ENST00000381870 NPIPB5A8MRT5 1133 aa11.84□□□□□ -0.51
CTNS-202ENST00000381870 KLRC4-KLRK1H3BQV0 150 aa11.84□□□□□ -0.51
CTNS-202ENST00000381870 IGLV2-23P01705 113 aa11.84□□□□□ -0.51
CTNS-202ENST00000381870 Q6AWC8 147 aa11.84□□□□□ -0.51
CTNS-202ENST00000381870 OR10X1Q8NGY0 326 aa11.84□□□□□ -0.51
CTNS-202ENST00000381870 SLC25A39Q9BZJ4 359 aaPredicted RBP11.84□□□□□ -0.51
CTNS-202ENST00000381870 ZMAT4Q9H898 229 aa11.84□□□□□ -0.51
CTNS-202ENST00000381870 CADP27708 2225 aa11.84□□□□□ -0.51
CTNS-202ENST00000381870 C12orf74Q32Q52 190 aa11.84□□□□□ -0.51
CTNS-202ENST00000381870 TMEM75Q8N9X5 138 aa11.84□□□□□ -0.51
CTNS-202ENST00000381870 RAI1Q7Z5J4 1906 aaPredicted RBP11.84□□□□□ -0.51
CTNS-202ENST00000381870 TRBV6-1A0A0K0K1D8 114 aa11.83□□□□□ -0.52
CTNS-202ENST00000381870 MAPKAPK5-AS1Q8N8E1 139 aa11.83□□□□□ -0.52
CTNS-202ENST00000381870 OR4C13Q8NGP0 309 aa11.83□□□□□ -0.52
CTNS-202ENST00000381870 MRPL16Q9NX20 251 aaKnown RBP11.83□□□□□ -0.52
CTNS-202ENST00000381870 ICE1Q9Y2F5 2266 aa11.83□□□□□ -0.52
CTNS-202ENST00000381870 GAS8-AS1O95177 125 aa11.83□□□□□ -0.52
CTNS-202ENST00000381870 PRSS1P07477 247 aa11.83□□□□□ -0.52
CTNS-202ENST00000381870 MDS2Q8NDY4 140 aa11.83□□□□□ -0.52
CTNS-202ENST00000381870 ZNF502Q8TBZ5 544 aa11.83□□□□□ -0.52
CTNS-202ENST00000381870 LINC00574Q9H8X3 128 aa11.83□□□□□ -0.52
CTNS-202ENST00000381870 A0A1B0GWB2 263 aa11.82□□□□□ -0.52
CTNS-202ENST00000381870 IGLV1-44P01699 117 aa11.82□□□□□ -0.52
CTNS-202ENST00000381870 IGKCP01834 107 aa11.82□□□□□ -0.52
CTNS-202ENST00000381870 ZC2HC1BQ5TFG8 222 aa11.82□□□□□ -0.52
CTNS-202ENST00000381870 DCHS1Q96JQ0 3298 aa11.82□□□□□ -0.52
CTNS-202ENST00000381870 LEPP41159 167 aa11.82□□□□□ -0.52
CTNS-202ENST00000381870 MRGPRG-AS1Q2M3A8 158 aa11.82□□□□□ -0.52
CTNS-202ENST00000381870 CACNA1HO95180 2353 aa11.82□□□□□ -0.52
CTNS-202ENST00000381870 M0R3E3 92 aa11.81□□□□□ -0.52
CTNS-202ENST00000381870 CCL3L1P16619 93 aa11.81□□□□□ -0.52
CTNS-202ENST00000381870 LCNL1Q6ZST4 164 aa11.81□□□□□ -0.52
CTNS-202ENST00000381870 C8orf86Q6ZUL3 223 aa11.81□□□□□ -0.52
CTNS-202ENST00000381870 SYT8Q8NBV8 401 aa11.81□□□□□ -0.52
CTNS-202ENST00000381870 TMEM133Q9H2Q1 129 aa11.81□□□□□ -0.52
CTNS-202ENST00000381870 CDIP1Q9H305 208 aa11.81□□□□□ -0.52
CTNS-202ENST00000381870 TMEM14CQ9P0S9 112 aa11.81□□□□□ -0.52
CTNS-202ENST00000381870 LINC00312Q9Y6C7 94 aa11.81□□□□□ -0.52
CTNS-202ENST00000381870 TRBV19A0A075B6N1 114 aa11.81□□□□□ -0.52
CTNS-202ENST00000381870 APOMO95445 188 aa11.81□□□□□ -0.52
CTNS-202ENST00000381870 GATA3P23771 443 aa11.81□□□□□ -0.52
CTNS-202ENST00000381870 FOXC2Q99958 501 aa11.81□□□□□ -0.52
CTNS-202ENST00000381870 AGRNO00468 2067 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms