RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 FCGR2BP31994 310 aaPredicted RBP8.59□□□□□ -1.03
BEST1-201ENST00000378043 NDPQ00604 133 aa8.59□□□□□ -1.03
BEST1-201ENST00000378043 C5orf64Q2M2E5 130 aa8.59□□□□□ -1.03
BEST1-201ENST00000378043 DYNAPQ8N1N2 210 aa8.59□□□□□ -1.03
BEST1-201ENST00000378043 KLHDC1Q8N7A1 406 aa8.59□□□□□ -1.03
BEST1-201ENST00000378043 OR4F17Q8NGA8 305 aa8.59□□□□□ -1.03
BEST1-201ENST00000378043 TMEM70Q9BUB7 260 aa8.59□□□□□ -1.03
BEST1-201ENST00000378043 LAMTOR2Q9Y2Q5 125 aa8.59□□□□□ -1.03
BEST1-201ENST00000378043 IGLV11-55A0A075B6I3 123 aa8.58□□□□□ -1.04
BEST1-201ENST00000378043 CHEK1O14757 476 aa8.58□□□□□ -1.04
BEST1-201ENST00000378043 ARMS2P0C7Q2 107 aa8.58□□□□□ -1.04
BEST1-201ENST00000378043 LINC00614P0C842 121 aa8.58□□□□□ -1.04
BEST1-201ENST00000378043 TSPOP30536 169 aa8.58□□□□□ -1.04
BEST1-201ENST00000378043 HNRNPA3P51991 378 aaKnown RBP8.58□□□□□ -1.04
BEST1-201ENST00000378043 PSG3Q16557 428 aa8.58□□□□□ -1.04
BEST1-201ENST00000378043 COL5A1-AS1Q5SY13 56 aa8.58□□□□□ -1.04
BEST1-201ENST00000378043 CYB5R2Q6BCY4 276 aa8.58□□□□□ -1.04
BEST1-201ENST00000378043 CHCHD1Q96BP2 118 aaKnown RBP8.58□□□□□ -1.04
BEST1-201ENST00000378043 PSG8Q9UQ74 426 aa8.58□□□□□ -1.04
BEST1-201ENST00000378043 ZFP30Q9Y2G7 519 aa8.58□□□□□ -1.04
BEST1-201ENST00000378043 CELSR1Q9NYQ6 3014 aa8.58□□□□□ -1.04
BEST1-201ENST00000378043 ADORA2A-AS1P86434 159 aa8.58□□□□□ -1.04
BEST1-201ENST00000378043 C21orf62-AS1Q17RA5 79 aa8.58□□□□□ -1.04
BEST1-201ENST00000378043 LYPD1Q8N2G4 141 aa8.58□□□□□ -1.04
BEST1-201ENST00000378043 NDUFB8O95169 186 aa8.57□□□□□ -1.04
BEST1-201ENST00000378043 PRTN3P24158 256 aa8.57□□□□□ -1.04
BEST1-201ENST00000378043 GAGE1Q13065 139 aa8.57□□□□□ -1.04
BEST1-201ENST00000378043 HES1Q14469 280 aa8.57□□□□□ -1.04
BEST1-201ENST00000378043 C11orf71Q6IPW1 123 aa8.57□□□□□ -1.04
BEST1-201ENST00000378043 RAB1BQ9H0U4 201 aa8.57□□□□□ -1.04
BEST1-201ENST00000378043 RNF24Q9Y225 148 aa8.57□□□□□ -1.04
BEST1-201ENST00000378043 LOC105371242A0A075B767 164 aa8.57□□□□□ -1.04
BEST1-201ENST00000378043 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.57□□□□□ -1.04
BEST1-201ENST00000378043 A0A1B0GUT8 65 aa8.57□□□□□ -1.04
BEST1-201ENST00000378043 GNG7O60262 68 aa8.57□□□□□ -1.04
BEST1-201ENST00000378043 CEACAM3P40198 252 aa8.57□□□□□ -1.04
BEST1-201ENST00000378043 TP73-AS1Q9UF72 201 aa8.57□□□□□ -1.04
BEST1-201ENST00000378043 VPS13CQ709C8 3753 aa8.57□□□□□ -1.04
BEST1-201ENST00000378043 SYS1-DBNDD2H3BUS1 97 aa8.56□□□□□ -1.04
BEST1-201ENST00000378043 M0R1W7 72 aa8.56□□□□□ -1.04
BEST1-201ENST00000378043 FAM162BQ5T6X4 162 aa8.56□□□□□ -1.04
BEST1-201ENST00000378043 ZNF562Q6V9R5 426 aa8.56□□□□□ -1.04
BEST1-201ENST00000378043 C8orf49Q96NF6 230 aa8.56□□□□□ -1.04
BEST1-201ENST00000378043 C1RLQ9NZP8 487 aa8.56□□□□□ -1.04
BEST1-201ENST00000378043 MRPS16Q9Y3D3 137 aaKnown RBP8.56□□□□□ -1.04
BEST1-201ENST00000378043 NPIPB5A8MRT5 1133 aa8.56□□□□□ -1.04
BEST1-201ENST00000378043 LEPROTL1O95214 131 aa8.56□□□□□ -1.04
BEST1-201ENST00000378043 NEU4Q8WWR8 484 aaPredicted RBP8.56□□□□□ -1.04
BEST1-201ENST00000378043 GOLT1BQ9Y3E0 138 aa8.56□□□□□ -1.04
BEST1-201ENST00000378043 CHD8Q9HCK8 2581 aa8.55□□□□□ -1.04
BEST1-201ENST00000378043 C20orf202A1L168 122 aa8.55□□□□□ -1.04
BEST1-201ENST00000378043 OR4C46A6NHA9 309 aa8.55□□□□□ -1.04
BEST1-201ENST00000378043 Q8N6K4 173 aa8.55□□□□□ -1.04
BEST1-201ENST00000378043 GATD1Q8NB37 220 aa8.55□□□□□ -1.04
BEST1-201ENST00000378043 ARPC1AQ92747 370 aa8.55□□□□□ -1.04
BEST1-201ENST00000378043 TIMD4Q96H15 378 aa8.55□□□□□ -1.04
BEST1-201ENST00000378043 ZNF48Q96MX3 618 aaPredicted RBP8.55□□□□□ -1.04
BEST1-201ENST00000378043 HIVEP3Q5T1R4 2406 aa8.55□□□□□ -1.04
BEST1-201ENST00000378043 TRAV30A0A087WSZ9 112 aa8.55□□□□□ -1.04
BEST1-201ENST00000378043 K7EQM0 130 aa8.55□□□□□ -1.04
BEST1-201ENST00000378043 IGHV3-23P01764 117 aa8.55□□□□□ -1.04
BEST1-201ENST00000378043 MFAP4P55083 255 aa8.55□□□□□ -1.04
BEST1-201ENST00000378043 TTC9CQ8N5M4 171 aa8.55□□□□□ -1.04
BEST1-201ENST00000378043 TMEM190Q8WZ59 177 aa8.55□□□□□ -1.04
BEST1-201ENST00000378043 TMUB1Q9BVT8 246 aa8.55□□□□□ -1.04
BEST1-201ENST00000378043 PDE6HQ13956 83 aa8.54□□□□□ -1.04
BEST1-201ENST00000378043 MCRIP2Q9BUT9 160 aaKnown RBP8.54□□□□□ -1.04
BEST1-201ENST00000378043 NCOR2Q9Y618 2525 aa8.54□□□□□ -1.04
BEST1-201ENST00000378043 CSN3P07498 182 aa8.54□□□□□ -1.04
BEST1-201ENST00000378043 EGR2P11161 476 aaPredicted RBP8.54□□□□□ -1.04
BEST1-201ENST00000378043 ZFP36P26651 326 aaKnown RBP8.54□□□□□ -1.04
BEST1-201ENST00000378043 HINT1P49773 126 aaPredicted RBP8.54□□□□□ -1.04
BEST1-201ENST00000378043 VMO1Q7Z5L0 202 aa8.54□□□□□ -1.04
BEST1-201ENST00000378043 SPTBN4Q9H254 2564 aa8.53□□□□□ -1.04
BEST1-201ENST00000378043 hDV102S1A0JD36 115 aa8.53□□□□□ -1.04
BEST1-201ENST00000378043 NCBP2LA6PVI3 153 aaKnown RBP8.53□□□□□ -1.04
BEST1-201ENST00000378043 RIGQ13278 110 aa8.53□□□□□ -1.04
BEST1-201ENST00000378043 C21orf62Q9NYP8 219 aa8.53□□□□□ -1.04
BEST1-201ENST00000378043 A0A1W2PPR1 153 aa8.53□□□□□ -1.04
BEST1-201ENST00000378043 CTSGP08311 255 aa8.53□□□□□ -1.04
BEST1-201ENST00000378043 Q6ZVH6 145 aa8.53□□□□□ -1.04
BEST1-201ENST00000378043 TPPP3Q9BW30 176 aa8.53□□□□□ -1.04
BEST1-201ENST00000378043 OR2T8A6NH00 312 aa8.52□□□□□ -1.04
BEST1-201ENST00000378043 IGHG4P01861 327 aa8.52□□□□□ -1.04
BEST1-201ENST00000378043 OR5AL1P0C617 328 aa8.52□□□□□ -1.04
BEST1-201ENST00000378043 EBI3Q14213 229 aa8.52□□□□□ -1.04
BEST1-201ENST00000378043 AAMDCQ9H7C9 122 aa8.52□□□□□ -1.04
BEST1-201ENST00000378043 SMAD5-AS1Q9Y6J3 95 aa8.52□□□□□ -1.04
BEST1-201ENST00000378043 IGKV2-40A0A087WW87 121 aaPredicted RBP8.52□□□□□ -1.05
BEST1-201ENST00000378043 IGKV2D-40P01614 121 aaPredicted RBP8.52□□□□□ -1.05
BEST1-201ENST00000378043 DMRTA1Q5VZB9 504 aa8.52□□□□□ -1.05
BEST1-201ENST00000378043 ZNF493Q6ZR52 646 aa8.52□□□□□ -1.05
BEST1-201ENST00000378043 C1orf122Q6ZSJ8 110 aa8.52□□□□□ -1.05
BEST1-201ENST00000378043 ZNF575Q86XF7 245 aa8.52□□□□□ -1.05
BEST1-201ENST00000378043 IGHV7-81A0A0B4J1V7 117 aa8.52□□□□□ -1.05
BEST1-201ENST00000378043 TMEM213A2RRL7 107 aa8.52□□□□□ -1.05
BEST1-201ENST00000378043 NDUFS7O75251 213 aa8.52□□□□□ -1.05
BEST1-201ENST00000378043 FAM106CPP0CH98 169 aa8.52□□□□□ -1.05
BEST1-201ENST00000378043 FAM106AQ4KMX7 169 aa8.52□□□□□ -1.05
BEST1-201ENST00000378043 LYZL1Q6UWQ5 148 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms