RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 C10orf113Q5VZT2 155 aa7.02□□□□□ -1.29
SMARCA1-203ENST00000371123 MOB1BQ7L9L4 216 aa7.02□□□□□ -1.29
SMARCA1-203ENST00000371123 PDPNQ86YL7 162 aa7.02□□□□□ -1.29
SMARCA1-203ENST00000371123 CDIP1Q9H305 208 aa7.02□□□□□ -1.29
SMARCA1-203ENST00000371123 SLC25A10Q9UBX3 287 aaPredicted RBP7.02□□□□□ -1.29
SMARCA1-203ENST00000371123 NDUFB3O43676 98 aa7.02□□□□□ -1.29
SMARCA1-203ENST00000371123 PAX8Q06710 450 aa7.02□□□□□ -1.29
SMARCA1-203ENST00000371123 ARPC1AQ92747 370 aa7.02□□□□□ -1.29
SMARCA1-203ENST00000371123 MRPL20Q9BYC9 149 aaKnown RBP7.02□□□□□ -1.29
SMARCA1-203ENST00000371123 UFC1Q9Y3C8 167 aa7.02□□□□□ -1.29
SMARCA1-203ENST00000371123 PRRG2O14669 202 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 TSPAN13O95857 204 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 SEC11AP67812 179 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 CD300EQ496F6 205 aaPredicted RBP7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 CFAP161Q6P656 301 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 ZNF329Q86UD4 541 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 FBXL15Q9H469 300 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 SRRM4A7MD48 611 aaKnown RBP7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 SPRY2O43597 315 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 SMIM17P0DL12 118 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 CT45A6P0DMU7 189 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 CT45A5P0DMU8 189 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 CT45A7P0DMV0 189 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 CT45A1Q5HYN5 189 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 PATE2Q6UY27 113 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 FAM231DQ6ZW35 169 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 CT45A3Q8NHU0 189 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 SRSF12Q8WXF0 261 aaKnown RBP7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 RPEQ96AT9 228 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 GRAMD2BQ96HH9 432 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 C20orf78Q9BR46 151 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 P01737 135 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 ORM1P02763 201 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 MYCNOSP40205 109 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 PRSS22Q9GZN4 317 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 MS4A6AQ9H2W1 248 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 RNF7Q9UBF6 113 aa7.01□□□□□ -1.29
SMARCA1-203ENST00000371123 MPDU1O75352 247 aa7□□□□□ -1.29
SMARCA1-203ENST00000371123 RASL11AQ6T310 242 aa7□□□□□ -1.29
SMARCA1-203ENST00000371123 FA2HQ7L5A8 372 aa7□□□□□ -1.29
SMARCA1-203ENST00000371123 MLST8Q9BVC4 326 aa7□□□□□ -1.29
SMARCA1-203ENST00000371123 TGFAP01135 160 aa7□□□□□ -1.29
SMARCA1-203ENST00000371123 HSPE1P61604 102 aaKnown RBP7□□□□□ -1.29
SMARCA1-203ENST00000371123 TIMM23BQ5SRD1 257 aa7□□□□□ -1.29
SMARCA1-203ENST00000371123 LINC00305Q7Z4B0 112 aa7□□□□□ -1.29
SMARCA1-203ENST00000371123 FAM90A1Q86YD7 464 aa7□□□□□ -1.29
SMARCA1-203ENST00000371123 C11orf53Q8IXP5 236 aa7□□□□□ -1.29
SMARCA1-203ENST00000371123 EXOC3-AS1Q8N2X6 119 aa7□□□□□ -1.29
SMARCA1-203ENST00000371123 UBTD1Q9HAC8 227 aa7□□□□□ -1.29
SMARCA1-203ENST00000371123 ADH4P08319 380 aa7□□□□□ -1.29
SMARCA1-203ENST00000371123 CT45A10P0DMU9 189 aa7□□□□□ -1.29
SMARCA1-203ENST00000371123 ECSCRQ19T08 205 aa7□□□□□ -1.29
SMARCA1-203ENST00000371123 PET117Q6UWS5 81 aa7□□□□□ -1.29
SMARCA1-203ENST00000371123 LCNL1Q6ZST4 164 aa7□□□□□ -1.29
SMARCA1-203ENST00000371123 BPIFA4PQ86YQ2 179 aa7□□□□□ -1.29
SMARCA1-203ENST00000371123 C15orf65H3BRN8 121 aa6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 AMTNQ6UX39 209 aa6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 GTF2H5Q6ZYL4 71 aa6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 CHCHD1Q96BP2 118 aaKnown RBP6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 SLC25A33Q9BSK2 321 aa6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 MRPL36Q9P0J6 103 aaKnown RBP6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 LINC00312Q9Y6C7 94 aa6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 FASNP49327 2511 aaKnown RBP6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 E7EUB6 86 aa6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 PRSS1P07477 247 aa6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 SAA1P0DJI8 122 aaPredicted RBP6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 SMCPP49901 116 aaPredicted RBP6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 AGRNO00468 2067 aa6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 AKAP13Q12802 2813 aa6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 C19orf71A6NCJ1 209 aa6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 ZNF146Q15072 292 aa6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 COX19Q49B96 90 aa6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 MBNL2Q5VZF2 373 aaKnown RBP6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 LINC00596Q86U02 117 aa6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 NFE4Q86UQ8 179 aa6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 TMEM191AQ9H0A3 160 aa6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 SS18L2Q9UHA2 77 aa6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 LRBAP50851 2863 aa6.99□□□□□ -1.29
SMARCA1-203ENST00000371123 COL27A1Q8IZC6 1860 aaPredicted RBP6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 PIGBOS1A0A0B4J2F0 54 aa6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 IGKV3-20P01619 116 aa6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 SAMD5Q5TGI4 173 aa6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 WI2-2373I1.2A0A1W2PRP0 233 aa6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 M0R3E3 92 aa6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 MT-ATP8P03928 68 aa6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 FTH1P19P0C7X4 201 aa6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 ETDBQ3ZM63 59 aa6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 CIARTQ8N365 385 aaPredicted RBP6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 GCSAMQ8N6F7 178 aa6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 RNF183Q96D59 192 aa6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 ZNF48Q96MX3 618 aaPredicted RBP6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 A0A1B0GV72 72 aa6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 SUB1P53999 127 aaKnown RBP eCLIP6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 C5orf64Q2M2E5 130 aa6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 RPUSD1Q9UJJ7 312 aaKnown RBP6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 PSG8Q9UQ74 426 aa6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 DCHS2Q6V1P9 2916 aa6.98□□□□□ -1.29
SMARCA1-203ENST00000371123 IGKV1D-17A0A075B6S4 117 aa6.97□□□□□ -1.29
SMARCA1-203ENST00000371123 IGKV3D-15A0A087WSY6 115 aa6.97□□□□□ -1.29
SMARCA1-203ENST00000371123 PRR33A8MZF0 331 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms