RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 Q71RC1 249 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 PRSS33Q8NF86 280 aa11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 SPENQ96T58 3664 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 SYS1-DBNDD2H3BUS1 97 aa11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 SCGB2A1O75556 95 aa11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 S100A4P26447 101 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 GRNP28799 593 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 OR10AG1Q8NH19 301 aa11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 PRELID3AQ96N28 172 aa11.51□□□□□ -0.57
TNFRSF1B-201ENST00000376259 D6R8Y8 96 aa11.5□□□□□ -0.57
TNFRSF1B-201ENST00000376259 SMIM15Q7Z3B0 74 aa11.5□□□□□ -0.57
TNFRSF1B-201ENST00000376259 C8orf46Q8TAG6 207 aa11.5□□□□□ -0.57
TNFRSF1B-201ENST00000376259 C8orf49Q96NF6 230 aa11.5□□□□□ -0.57
TNFRSF1B-201ENST00000376259 IFI27P40305 119 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1B-201ENST00000376259 Q6ZS92 163 aa11.5□□□□□ -0.57
TNFRSF1B-201ENST00000376259 ZNF833PQ6ZTB9 187 aa11.5□□□□□ -0.57
TNFRSF1B-201ENST00000376259 FMC1Q96HJ9 113 aa11.5□□□□□ -0.57
TNFRSF1B-201ENST00000376259 POLQO75417 2590 aa11.5□□□□□ -0.57
TNFRSF1B-201ENST00000376259 PCSK5Q92824 1860 aa11.49□□□□□ -0.57
TNFRSF1B-201ENST00000376259 COL4A2P08572 1712 aa11.49□□□□□ -0.57
TNFRSF1B-201ENST00000376259 IGHV1-24A0A0C4DH33 117 aa11.49□□□□□ -0.57
TNFRSF1B-201ENST00000376259 GAGE10A6NGK3 116 aa11.49□□□□□ -0.57
TNFRSF1B-201ENST00000376259 PRSS57Q6UWY2 283 aa11.49□□□□□ -0.57
TNFRSF1B-201ENST00000376259 CGB3P0DN86 165 aa11.49□□□□□ -0.57
TNFRSF1B-201ENST00000376259 CGB7P0DN87 165 aa11.49□□□□□ -0.57
TNFRSF1B-201ENST00000376259 APOBEC3AP31941 199 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF1B-201ENST00000376259 LYZL1Q6UWQ5 148 aa11.49□□□□□ -0.57
TNFRSF1B-201ENST00000376259 ZFYVE26Q68DK2 2539 aa11.49□□□□□ -0.57
TNFRSF1B-201ENST00000376259 SPRY2O43597 315 aa11.48□□□□□ -0.57
TNFRSF1B-201ENST00000376259 HLA-DMBP28068 263 aa11.48□□□□□ -0.57
TNFRSF1B-201ENST00000376259 CEACAM3P40198 252 aa11.48□□□□□ -0.57
TNFRSF1B-201ENST00000376259 SFTA2Q6UW10 78 aa11.48□□□□□ -0.57
TNFRSF1B-201ENST00000376259 GTSF1Q8WW33 167 aa11.48□□□□□ -0.57
TNFRSF1B-201ENST00000376259 ATP5IP56385 69 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF1B-201ENST00000376259 S100A7AQ86SG5 101 aa11.48□□□□□ -0.57
TNFRSF1B-201ENST00000376259 IGF2BP2-AS1Q96M15 143 aa11.48□□□□□ -0.57
TNFRSF1B-201ENST00000376259 RAB1BQ9H0U4 201 aa11.48□□□□□ -0.57
TNFRSF1B-201ENST00000376259 H3BUT2 72 aa11.48□□□□□ -0.57
TNFRSF1B-201ENST00000376259 CCL25O15444 150 aa11.48□□□□□ -0.57
TNFRSF1B-201ENST00000376259 MFAP4P55083 255 aa11.48□□□□□ -0.57
TNFRSF1B-201ENST00000376259 DPM3Q9P2X0 92 aa11.48□□□□□ -0.57
TNFRSF1B-201ENST00000376259 TRAV8-6A0A0B4J262 113 aa11.47□□□□□ -0.57
TNFRSF1B-201ENST00000376259 IGLC7A0M8Q6 106 aa11.47□□□□□ -0.57
TNFRSF1B-201ENST00000376259 GATA4P43694 442 aa11.47□□□□□ -0.57
TNFRSF1B-201ENST00000376259 TMEM249Q2WGJ8 235 aa11.47□□□□□ -0.57
TNFRSF1B-201ENST00000376259 C12orf54Q6X4T0 127 aa11.47□□□□□ -0.57
TNFRSF1B-201ENST00000376259 WFDC12Q8WWY7 111 aa11.47□□□□□ -0.57
TNFRSF1B-201ENST00000376259 OTORQ9NRC9 128 aa11.47□□□□□ -0.57
TNFRSF1B-201ENST00000376259 CENPEQ02224 2701 aa11.47□□□□□ -0.57
TNFRSF1B-201ENST00000376259 HIVEP3Q5T1R4 2406 aa11.47□□□□□ -0.57
TNFRSF1B-201ENST00000376259 Q86TA4 180 aa11.47□□□□□ -0.57
TNFRSF1B-201ENST00000376259 C21orf62Q9NYP8 219 aa11.47□□□□□ -0.57
TNFRSF1B-201ENST00000376259 ZNF672Q499Z4 452 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1B-201ENST00000376259 BUB1B-PAK6H3BSN5 160 aa11.46□□□□□ -0.57
TNFRSF1B-201ENST00000376259 POU2AF1Q16633 256 aa11.46□□□□□ -0.57
TNFRSF1B-201ENST00000376259 ZNF414Q96IQ9 312 aa11.46□□□□□ -0.57
TNFRSF1B-201ENST00000376259 TMEM160Q9NX00 188 aa11.46□□□□□ -0.57
TNFRSF1B-201ENST00000376259 SPANXN1Q5VSR9 72 aa11.46□□□□□ -0.58
TNFRSF1B-201ENST00000376259 IGKV1D-37A0A075B6S9 117 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 HTN1P15515 57 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 GUSBP1Q15486 140 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 TMEM155Q4W5P6 130 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 BCL6BQ8N143 479 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 RNASE8Q8TDE3 154 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 MRPL27Q9P0M9 148 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 MYO18BQ8IUG5 2567 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 AKAP13Q12802 2813 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 LOC105371242A0A075B767 164 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 VWC2LB2RUY7 222 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 GLMPQ8WWB7 406 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 TRGV9Q99603 122 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 CHODLQ9H9P2 273 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 COX11Q9Y6N1 276 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 K7EMI3 77 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 NBR2O15453 112 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 TOMM40O96008 361 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 MGPP08493 103 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 RIPPLY3P57055 190 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 ERCC8Q13216 396 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 CLEC19AQ6UXS0 136 aa11.45□□□□□ -0.58
TNFRSF1B-201ENST00000376259 B9A039 149 aa11.44□□□□□ -0.58
TNFRSF1B-201ENST00000376259 NDPQ00604 133 aa11.44□□□□□ -0.58
TNFRSF1B-201ENST00000376259 LY6EQ16553 131 aa11.44□□□□□ -0.58
TNFRSF1B-201ENST00000376259 RNF182Q8N6D2 247 aa11.44□□□□□ -0.58
TNFRSF1B-201ENST00000376259 PPP1R14DQ9NXH3 145 aa11.44□□□□□ -0.58
TNFRSF1B-201ENST00000376259 ITGB1BP1O14713 200 aa11.44□□□□□ -0.58
TNFRSF1B-201ENST00000376259 PRO3102Q9H379 93 aa11.44□□□□□ -0.58
TNFRSF1B-201ENST00000376259 A0A1B0GWJ7 208 aa11.44□□□□□ -0.58
TNFRSF1B-201ENST00000376259 NDUFS7O75251 213 aa11.44□□□□□ -0.58
TNFRSF1B-201ENST00000376259 CEACAM8P31997 349 aaPredicted RBP11.44□□□□□ -0.58
TNFRSF1B-201ENST00000376259 ZZEF1O43149 2961 aa11.43□□□□□ -0.58
TNFRSF1B-201ENST00000376259 M0R381 172 aa11.43□□□□□ -0.58
TNFRSF1B-201ENST00000376259 THBDP07204 575 aa11.43□□□□□ -0.58
TNFRSF1B-201ENST00000376259 IGLC1P0CG04 106 aa11.43□□□□□ -0.58
TNFRSF1B-201ENST00000376259 UBE2V1Q13404 147 aa11.43□□□□□ -0.58
TNFRSF1B-201ENST00000376259 ORMDL3Q8N138 153 aa11.43□□□□□ -0.58
TNFRSF1B-201ENST00000376259 FAM106CPP0CH98 169 aa11.43□□□□□ -0.58
TNFRSF1B-201ENST00000376259 FAM106AQ4KMX7 169 aa11.43□□□□□ -0.58
TNFRSF1B-201ENST00000376259 F5H697 171 aa11.42□□□□□ -0.58
TNFRSF1B-201ENST00000376259 IGKV3-20P01619 116 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms