RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 UCN2Q96RP3 112 aa7.51□□□□□ -1.21
PTPRA-204ENST00000380393 TRAV2A0A0B4J234 112 aa7.51□□□□□ -1.21
PTPRA-204ENST00000380393 IGHV3-64DA0A0J9YX35 117 aa7.51□□□□□ -1.21
PTPRA-204ENST00000380393 TINCRA0A1B0GVN0 87 aa7.51□□□□□ -1.21
PTPRA-204ENST00000380393 LINC01549A6NIU2 74 aa7.51□□□□□ -1.21
PTPRA-204ENST00000380393 ZIC3O60481 467 aa7.51□□□□□ -1.21
PTPRA-204ENST00000380393 ATP5LO75964 103 aa7.51□□□□□ -1.21
PTPRA-204ENST00000380393 IFI27P40305 119 aaPredicted RBP7.51□□□□□ -1.21
PTPRA-204ENST00000380393 HSPE1P61604 102 aaKnown RBP7.51□□□□□ -1.21
PTPRA-204ENST00000380393 C3orf22Q8N5N4 141 aa7.51□□□□□ -1.21
PTPRA-204ENST00000380393 ZNRF2Q8NHG8 242 aa7.51□□□□□ -1.21
PTPRA-204ENST00000380393 TRAV8-4A0A0B4J246 113 aa7.5□□□□□ -1.21
PTPRA-204ENST00000380393 FAM90A5PA8MXJ8 464 aa7.5□□□□□ -1.21
PTPRA-204ENST00000380393 IGHV3-9P01782 118 aa7.5□□□□□ -1.21
PTPRA-204ENST00000380393 TNFAIP6P98066 277 aaPredicted RBP7.5□□□□□ -1.21
PTPRA-204ENST00000380393 RSPO1Q2MKA7 263 aaPredicted RBP7.5□□□□□ -1.21
PTPRA-204ENST00000380393 PEAR1Q5VY43 1037 aaPredicted RBP7.5□□□□□ -1.21
PTPRA-204ENST00000380393 HS3ST6Q96QI5 342 aa7.5□□□□□ -1.21
PTPRA-204ENST00000380393 INTS1Q8N201 2190 aaKnown RBP7.5□□□□□ -1.21
PTPRA-204ENST00000380393 IGHG3P01860 377 aa7.5□□□□□ -1.21
PTPRA-204ENST00000380393 Q6P435 159 aa7.5□□□□□ -1.21
PTPRA-204ENST00000380393 ODF3Q96PU9 254 aa7.5□□□□□ -1.21
PTPRA-204ENST00000380393 NABP2Q9BQ15 211 aa7.5□□□□□ -1.21
PTPRA-204ENST00000380393 RBAKDNA6NC62 111 aa7.5□□□□□ -1.21
PTPRA-204ENST00000380393 TMEM155Q4W5P6 130 aa7.5□□□□□ -1.21
PTPRA-204ENST00000380393 RPP21Q9H633 154 aaKnown RBP7.5□□□□□ -1.21
PTPRA-204ENST00000380393 PKIGQ9Y2B9 76 aa7.5□□□□□ -1.21
PTPRA-204ENST00000380393 SAP25Q8TEE9 199 aa7.49□□□□□ -1.21
PTPRA-204ENST00000380393 ZNF488Q96MN9 340 aa7.49□□□□□ -1.21
PTPRA-204ENST00000380393 DMXL2Q8TDJ6 3036 aa7.49□□□□□ -1.21
PTPRA-204ENST00000380393 PCNX2A6NKB5 2137 aa7.49□□□□□ -1.21
PTPRA-204ENST00000380393 MYMXA0A1B0GTQ4 84 aa7.49□□□□□ -1.21
PTPRA-204ENST00000380393 TCL1BO95988 128 aa7.49□□□□□ -1.21
PTPRA-204ENST00000380393 HBDP02042 147 aa7.49□□□□□ -1.21
PTPRA-204ENST00000380393 PSMG4Q5JS54 123 aa7.49□□□□□ -1.21
PTPRA-204ENST00000380393 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.49□□□□□ -1.21
PTPRA-204ENST00000380393 SLC25A10Q9UBX3 287 aaPredicted RBP7.49□□□□□ -1.21
PTPRA-204ENST00000380393 AMMECR1Q9Y4X0 333 aaPredicted RBP7.49□□□□□ -1.21
PTPRA-204ENST00000380393 IGLV2-14P01704 120 aa7.48□□□□□ -1.21
PTPRA-204ENST00000380393 GAGE2AQ6NT46 116 aa7.48□□□□□ -1.21
PTPRA-204ENST00000380393 ZNF493Q6ZR52 646 aa7.48□□□□□ -1.21
PTPRA-204ENST00000380393 PIFOQ8TCI5 191 aa7.48□□□□□ -1.21
PTPRA-204ENST00000380393 RPL35AP18077 110 aaKnown RBP7.48□□□□□ -1.21
PTPRA-204ENST00000380393 ZNF503Q96F45 646 aa7.48□□□□□ -1.21
PTPRA-204ENST00000380393 PRNDQ9UKY0 176 aa7.48□□□□□ -1.21
PTPRA-204ENST00000380393 IGKV3D-11A0A0A0MRZ8 115 aa7.48□□□□□ -1.21
PTPRA-204ENST00000380393 LY6G6EA0A0G2JKS1 128 aa7.48□□□□□ -1.21
PTPRA-204ENST00000380393 UQCRQO14949 82 aa7.48□□□□□ -1.21
PTPRA-204ENST00000380393 RS1O15537 224 aa7.48□□□□□ -1.21
PTPRA-204ENST00000380393 ZNF32P17041 273 aa7.48□□□□□ -1.21
PTPRA-204ENST00000380393 SBSPONQ8IVN8 264 aa7.48□□□□□ -1.21
PTPRA-204ENST00000380393 U3KQA8 63 aa7.48□□□□□ -1.21
PTPRA-204ENST00000380393 IGHV1OR21-1A0A087WYE8 117 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 CDX4O14627 284 aaPredicted RBP7.47□□□□□ -1.21
PTPRA-204ENST00000380393 SLC25A20O43772 301 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 P01737 135 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 CRYGBP07316 175 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 DAZAP2Q15038 168 aaPredicted RBP7.47□□□□□ -1.21
PTPRA-204ENST00000380393 DRAM1Q8N682 238 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 MAPKAPK5-AS1Q8N8E1 139 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 COQ2Q96H96 371 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 CALYQ9NYX4 217 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 AKAP13Q12802 2813 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 MGAQ8IWI9 3026 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 SPTBN4Q9H254 2564 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 DOCK7Q96N67 2140 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 M0R2P5 195 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 PMVKQ15126 192 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 RNF125Q96EQ8 232 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 IGKCP01834 107 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 C20orf204Q6ZNR8 217 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 RFESDQ8TAC1 157 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 NTN5Q8WTR8 489 aaPredicted RBP7.47□□□□□ -1.21
PTPRA-204ENST00000380393 HHLA3Q9XRX5 114 aa7.47□□□□□ -1.21
PTPRA-204ENST00000380393 CEP295Q9C0D2 2601 aa7.46□□□□□ -1.21
PTPRA-204ENST00000380393 TRBV7-3A0A075B6L6 115 aa7.46□□□□□ -1.21
PTPRA-204ENST00000380393 NPIPB13A6NJU9 1138 aa7.46□□□□□ -1.21
PTPRA-204ENST00000380393 NPIPB4C9JG80 1138 aa7.46□□□□□ -1.21
PTPRA-204ENST00000380393 PRSS1P07477 247 aa7.46□□□□□ -1.21
PTPRA-204ENST00000380393 Q8N1Y9 231 aa7.46□□□□□ -1.21
PTPRA-204ENST00000380393 OR11H6Q8NGC7 330 aa7.46□□□□□ -1.21
PTPRA-204ENST00000380393 AAMDCQ9H7C9 122 aa7.46□□□□□ -1.21
PTPRA-204ENST00000380393 KLF13Q9Y2Y9 288 aaPredicted RBP7.46□□□□□ -1.21
PTPRA-204ENST00000380393 CHCHD2Q9Y6H1 151 aaPredicted RBP7.46□□□□□ -1.21
PTPRA-204ENST00000380393 V9GYY9 64 aa7.46□□□□□ -1.21
PTPRA-204ENST00000380393 NPYP01303 97 aa7.46□□□□□ -1.22
PTPRA-204ENST00000380393 ZNF56Q15929 161 aa7.46□□□□□ -1.22
PTPRA-204ENST00000380393 C17orf82Q86X59 251 aaPredicted RBP7.46□□□□□ -1.22
PTPRA-204ENST00000380393 LINC00526Q96FQ7 95 aa7.46□□□□□ -1.22
PTPRA-204ENST00000380393 TMEM160Q9NX00 188 aa7.46□□□□□ -1.22
PTPRA-204ENST00000380393 PRO0628Q9UI54 55 aa7.46□□□□□ -1.22
PTPRA-204ENST00000380393 PEX7O00628 323 aa7.46□□□□□ -1.22
PTPRA-204ENST00000380393 DLX6P56179 175 aa7.46□□□□□ -1.22
PTPRA-204ENST00000380393 UBE2D3P61077 147 aa7.46□□□□□ -1.22
PTPRA-204ENST00000380393 UBE2D2P62837 147 aa7.46□□□□□ -1.22
PTPRA-204ENST00000380393 HES3Q5TGS1 186 aa7.46□□□□□ -1.22
PTPRA-204ENST00000380393 FOXL2NBQ6ZUU3 175 aa7.46□□□□□ -1.22
PTPRA-204ENST00000380393 IFI27L2Q9H2X8 130 aa7.46□□□□□ -1.22
PTPRA-204ENST00000380393 TRGV11A0A075B6L2 103 aa7.45□□□□□ -1.22
PTPRA-204ENST00000380393 ZFAND5O76080 213 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 189.7 ms