RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 NUP35Q8NFH5 326 aa14.42□□□□□ -0.1
CNTNAP3-204ENST00000377656 DPH3P1Q9H4G8 78 aa14.42□□□□□ -0.1
CNTNAP3-204ENST00000377656 TRGV1A0A0A0MS02 117 aa14.41□□□□□ -0.1
CNTNAP3-204ENST00000377656 C10orf126Q8N4M7 172 aa14.41□□□□□ -0.1
CNTNAP3-204ENST00000377656 SLC25A2Q9BXI2 301 aa14.41□□□□□ -0.1
CNTNAP3-204ENST00000377656 DAZ1Q9NQZ3 744 aaKnown RBP14.41□□□□□ -0.1
CNTNAP3-204ENST00000377656 OVOL3O00110 214 aa14.41□□□□□ -0.1
CNTNAP3-204ENST00000377656 UBE2E1P51965 193 aa14.41□□□□□ -0.1
CNTNAP3-204ENST00000377656 IGFL4Q6B9Z1 124 aa14.41□□□□□ -0.1
CNTNAP3-204ENST00000377656 A0A0U1RRA0 63 aa14.41□□□□□ -0.1
CNTNAP3-204ENST00000377656 MSMBP08118 114 aa14.41□□□□□ -0.1
CNTNAP3-204ENST00000377656 TMEM249Q2WGJ8 235 aa14.4□□□□□ -0.1
CNTNAP3-204ENST00000377656 Q8TCH9 128 aa14.4□□□□□ -0.1
CNTNAP3-204ENST00000377656 TNFSF13O75888 250 aa14.4□□□□□ -0.1
CNTNAP3-204ENST00000377656 CEACAM8P31997 349 aaPredicted RBP14.4□□□□□ -0.1
CNTNAP3-204ENST00000377656 Q6ZR03 302 aa14.4□□□□□ -0.1
CNTNAP3-204ENST00000377656 TMEM86BQ8N661 226 aa14.4□□□□□ -0.1
CNTNAP3-204ENST00000377656 ORAOV1Q8WV07 137 aa14.4□□□□□ -0.1
CNTNAP3-204ENST00000377656 ZNRD1Q9P1U0 126 aa14.4□□□□□ -0.1
CNTNAP3-204ENST00000377656 GATA3P23771 443 aa14.4□□□□□ -0.1
CNTNAP3-204ENST00000377656 SHANK2-AS3Q9BTD1 123 aa14.4□□□□□ -0.1
CNTNAP3-204ENST00000377656 PLA2G2CQ5R387 149 aa14.4□□□□□ -0.1
CNTNAP3-204ENST00000377656 SSC4DQ8WTU2 575 aa14.4□□□□□ -0.1
CNTNAP3-204ENST00000377656 C1QTNF4Q9BXJ3 329 aa14.4□□□□□ -0.1
CNTNAP3-204ENST00000377656 MS4A6AQ9H2W1 248 aa14.4□□□□□ -0.1
CNTNAP3-204ENST00000377656 ANAPC10Q9UM13 185 aa14.4□□□□□ -0.1
CNTNAP3-204ENST00000377656 PAX2Q02962 417 aa14.39□□□□□ -0.11
CNTNAP3-204ENST00000377656 MORN3Q6PF18 240 aaPredicted RBP14.39□□□□□ -0.11
CNTNAP3-204ENST00000377656 MTURNQ8N3F0 131 aa14.39□□□□□ -0.11
CNTNAP3-204ENST00000377656 C1orf147Q96MC9 270 aaPredicted RBP14.39□□□□□ -0.11
CNTNAP3-204ENST00000377656 IGHV3-73A0A0B4J1V6 119 aa14.39□□□□□ -0.11
CNTNAP3-204ENST00000377656 PDE6HQ13956 83 aa14.39□□□□□ -0.11
CNTNAP3-204ENST00000377656 DTX1Q86Y01 620 aa14.39□□□□□ -0.11
CNTNAP3-204ENST00000377656 VCYO14598 125 aa14.39□□□□□ -0.11
CNTNAP3-204ENST00000377656 HOXA3O43365 443 aaPredicted RBP14.39□□□□□ -0.11
CNTNAP3-204ENST00000377656 WISP1O95388 367 aa14.39□□□□□ -0.11
CNTNAP3-204ENST00000377656 DOCK9Q9BZ29 2069 aa14.39□□□□□ -0.11
CNTNAP3-204ENST00000377656 MST1LQ2TV78 715 aa14.39□□□□□ -0.11
CNTNAP3-204ENST00000377656 SPG11Q96JI7 2443 aa14.38□□□□□ -0.11
CNTNAP3-204ENST00000377656 NCOR1P1Q9H4R4 102 aa14.38□□□□□ -0.11
CNTNAP3-204ENST00000377656 ZGRF1Q86YA3 2104 aa14.38□□□□□ -0.11
CNTNAP3-204ENST00000377656 PLXNA2O75051 1894 aa14.38□□□□□ -0.11
CNTNAP3-204ENST00000377656 PRR31Q5SQ13 230 aa14.38□□□□□ -0.11
CNTNAP3-204ENST00000377656 SP5Q6BEB4 398 aaPredicted RBP14.38□□□□□ -0.11
CNTNAP3-204ENST00000377656 VGLL1Q99990 258 aa14.38□□□□□ -0.11
CNTNAP3-204ENST00000377656 PGPEP1Q9NXJ5 209 aa14.38□□□□□ -0.11
CNTNAP3-204ENST00000377656 IGHV3-64A0A075B6Q5 118 aa14.38□□□□□ -0.11
CNTNAP3-204ENST00000377656 C14orf178Q8N769 122 aaPredicted RBP14.38□□□□□ -0.11
CNTNAP3-204ENST00000377656 RNF223E7ERA6 249 aa14.37□□□□□ -0.11
CNTNAP3-204ENST00000377656 RPL35AP18077 110 aaKnown RBP14.37□□□□□ -0.11
CNTNAP3-204ENST00000377656 SYNJ2BPP57105 145 aa14.37□□□□□ -0.11
CNTNAP3-204ENST00000377656 HSD52Q0P140 79 aa14.37□□□□□ -0.11
CNTNAP3-204ENST00000377656 TMEM14BQ9NUH8 114 aa14.37□□□□□ -0.11
CNTNAP3-204ENST00000377656 RNF166Q96A37 237 aaPredicted RBP14.37□□□□□ -0.11
CNTNAP3-204ENST00000377656 INSP01308 110 aa14.36□□□□□ -0.11
CNTNAP3-204ENST00000377656 ANAPC1Q9H1A4 1944 aa14.36□□□□□ -0.11
CNTNAP3-204ENST00000377656 FXYD7P58549 80 aa14.36□□□□□ -0.11
CNTNAP3-204ENST00000377656 TMEM256Q8N2U0 113 aa14.36□□□□□ -0.11
CNTNAP3-204ENST00000377656 LINC00158P58513 81 aa14.36□□□□□ -0.11
CNTNAP3-204ENST00000377656 SEC11AP67812 179 aa14.36□□□□□ -0.11
CNTNAP3-204ENST00000377656 FAM90A2PQ658T7 463 aa14.36□□□□□ -0.11
CNTNAP3-204ENST00000377656 Q86TA4 180 aa14.36□□□□□ -0.11
CNTNAP3-204ENST00000377656 UBE2E2Q96LR5 201 aa14.36□□□□□ -0.11
CNTNAP3-204ENST00000377656 FNDC4Q9H6D8 234 aaPredicted RBP14.36□□□□□ -0.11
CNTNAP3-204ENST00000377656 ATP6V0E1O15342 81 aa14.35□□□□□ -0.11
CNTNAP3-204ENST00000377656 RUSC1-AS1Q66K80 236 aa14.35□□□□□ -0.11
CNTNAP3-204ENST00000377656 FAM110DQ8TAY7 271 aaPredicted RBP14.35□□□□□ -0.11
CNTNAP3-204ENST00000377656 ZNF524Q96C55 264 aa14.35□□□□□ -0.11
CNTNAP3-204ENST00000377656 LINC00479Q96M42 142 aa14.35□□□□□ -0.11
CNTNAP3-204ENST00000377656 RNF114Q9Y508 228 aa14.35□□□□□ -0.11
CNTNAP3-204ENST00000377656 IGHV4-39P01824 125 aa14.35□□□□□ -0.11
CNTNAP3-204ENST00000377656 IGHV3-53P01767 116 aa14.35□□□□□ -0.11
CNTNAP3-204ENST00000377656 OR5A1Q8NGJ0 315 aa14.35□□□□□ -0.11
CNTNAP3-204ENST00000377656 NDUFA4L2Q9NRX3 87 aa14.35□□□□□ -0.11
CNTNAP3-204ENST00000377656 A6NNC1 897 aa14.34□□□□□ -0.11
CNTNAP3-204ENST00000377656 TMEM238C9JI98 176 aa14.34□□□□□ -0.11
CNTNAP3-204ENST00000377656 PCP4P48539 62 aa14.34□□□□□ -0.11
CNTNAP3-204ENST00000377656 TEX43Q6ZNM6 134 aa14.34□□□□□ -0.11
CNTNAP3-204ENST00000377656 TRAV8-2A0A0B4J237 113 aa14.34□□□□□ -0.11
CNTNAP3-204ENST00000377656 NDUFB8O95169 186 aa14.34□□□□□ -0.11
CNTNAP3-204ENST00000377656 LOXP28300 417 aaPredicted RBP14.34□□□□□ -0.11
CNTNAP3-204ENST00000377656 CKS1BP61024 79 aa14.34□□□□□ -0.11
CNTNAP3-204ENST00000377656 YPEL3P61236 119 aaPredicted RBP14.34□□□□□ -0.11
CNTNAP3-204ENST00000377656 DMRTC2Q8IXT2 367 aaPredicted RBP14.34□□□□□ -0.11
CNTNAP3-204ENST00000377656 ZNF479Q96JC4 524 aa14.34□□□□□ -0.11
CNTNAP3-204ENST00000377656 WDR86Q86TI4 376 aa14.34□□□□□ -0.11
CNTNAP3-204ENST00000377656 IGHV1-69DA0A0B4J2H0 117 aa14.34□□□□□ -0.11
CNTNAP3-204ENST00000377656 IGHV1-69P01742 117 aa14.34□□□□□ -0.11
CNTNAP3-204ENST00000377656 OR2K2Q8NGT1 345 aa14.34□□□□□ -0.11
CNTNAP3-204ENST00000377656 LSM4Q9Y4Z0 139 aaKnown RBP14.34□□□□□ -0.11
CNTNAP3-204ENST00000377656 CSTL1Q9H114 145 aa14.33□□□□□ -0.11
CNTNAP3-204ENST00000377656 DEFB104AQ8WTQ1 72 aa14.33□□□□□ -0.12
CNTNAP3-204ENST00000377656 PLEKHB2Q96CS7 222 aa14.33□□□□□ -0.12
CNTNAP3-204ENST00000377656 MRPL27Q9P0M9 148 aaKnown RBP14.33□□□□□ -0.12
CNTNAP3-204ENST00000377656 ZNF503-AS2A6NEH8 195 aa14.33□□□□□ -0.12
CNTNAP3-204ENST00000377656 IGLV1-44P01699 117 aa14.33□□□□□ -0.12
CNTNAP3-204ENST00000377656 RIPPLY3P57055 190 aa14.33□□□□□ -0.12
CNTNAP3-204ENST00000377656 TMEM95Q3KNT9 176 aa14.33□□□□□ -0.12
CNTNAP3-204ENST00000377656 DEFB131AP59861 70 aa14.33□□□□□ -0.12
CNTNAP3-204ENST00000377656 AMN1Q8IY45 258 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms