RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 TMEM136Q6ZRR5 245 aa18.39■□□□□ 0.54
SNX21-204ENST00000372542 LRRC75A-AS1Q8N1F1 130 aa18.39■□□□□ 0.54
SNX21-204ENST00000372542 ZNF331Q9NQX6 463 aaPredicted RBP18.39■□□□□ 0.54
SNX21-204ENST00000372542 A8MWL6 223 aa18.39■□□□□ 0.53
SNX21-204ENST00000372542 TRGV3P03979 118 aa18.39■□□□□ 0.53
SNX21-204ENST00000372542 OR4B1Q8NGF8 309 aa18.39■□□□□ 0.53
SNX21-204ENST00000372542 PACRGQ96M98 296 aaPredicted RBP18.39■□□□□ 0.53
SNX21-204ENST00000372542 PSG8Q9UQ74 426 aa18.39■□□□□ 0.53
SNX21-204ENST00000372542 SPG11Q96JI7 2443 aa18.38■□□□□ 0.53
SNX21-204ENST00000372542 FBLL1A6NHQ2 334 aaKnown RBP18.38■□□□□ 0.53
SNX21-204ENST00000372542 SPINK4O60575 86 aa18.38■□□□□ 0.53
SNX21-204ENST00000372542 A0A087X0K7 114 aa18.37■□□□□ 0.53
SNX21-204ENST00000372542 SLC35B1P78383 322 aa18.37■□□□□ 0.53
SNX21-204ENST00000372542 S100A12P80511 92 aa18.37■□□□□ 0.53
SNX21-204ENST00000372542 C1orf194Q5T5A4 169 aa18.37■□□□□ 0.53
SNX21-204ENST00000372542 MRPL54Q6P161 138 aaKnown RBP18.37■□□□□ 0.53
SNX21-204ENST00000372542 LINC00322Q6ZN03 302 aaPredicted RBP18.37■□□□□ 0.53
SNX21-204ENST00000372542 ATP5L2Q7Z4Y8 100 aa18.37■□□□□ 0.53
SNX21-204ENST00000372542 GBGT1Q8N5D6 347 aa18.37■□□□□ 0.53
SNX21-204ENST00000372542 NUP35Q8NFH5 326 aa18.37■□□□□ 0.53
SNX21-204ENST00000372542 NEU1Q99519 415 aa18.37■□□□□ 0.53
SNX21-204ENST00000372542 GFRA4Q9GZZ7 299 aa18.37■□□□□ 0.53
SNX21-204ENST00000372542 NIT2Q9NQR4 276 aa18.37■□□□□ 0.53
SNX21-204ENST00000372542 IGHV3-35A0A0C4DH35 117 aa18.37■□□□□ 0.53
SNX21-204ENST00000372542 NPIPB6E9PJ23 425 aa18.37■□□□□ 0.53
SNX21-204ENST00000372542 BUB3O43684 328 aa18.37■□□□□ 0.53
SNX21-204ENST00000372542 AMBPP02760 352 aa18.37■□□□□ 0.53
SNX21-204ENST00000372542 FRMD6-AS1P0C7T7 363 aa18.37■□□□□ 0.53
SNX21-204ENST00000372542 USMG5Q96IX5 58 aa18.37■□□□□ 0.53
SNX21-204ENST00000372542 SMAD5-AS1Q9Y6J3 95 aa18.37■□□□□ 0.53
SNX21-204ENST00000372542 ASH1LQ9NR48 2969 aaKnown RBP18.37■□□□□ 0.53
SNX21-204ENST00000372542 FAM231BA6NCW3 169 aa18.36■□□□□ 0.53
SNX21-204ENST00000372542 CRISP2P16562 243 aa18.36■□□□□ 0.53
SNX21-204ENST00000372542 PYY3Q5JQD4 70 aa18.36■□□□□ 0.53
SNX21-204ENST00000372542 CIARTQ8N365 385 aaPredicted RBP18.36■□□□□ 0.53
SNX21-204ENST00000372542 TMEM18Q96B42 140 aa18.36■□□□□ 0.53
SNX21-204ENST00000372542 LINC00527Q9UJ94 153 aa18.36■□□□□ 0.53
SNX21-204ENST00000372542 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.36■□□□□ 0.531e-7■■■■□ 20.8
SNX21-204ENST00000372542 ZFYVE26Q68DK2 2539 aa18.35■□□□□ 0.53
SNX21-204ENST00000372542 PCP4L1A6NKN8 68 aa18.35■□□□□ 0.53
SNX21-204ENST00000372542 HIGD1CA8MV81 97 aa18.35■□□□□ 0.53
SNX21-204ENST00000372542 M0R3E3 92 aa18.35■□□□□ 0.53
SNX21-204ENST00000372542 PPIFP30405 207 aaKnown RBP18.35■□□□□ 0.53
SNX21-204ENST00000372542 DEFB113Q30KQ7 82 aa18.35■□□□□ 0.53
SNX21-204ENST00000372542 METTL26Q96S19 204 aa18.35■□□□□ 0.53
SNX21-204ENST00000372542 ZNF580Q9UK33 172 aa18.35■□□□□ 0.53
SNX21-204ENST00000372542 TGFAP01135 160 aa18.35■□□□□ 0.53
SNX21-204ENST00000372542 COL8A1P27658 744 aa18.35■□□□□ 0.53
SNX21-204ENST00000372542 TPPP2P59282 170 aa18.35■□□□□ 0.53
SNX21-204ENST00000372542 RAB4BP61018 213 aa18.35■□□□□ 0.53
SNX21-204ENST00000372542 DNLZQ5SXM8 178 aa18.35■□□□□ 0.53
SNX21-204ENST00000372542 UBR5O95071 2799 aaPredicted RBP18.34■□□□□ 0.53
SNX21-204ENST00000372542 CLPSL1A2RUU4 121 aa18.34■□□□□ 0.53
SNX21-204ENST00000372542 Q0VG73 95 aa18.33■□□□□ 0.53
SNX21-204ENST00000372542 C16orf54Q6UWD8 224 aa18.33■□□□□ 0.53
SNX21-204ENST00000372542 IGHV3OR16-8A0A075B7F1 116 aa18.33■□□□□ 0.52
SNX21-204ENST00000372542 ZNF785A8K8V0 405 aa18.33■□□□□ 0.52
SNX21-204ENST00000372542 KRTAP10-9P60411 292 aa18.33■□□□□ 0.52
SNX21-204ENST00000372542 RNF223E7ERA6 249 aa18.32■□□□□ 0.52
SNX21-204ENST00000372542 ZC2HC1AQ96GY0 325 aa18.32■□□□□ 0.52
SNX21-204ENST00000372542 SLC50A1Q9BRV3 221 aa18.32■□□□□ 0.52
SNX21-204ENST00000372542 U3KQE9 123 aa18.32■□□□□ 0.52
SNX21-204ENST00000372542 APCSP02743 223 aa18.31■□□□□ 0.52
SNX21-204ENST00000372542 ARL3P36405 182 aa18.31■□□□□ 0.52
SNX21-204ENST00000372542 BLCAPP62952 87 aa18.31■□□□□ 0.52
SNX21-204ENST00000372542 DEFB112Q30KQ8 113 aa18.31■□□□□ 0.52
SNX21-204ENST00000372542 GRIFINA4D1Z8 144 aa18.3■□□□□ 0.52
SNX21-204ENST00000372542 RBPMS2Q6ZRY4 209 aaKnown RBP18.3■□□□□ 0.52
SNX21-204ENST00000372542 NOL4LQ96MY1 436 aaPredicted RBP18.3■□□□□ 0.52
SNX21-204ENST00000372542 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.3■□□□□ 0.52
SNX21-204ENST00000372542 A0A1B0GXF2 115 aa18.3■□□□□ 0.52
SNX21-204ENST00000372542 CHEK1O14757 476 aa18.3■□□□□ 0.52
SNX21-204ENST00000372542 CT45A10P0DMU9 189 aa18.3■□□□□ 0.52
SNX21-204ENST00000372542 IGHV4-31P0DP07 118 aa18.3■□□□□ 0.52
SNX21-204ENST00000372542 ESDP10768 282 aa18.3■□□□□ 0.52
SNX21-204ENST00000372542 SAPCD1Q5SSQ6 148 aa18.3■□□□□ 0.52
SNX21-204ENST00000372542 TCF24Q7RTU0 167 aa18.3■□□□□ 0.52
SNX21-204ENST00000372542 COX8CQ7Z4L0 72 aa18.3■□□□□ 0.52
SNX21-204ENST00000372542 OR2D3Q8NGH3 330 aa18.3■□□□□ 0.52
SNX21-204ENST00000372542 OR5R1Q8NH85 324 aa18.3■□□□□ 0.52
SNX21-204ENST00000372542 FAM208BQ5VWN6 2430 aa18.29■□□□□ 0.52
SNX21-204ENST00000372542 OR10J3Q5JRS4 329 aa18.29■□□□□ 0.52
SNX21-204ENST00000372542 Q5PR19 223 aa18.29■□□□□ 0.52
SNX21-204ENST00000372542 TMEM256Q8N2U0 113 aa18.29■□□□□ 0.52
SNX21-204ENST00000372542 A0A0G2JLM5 398 aa18.28■□□□□ 0.52
SNX21-204ENST00000372542 NDUFA4O00483 81 aa18.28■□□□□ 0.52
SNX21-204ENST00000372542 IGLV1-40P01703 118 aa18.28■□□□□ 0.52
SNX21-204ENST00000372542 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.28■□□□□ 0.52
SNX21-204ENST00000372542 GTSF1Q8WW33 167 aa18.28■□□□□ 0.52
SNX21-204ENST00000372542 FSHBP01225 129 aa18.28■□□□□ 0.52
SNX21-204ENST00000372542 HBBP68871 147 aa18.28■□□□□ 0.52
SNX21-204ENST00000372542 PF4V1P10720 104 aa18.27■□□□□ 0.52
SNX21-204ENST00000372542 FOXA3P55318 350 aaPredicted RBP18.27■□□□□ 0.52
SNX21-204ENST00000372542 C9orf139Q6ZV77 190 aa18.27■□□□□ 0.52
SNX21-204ENST00000372542 BAGE3Q86Y29 109 aa18.27■□□□□ 0.52
SNX21-204ENST00000372542 TP53TG3Q9ULZ0 132 aa18.27■□□□□ 0.52
SNX21-204ENST00000372542 IGHV4-59P01825 116 aa18.26■□□□□ 0.51
SNX21-204ENST00000372542 IGHG4P01861 327 aa18.26■□□□□ 0.51
SNX21-204ENST00000372542 CFHR3Q02985 330 aa18.26■□□□□ 0.51
SNX21-204ENST00000372542 JOSD1Q15040 202 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms