RNA–Protein interactions for RNA: ENST00000378313.6

C19orf54-201, Transcript of chromosome 19 open reading frame 54, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C19orf54, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-201ENST00000378313 Q5PR19 223 aa12.69□□□□□ -0.38
C19orf54-201ENST00000378313 IGFL2Q6UWQ7 119 aa12.69□□□□□ -0.38
C19orf54-201ENST00000378313 TMEM108Q6UXF1 575 aa12.69□□□□□ -0.38
C19orf54-201ENST00000378313 PCP2Q8IVA1 136 aa12.69□□□□□ -0.38
C19orf54-201ENST00000378313 WFDC12Q8WWY7 111 aa12.69□□□□□ -0.38
C19orf54-201ENST00000378313 SHANK2-AS3Q9BTD1 123 aa12.69□□□□□ -0.38
C19orf54-201ENST00000378313 SHISA9B4DS77 424 aa12.69□□□□□ -0.38
C19orf54-201ENST00000378313 FCN3O75636 299 aa12.69□□□□□ -0.38
C19orf54-201ENST00000378313 FTH1P19P0C7X4 201 aa12.69□□□□□ -0.38
C19orf54-201ENST00000378313 LYZL1Q6UWQ5 148 aa12.69□□□□□ -0.38
C19orf54-201ENST00000378313 TPPP3Q9BW30 176 aa12.69□□□□□ -0.38
C19orf54-201ENST00000378313 CD300EQ496F6 205 aaPredicted RBP12.69□□□□□ -0.38
C19orf54-201ENST00000378313 RASL11BQ9BPW5 248 aa12.69□□□□□ -0.38
C19orf54-201ENST00000378313 ENSAO43768 121 aaKnown RBP12.68□□□□□ -0.38
C19orf54-201ENST00000378313 NDUFS7O75251 213 aa12.68□□□□□ -0.38
C19orf54-201ENST00000378313 NMUP48645 174 aa12.68□□□□□ -0.38
C19orf54-201ENST00000378313 MRPL51Q4U2R6 128 aaKnown RBP12.68□□□□□ -0.38
C19orf54-201ENST00000378313 AMN1Q8IY45 258 aa12.68□□□□□ -0.38
C19orf54-201ENST00000378313 URB1O60287 2271 aaKnown RBP12.68□□□□□ -0.38
C19orf54-201ENST00000378313 H3BRN7 92 aa12.68□□□□□ -0.38
C19orf54-201ENST00000378313 FDCSPQ8NFU4 85 aa12.68□□□□□ -0.38
C19orf54-201ENST00000378313 ARFGEF3Q5TH69 2177 aa12.67□□□□□ -0.38
C19orf54-201ENST00000378313 TMEM213A2RRL7 107 aa12.67□□□□□ -0.38
C19orf54-201ENST00000378313 GAGE12HA6NDE8 117 aa12.67□□□□□ -0.38
C19orf54-201ENST00000378313 I3L2K1 104 aa12.67□□□□□ -0.38
C19orf54-201ENST00000378313 CD59P13987 128 aa12.67□□□□□ -0.38
C19orf54-201ENST00000378313 CCL11P51671 97 aa12.67□□□□□ -0.38
C19orf54-201ENST00000378313 TMEM133Q9H2Q1 129 aa12.67□□□□□ -0.38
C19orf54-201ENST00000378313 SIGLEC9Q9Y336 463 aa12.67□□□□□ -0.38
C19orf54-201ENST00000378313 CADP27708 2225 aa12.67□□□□□ -0.38
C19orf54-201ENST00000378313 TEX22C9J3V5 150 aa12.67□□□□□ -0.38
C19orf54-201ENST00000378313 DLX6P56179 175 aa12.67□□□□□ -0.38
C19orf54-201ENST00000378313 SCGB2A2Q13296 93 aa12.67□□□□□ -0.38
C19orf54-201ENST00000378313 FOXI2Q6ZQN5 318 aa12.67□□□□□ -0.38
C19orf54-201ENST00000378313 C17orf77Q96MU5 243 aa12.67□□□□□ -0.38
C19orf54-201ENST00000378313 ARRDC1-AS1Q9H2J1 176 aa12.66□□□□□ -0.38
C19orf54-201ENST00000378313 TSSC4Q9Y5U2 329 aaPredicted RBP12.66□□□□□ -0.38
C19orf54-201ENST00000378313 LINC01546A6NGU7 62 aa12.66□□□□□ -0.38
C19orf54-201ENST00000378313 FBLL1A6NHQ2 334 aaKnown RBP12.66□□□□□ -0.38
C19orf54-201ENST00000378313 NUP37Q8NFH4 326 aa12.66□□□□□ -0.38
C19orf54-201ENST00000378313 SPATA25Q9BR10 227 aa12.66□□□□□ -0.38
C19orf54-201ENST00000378313 ZMAT4Q9H898 229 aa12.66□□□□□ -0.38
C19orf54-201ENST00000378313 NKX2-8O15522 239 aa12.65□□□□□ -0.38
C19orf54-201ENST00000378313 NDUFB3O43676 98 aa12.65□□□□□ -0.38
C19orf54-201ENST00000378313 IGKV1-17P01599 117 aa12.65□□□□□ -0.38
C19orf54-201ENST00000378313 APELAP0DMC3 54 aa12.65□□□□□ -0.38
C19orf54-201ENST00000378313 CCL8P80075 99 aa12.65□□□□□ -0.38
C19orf54-201ENST00000378313 COX8CQ7Z4L0 72 aa12.65□□□□□ -0.38
C19orf54-201ENST00000378313 DKK2Q9UBU2 259 aa12.65□□□□□ -0.38
C19orf54-201ENST00000378313 WI2-2373I1.2A0A1W2PRP0 233 aa12.65□□□□□ -0.38
C19orf54-201ENST00000378313 TNFRSF13BO14836 293 aaPredicted RBP12.65□□□□□ -0.38
C19orf54-201ENST00000378313 MRPS12O15235 138 aaKnown RBP12.65□□□□□ -0.38
C19orf54-201ENST00000378313 RBP4P02753 201 aa12.65□□□□□ -0.38
C19orf54-201ENST00000378313 RAB9AP51151 201 aa12.65□□□□□ -0.38
C19orf54-201ENST00000378313 TCTAP57738 103 aa12.65□□□□□ -0.38
C19orf54-201ENST00000378313 DHRS13Q6UX07 377 aa12.65□□□□□ -0.38
C19orf54-201ENST00000378313 C8orf49Q96NF6 230 aa12.65□□□□□ -0.38
C19orf54-201ENST00000378313 ASCL2Q99929 193 aa12.65□□□□□ -0.38
C19orf54-201ENST00000378313 CD40P25942 277 aa12.64□□□□□ -0.39
C19orf54-201ENST00000378313 BCL6BQ8N143 479 aaPredicted RBP12.64□□□□□ -0.39
C19orf54-201ENST00000378313 IGHV3-72A0A0B4J1Y9 119 aa12.64□□□□□ -0.39
C19orf54-201ENST00000378313 VSTM5A8MXK1 200 aa12.64□□□□□ -0.39
C19orf54-201ENST00000378313 WT1P19544 449 aaPredicted RBP12.64□□□□□ -0.39
C19orf54-201ENST00000378313 CKS2P33552 79 aa12.64□□□□□ -0.39
C19orf54-201ENST00000378313 LINC01559Q495D7 138 aa12.64□□□□□ -0.39
C19orf54-201ENST00000378313 VGLL1Q99990 258 aa12.64□□□□□ -0.39
C19orf54-201ENST00000378313 COL6A3P12111 3177 aa12.64□□□□□ -0.39
C19orf54-201ENST00000378313 SH2D1AO60880 128 aa12.64□□□□□ -0.39
C19orf54-201ENST00000378313 CEACAM4O75871 244 aa12.64□□□□□ -0.39
C19orf54-201ENST00000378313 NPYP01303 97 aa12.64□□□□□ -0.39
C19orf54-201ENST00000378313 FXYD7P58549 80 aa12.64□□□□□ -0.39
C19orf54-201ENST00000378313 PDE6HQ13956 83 aa12.64□□□□□ -0.39
C19orf54-201ENST00000378313 CCDC144NLQ6NUI1 221 aa12.64□□□□□ -0.39
C19orf54-201ENST00000378313 ASCL5Q7RTU5 278 aa12.64□□□□□ -0.39
C19orf54-201ENST00000378313 PPP1R27Q86WC6 154 aa12.64□□□□□ -0.39
C19orf54-201ENST00000378313 PLXNB1O43157 2135 aa12.63□□□□□ -0.39
C19orf54-201ENST00000378313 DMDP11532 3685 aa12.63□□□□□ -0.39
C19orf54-201ENST00000378313 C19orf67A6NJJ6 358 aa12.63□□□□□ -0.39
C19orf54-201ENST00000378313 C17orf100A8MU93 164 aa12.63□□□□□ -0.39
C19orf54-201ENST00000378313 J3QR89 54 aa12.63□□□□□ -0.39
C19orf54-201ENST00000378313 IGHV1-8P0DP01 117 aa12.63□□□□□ -0.39
C19orf54-201ENST00000378313 GCSHP23434 173 aa12.63□□□□□ -0.39
C19orf54-201ENST00000378313 CNTFRP26992 372 aa12.63□□□□□ -0.39
C19orf54-201ENST00000378313 FCGR2BP31994 310 aaPredicted RBP12.63□□□□□ -0.39
C19orf54-201ENST00000378313 FXYD2P54710 66 aa12.63□□□□□ -0.39
C19orf54-201ENST00000378313 TMEM155Q4W5P6 130 aa12.63□□□□□ -0.39
C19orf54-201ENST00000378313 TCTEX1D4Q5JR98 221 aa12.63□□□□□ -0.39
C19orf54-201ENST00000378313 PHLDA1Q8WV24 401 aaPredicted RBP12.63□□□□□ -0.39
C19orf54-201ENST00000378313 SRSF8Q9BRL6 282 aaKnown RBP12.63□□□□□ -0.39
C19orf54-201ENST00000378313 TMEM178BH3BS89 294 aa12.63□□□□□ -0.39
C19orf54-201ENST00000378313 ZNF207O43670 478 aaKnown RBP12.63□□□□□ -0.39
C19orf54-201ENST00000378313 HLA-DRB4P13762 266 aa12.63□□□□□ -0.39
C19orf54-201ENST00000378313 SPANXB1Q9NS25 103 aaPredicted RBP12.63□□□□□ -0.39
C19orf54-201ENST00000378313 HLA-DRB4X5D2U9 266 aa12.63□□□□□ -0.39
C19orf54-201ENST00000378313 LOXP28300 417 aaPredicted RBP12.62□□□□□ -0.39
C19orf54-201ENST00000378313 CKS1BP61024 79 aa12.62□□□□□ -0.39
C19orf54-201ENST00000378313 PLGLAQ15195 96 aa12.62□□□□□ -0.39
C19orf54-201ENST00000378313 TM2D2Q9BX73 214 aa12.62□□□□□ -0.39
C19orf54-201ENST00000378313 HHLA3Q9XRX5 114 aa12.62□□□□□ -0.39
C19orf54-201ENST00000378313 SRSF1Q07955 248 aaKnown RBP eCLIP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms