RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 TMEM213A2RRL7 107 aa6.78□□□□□ -1.32
NHLRC3-201ENST00000379599 TM4SF5O14894 197 aa6.78□□□□□ -1.32
NHLRC3-201ENST00000379599 TNFRSF1AP19438 455 aa6.78□□□□□ -1.32
NHLRC3-201ENST00000379599 KRTAP27-1Q3LI81 207 aa6.78□□□□□ -1.32
NHLRC3-201ENST00000379599 SPRNQ5BIV9 151 aa6.78□□□□□ -1.32
NHLRC3-201ENST00000379599 SCGB1D4Q6XE38 83 aa6.78□□□□□ -1.32
NHLRC3-201ENST00000379599 ZNF497Q6ZNH5 498 aa6.78□□□□□ -1.32
NHLRC3-201ENST00000379599 PRNTQ86SH4 94 aa6.78□□□□□ -1.32
NHLRC3-201ENST00000379599 DSCAML1Q8TD84 2053 aa6.78□□□□□ -1.32
NHLRC3-201ENST00000379599 IGHV3-13P01766 116 aa6.78□□□□□ -1.32
NHLRC3-201ENST00000379599 COL9A1P20849 921 aa6.78□□□□□ -1.32
NHLRC3-201ENST00000379599 DUTP33316 252 aaKnown RBP6.78□□□□□ -1.32
NHLRC3-201ENST00000379599 C4orf26Q17RF5 130 aa6.78□□□□□ -1.32
NHLRC3-201ENST00000379599 C10orf113Q5VZT2 155 aa6.78□□□□□ -1.32
NHLRC3-201ENST00000379599 SPEGQ15772 3267 aa6.77□□□□□ -1.32
NHLRC3-201ENST00000379599 REV3LO60673 3130 aa6.77□□□□□ -1.32
NHLRC3-201ENST00000379599 C12orf77C9JDV5 145 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 K7ESF4 209 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 CECR9P0C854 216 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 LINC00596Q86U02 117 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 ASCL2Q99929 193 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 MRPL35Q9NZE8 188 aaKnown RBP6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 ADAMTS20P59510 1910 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 RBAKDNA6NC62 111 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 SRRM4A7MD48 611 aaKnown RBP6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 PMVKQ15126 192 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 GAGE2AQ6NT46 116 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 SLC22A18ASQ8N1D0 253 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 WDR31Q8NA23 367 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 MLST8Q9BVC4 326 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 RTL8AQ9BWD3 113 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 CHD9Q3L8U1 2897 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 UBE2D3P61077 147 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 UBE2D2P62837 147 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 C3orf22Q8N5N4 141 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 KIR2DL5BQ8NHK3 375 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 C1orf43Q9BWL3 253 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 MSRB2Q9Y3D2 182 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 COL4A2P08572 1712 aa6.77□□□□□ -1.33
NHLRC3-201ENST00000379599 TRGV11A0A075B6L2 103 aa6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 TEX49A0A1B0GTD5 131 aa6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 MBD3L4A6NDZ8 208 aaPredicted RBP6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 MBD3L3A6NE82 208 aaPredicted RBP6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 MBD3L5A6NJ08 208 aaPredicted RBP6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 SHISA9B4DS77 424 aa6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 F8WDY8 70 aa6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 H7C2G1 150 aa6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 CDX4O14627 284 aaPredicted RBP6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 FOXF2Q12947 444 aa6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 SLC25A53Q5H9E4 307 aa6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 TRPT1Q86TN4 253 aaKnown RBP6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 COL6A3P12111 3177 aa6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 F5P12259 2224 aa6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 IGHV3-48P01763 117 aa6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 SSR4P51571 173 aa6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 CRIP2P52943 208 aaPredicted RBP6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 UCNP55089 124 aa6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 BAALCQ8WXS3 180 aa6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 ZMAT4Q9H898 229 aa6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 TET2Q6N021 2002 aaPredicted RBP6.76□□□□□ -1.33
NHLRC3-201ENST00000379599 IGHV3-9P01782 118 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 SBSPONQ8IVN8 264 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 MRAPQ8TCY5 172 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 FMC1Q96HJ9 113 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 C2orf16Q68DN1 1984 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 A0A1B0GX51 115 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 SVILO95425 2214 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 EIF4EBP1Q13541 118 aaPredicted RBP6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 MRPL51Q4U2R6 128 aaKnown RBP6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 TMEM219Q86XT9 240 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 FXYD5Q96DB9 178 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 IFI27L2Q9H2X8 130 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 PRNDQ9UKY0 176 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 IGKV3D-11A0A0A0MRZ8 115 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 ATP5LO75964 103 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 FAM104BQ5XKR9 115 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 Q71RC1 249 aaPredicted RBP6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 MDP1Q86V88 176 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 ZNF441Q8N8Z8 693 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 RITA1Q96K30 269 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 S1PR3Q99500 378 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 FOXB1Q99853 325 aa6.75□□□□□ -1.33
NHLRC3-201ENST00000379599 TMEM30CPA0ZSE6 113 aa6.74□□□□□ -1.33
NHLRC3-201ENST00000379599 TIMM23O14925 209 aa6.74□□□□□ -1.33
NHLRC3-201ENST00000379599 WISP2O76076 250 aa6.74□□□□□ -1.33
NHLRC3-201ENST00000379599 PCBD1P61457 104 aa6.74□□□□□ -1.33
NHLRC3-201ENST00000379599 LY6DQ14210 128 aa6.74□□□□□ -1.33
NHLRC3-201ENST00000379599 TMEM196Q5HYL7 178 aa6.74□□□□□ -1.33
NHLRC3-201ENST00000379599 LINC00477Q96M19 166 aa6.74□□□□□ -1.33
NHLRC3-201ENST00000379599 DUX3Q96PT4 197 aa6.74□□□□□ -1.33
NHLRC3-201ENST00000379599 ZNF256Q9Y2P7 627 aaPredicted RBP6.74□□□□□ -1.33
NHLRC3-201ENST00000379599 SPINT2O43291 252 aa6.74□□□□□ -1.33
NHLRC3-201ENST00000379599 CD3EP07766 207 aa6.74□□□□□ -1.33
NHLRC3-201ENST00000379599 IL11RAQ14626 422 aa6.74□□□□□ -1.33
NHLRC3-201ENST00000379599 COL5A1P20908 1838 aaPredicted RBP6.74□□□□□ -1.33
NHLRC3-201ENST00000379599 J3QLI3 93 aa6.74□□□□□ -1.33
NHLRC3-201ENST00000379599 UQCRQO14949 82 aa6.74□□□□□ -1.33
NHLRC3-201ENST00000379599 TCRAP04437 139 aa6.74□□□□□ -1.33
NHLRC3-201ENST00000379599 GATA4P43694 442 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 227.8 ms