RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 OR5AL1P0C617 328 aa6.8□□□□□ -1.32
SNRNP40-202ENST00000373720 ADMP35318 185 aa6.8□□□□□ -1.32
SNRNP40-202ENST00000373720 C9orf139Q6ZV77 190 aa6.8□□□□□ -1.32
SNRNP40-202ENST00000373720 MRPL52Q86TS9 123 aaKnown RBP6.8□□□□□ -1.32
SNRNP40-202ENST00000373720 NUP35Q8NFH5 326 aa6.8□□□□□ -1.32
SNRNP40-202ENST00000373720 GSN-AS1Q9NRJ2 163 aa6.8□□□□□ -1.32
SNRNP40-202ENST00000373720 AURKAIP1Q9NWT8 199 aaPredicted RBP6.8□□□□□ -1.32
SNRNP40-202ENST00000373720 HIVEP3Q5T1R4 2406 aa6.8□□□□□ -1.32
SNRNP40-202ENST00000373720 DCHS1Q96JQ0 3298 aa6.8□□□□□ -1.32
SNRNP40-202ENST00000373720 ADGRG4Q8IZF6 3080 aa6.79□□□□□ -1.32
SNRNP40-202ENST00000373720 IGHV4-61A0A0C4DH41 118 aa6.79□□□□□ -1.32
SNRNP40-202ENST00000373720 A6NDX4 124 aa6.79□□□□□ -1.32
SNRNP40-202ENST00000373720 F2Z2F3 143 aa6.79□□□□□ -1.32
SNRNP40-202ENST00000373720 K7EMT4 169 aa6.79□□□□□ -1.32
SNRNP40-202ENST00000373720 IGLV2-11P01706 119 aa6.79□□□□□ -1.32
SNRNP40-202ENST00000373720 DLX1P56177 255 aa6.79□□□□□ -1.32
SNRNP40-202ENST00000373720 NDPQ00604 133 aa6.79□□□□□ -1.32
SNRNP40-202ENST00000373720 FOXE3Q13461 319 aa6.79□□□□□ -1.32
SNRNP40-202ENST00000373720 GOLT1AQ6ZVE7 132 aa6.79□□□□□ -1.32
SNRNP40-202ENST00000373720 SIGLECL1Q8N7X8 197 aa6.79□□□□□ -1.32
SNRNP40-202ENST00000373720 CHCHD1Q96BP2 118 aaKnown RBP6.79□□□□□ -1.32
SNRNP40-202ENST00000373720 NEU1Q99519 415 aa6.79□□□□□ -1.32
SNRNP40-202ENST00000373720 ASCL2Q99929 193 aa6.79□□□□□ -1.32
SNRNP40-202ENST00000373720 FAM103A1Q9BTL3 118 aaKnown RBP6.79□□□□□ -1.32
SNRNP40-202ENST00000373720 U3KQE9 123 aa6.79□□□□□ -1.32
SNRNP40-202ENST00000373720 COL6A6A6NMZ7 2263 aa6.79□□□□□ -1.32
SNRNP40-202ENST00000373720 A0A1B0GUT8 65 aa6.78□□□□□ -1.32
SNRNP40-202ENST00000373720 OR2T8A6NH00 312 aa6.78□□□□□ -1.32
SNRNP40-202ENST00000373720 APELAP0DMC3 54 aa6.78□□□□□ -1.32
SNRNP40-202ENST00000373720 HNF1AP20823 631 aa6.78□□□□□ -1.32
SNRNP40-202ENST00000373720 CBLN1P23435 193 aa6.78□□□□□ -1.32
SNRNP40-202ENST00000373720 RAB4BP61018 213 aa6.78□□□□□ -1.32
SNRNP40-202ENST00000373720 CLEC12BQ2HXU8 276 aa6.78□□□□□ -1.32
SNRNP40-202ENST00000373720 PSMG4Q5JS54 123 aa6.78□□□□□ -1.32
SNRNP40-202ENST00000373720 PIFOQ8TCI5 191 aa6.78□□□□□ -1.32
SNRNP40-202ENST00000373720 LINC00479Q96M42 142 aa6.78□□□□□ -1.32
SNRNP40-202ENST00000373720 MS4A10Q96PG2 267 aa6.78□□□□□ -1.32
SNRNP40-202ENST00000373720 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 IGHV3-21A0A0B4J1V1 117 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 C20orf202A1L168 122 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 ZNF785A8K8V0 405 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 FABP5P3A8MUU1 101 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 CHEK1O14757 476 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 GPX1P07203 203 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 GZMBP10144 247 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 CD24P25063 80 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 PPIFP30405 207 aaKnown RBP6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 HIST1H1AQ02539 215 aaPredicted RBP6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 PMCHL1Q16048 86 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 ECSCRQ19T08 205 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 RUSC1-AS1Q66K80 236 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 ZNF493Q6ZR52 646 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 PRNTQ86SH4 94 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 OR2D3Q8NGH3 330 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 KCNS1Q96KK3 526 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 PRR25Q96S07 402 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 HSPB9Q9BQS6 159 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 SAMD10Q9BYL1 202 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 PRDM13Q9H4Q3 707 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 LAMTOR2Q9Y2Q5 125 aa6.77□□□□□ -1.33
SNRNP40-202ENST00000373720 NAV3Q8IVL0 2385 aa6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 IGHV4-30-2A0A087WSY4 118 aa6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 TRAV34A0A0B4J273 112 aa6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 TRAV40A0A0B4J280 105 aa6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 IGLV1-40P01703 118 aa6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 PPBPP02775 128 aa6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 TRGV3P03979 118 aa6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 GPR183P32249 361 aa6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 GNG5P63218 68 aa6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 KLF17Q5JT82 389 aaPredicted RBP6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 FAM120AOSQ5T036 256 aa6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 LEMD1Q68G75 181 aa6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 LCN12Q6JVE5 192 aa6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 PRR27Q6MZM9 219 aa6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 EXOC3-AS1Q8N2X6 119 aa6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 LINC00477Q96M19 166 aa6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 ALKBH7Q9BT30 221 aaPredicted RBP6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 GSX1Q9H4S2 264 aaPredicted RBP6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 NCOR2Q9Y618 2525 aa6.76□□□□□ -1.33
SNRNP40-202ENST00000373720 DOPEY1Q5JWR5 2465 aa6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 TMEM189A5PLL7 270 aa6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 SH2D7A6NKC9 451 aaPredicted RBP6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 OVOL1O14753 267 aa6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 ZNF324O75467 553 aaPredicted RBP6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 ARL3P36405 182 aa6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 SLC35B1P78383 322 aa6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 PRB3Q04118 309 aaPredicted RBP6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 SCGB2A2Q13296 93 aa6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 FAM106AQ4KMX7 169 aa6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 TMEM78Q5T7P6 136 aa6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 GFI1BQ5VTD9 330 aa6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 MRPL54Q6P161 138 aaKnown RBP6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 C9orf47Q6ZRZ4 202 aa6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 GPHB5Q86YW7 130 aa6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 ZNF843Q8N446 348 aa6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 TMEM86BQ8N661 226 aa6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 WFDC12Q8WWY7 111 aa6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 CCDC140Q96MF4 163 aa6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 CNFNQ9BYD5 112 aa6.75□□□□□ -1.33
SNRNP40-202ENST00000373720 GNB4Q9HAV0 340 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms