RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 DOCK10Q96BY6 2186 aa13.9□□□□□ -0.18
PTP4A1-201ENST00000370651 RSPO1Q2MKA7 263 aaPredicted RBP13.9□□□□□ -0.18
PTP4A1-201ENST00000370651 SPTAN1Q13813 2472 aaKnown RBP13.9□□□□□ -0.18
PTP4A1-201ENST00000370651 GGTLC3B5MD39 225 aa13.9□□□□□ -0.18
PTP4A1-201ENST00000370651 IGLL1P15814 213 aa13.9□□□□□ -0.18
PTP4A1-201ENST00000370651 ZNF672Q499Z4 452 aaPredicted RBP13.9□□□□□ -0.18
PTP4A1-201ENST00000370651 ZNF407Q9C0G0 2248 aa13.9□□□□□ -0.18
PTP4A1-201ENST00000370651 THBDP07204 575 aa13.9□□□□□ -0.18
PTP4A1-201ENST00000370651 C5orf64Q2M2E5 130 aa13.9□□□□□ -0.18
PTP4A1-201ENST00000370651 A0A1W2PPI3 338 aa13.9□□□□□ -0.18
PTP4A1-201ENST00000370651 SRSF6Q13247 344 aaKnown RBP13.9□□□□□ -0.18
PTP4A1-201ENST00000370651 TRGV11A0A075B6L2 103 aa13.89□□□□□ -0.19
PTP4A1-201ENST00000370651 A0A0U1RRA0 63 aa13.89□□□□□ -0.19
PTP4A1-201ENST00000370651 MMP23AO75900 390 aa13.89□□□□□ -0.19
PTP4A1-201ENST00000370651 CDPF1Q6NVV7 123 aa13.89□□□□□ -0.19
PTP4A1-201ENST00000370651 SHANK2-AS3Q9BTD1 123 aa13.89□□□□□ -0.19
PTP4A1-201ENST00000370651 LINC00527Q9UJ94 153 aa13.89□□□□□ -0.19
PTP4A1-201ENST00000370651 FAM231DQ6ZW35 169 aa13.89□□□□□ -0.19
PTP4A1-201ENST00000370651 SHANK1Q9Y566 2161 aa13.89□□□□□ -0.19
PTP4A1-201ENST00000370651 IGFL4Q6B9Z1 124 aa13.89□□□□□ -0.19
PTP4A1-201ENST00000370651 TEX43Q6ZNM6 134 aa13.89□□□□□ -0.19
PTP4A1-201ENST00000370651 C9orf139Q6ZV77 190 aa13.89□□□□□ -0.19
PTP4A1-201ENST00000370651 PLEKHB2Q96CS7 222 aa13.89□□□□□ -0.19
PTP4A1-201ENST00000370651 NBASA2RRP1 2371 aa13.88□□□□□ -0.19
PTP4A1-201ENST00000370651 TRGV2A0A075B6R0 118 aa13.88□□□□□ -0.19
PTP4A1-201ENST00000370651 WFDC12Q8WWY7 111 aa13.88□□□□□ -0.19
PTP4A1-201ENST00000370651 TRAV41A0A0B4J266 112 aa13.88□□□□□ -0.19
PTP4A1-201ENST00000370651 BUB1B-PAK6H3BSN5 160 aa13.88□□□□□ -0.19
PTP4A1-201ENST00000370651 MGAMO43451 1857 aa13.88□□□□□ -0.19
PTP4A1-201ENST00000370651 NUP37Q8NFH4 326 aa13.88□□□□□ -0.19
PTP4A1-201ENST00000370651 THADAQ6YHU6 1953 aa13.88□□□□□ -0.19
PTP4A1-201ENST00000370651 GPR179Q6PRD1 2367 aa13.88□□□□□ -0.19
PTP4A1-201ENST00000370651 PDE6HQ13956 83 aa13.88□□□□□ -0.19
PTP4A1-201ENST00000370651 PLXNA4Q9HCM2 1894 aa13.88□□□□□ -0.19
PTP4A1-201ENST00000370651 SRD5A1P18405 259 aa13.87□□□□□ -0.19
PTP4A1-201ENST00000370651 CFHR2P36980 270 aa13.87□□□□□ -0.19
PTP4A1-201ENST00000370651 TNFRSF6BO95407 300 aa13.87□□□□□ -0.19
PTP4A1-201ENST00000370651 TMEM155Q4W5P6 130 aa13.87□□□□□ -0.19
PTP4A1-201ENST00000370651 C11orf52Q96A22 123 aa13.87□□□□□ -0.19
PTP4A1-201ENST00000370651 SMIM27A0A1W2PRY6 76 aa13.87□□□□□ -0.19
PTP4A1-201ENST00000370651 OOSP1A8MZH6 123 aa13.87□□□□□ -0.19
PTP4A1-201ENST00000370651 VCYO14598 125 aa13.87□□□□□ -0.19
PTP4A1-201ENST00000370651 CD59P13987 128 aa13.87□□□□□ -0.19
PTP4A1-201ENST00000370651 C14orf178Q8N769 122 aaPredicted RBP13.87□□□□□ -0.19
PTP4A1-201ENST00000370651 TMEM213A2RRL7 107 aa13.87□□□□□ -0.19
PTP4A1-201ENST00000370651 KLRD1Q13241 179 aa13.87□□□□□ -0.19
PTP4A1-201ENST00000370651 IGLV3-1P01715 115 aa13.86□□□□□ -0.19
PTP4A1-201ENST00000370651 SRRM4A7MD48 611 aaKnown RBP13.86□□□□□ -0.19
PTP4A1-201ENST00000370651 TRAV40A0A0B4J280 105 aa13.86□□□□□ -0.19
PTP4A1-201ENST00000370651 ZNF876PQ49A33 203 aa13.86□□□□□ -0.19
PTP4A1-201ENST00000370651 VMO1Q7Z5L0 202 aa13.86□□□□□ -0.19
PTP4A1-201ENST00000370651 CSTL1Q9H114 145 aa13.86□□□□□ -0.19
PTP4A1-201ENST00000370651 FAM104BQ5XKR9 115 aa13.86□□□□□ -0.19
PTP4A1-201ENST00000370651 MORN3Q6PF18 240 aaPredicted RBP13.86□□□□□ -0.19
PTP4A1-201ENST00000370651 DEFB104AQ8WTQ1 72 aa13.86□□□□□ -0.19
PTP4A1-201ENST00000370651 LINC00477Q96M19 166 aa13.86□□□□□ -0.19
PTP4A1-201ENST00000370651 NDUFA4L2Q9NRX3 87 aa13.86□□□□□ -0.19
PTP4A1-201ENST00000370651 ZNRD1Q9P1U0 126 aa13.86□□□□□ -0.19
PTP4A1-201ENST00000370651 PEMTQ9UBM1 199 aa13.86□□□□□ -0.19
PTP4A1-201ENST00000370651 NOTCH3Q9UM47 2321 aa13.85□□□□□ -0.19
PTP4A1-201ENST00000370651 C9orf118A6NHY6 69 aa13.85□□□□□ -0.19
PTP4A1-201ENST00000370651 ZNF562Q6V9R5 426 aa13.85□□□□□ -0.19
PTP4A1-201ENST00000370651 TMEM75Q8N9X5 138 aa13.85□□□□□ -0.19
PTP4A1-201ENST00000370651 NLRC5Q86WI3 1866 aa13.85□□□□□ -0.19
PTP4A1-201ENST00000370651 IGHV1-24A0A0C4DH33 117 aa13.85□□□□□ -0.19
PTP4A1-201ENST00000370651 SPINK8P0C7L1 97 aa13.85□□□□□ -0.19
PTP4A1-201ENST00000370651 TMEM249Q2WGJ8 235 aa13.85□□□□□ -0.19
PTP4A1-201ENST00000370651 ZNF474Q6S9Z5 364 aaPredicted RBP13.85□□□□□ -0.19
PTP4A1-201ENST00000370651 FNDC1Q4ZHG4 1894 aaPredicted RBP13.85□□□□□ -0.19
PTP4A1-201ENST00000370651 MINOS1Q5TGZ0 78 aa13.85□□□□□ -0.19
PTP4A1-201ENST00000370651 SPACA3Q8IXA5 215 aa13.85□□□□□ -0.19
PTP4A1-201ENST00000370651 MINOS1-NBL1R4GNA1 71 aa13.85□□□□□ -0.19
PTP4A1-201ENST00000370651 CFAP161Q6P656 301 aa13.84□□□□□ -0.19
PTP4A1-201ENST00000370651 PLXND1Q9Y4D7 1925 aa13.84□□□□□ -0.19
PTP4A1-201ENST00000370651 MBD3L4A6NDZ8 208 aaPredicted RBP13.84□□□□□ -0.19
PTP4A1-201ENST00000370651 MBD3L3A6NE82 208 aaPredicted RBP13.84□□□□□ -0.19
PTP4A1-201ENST00000370651 MBD3L5A6NJ08 208 aaPredicted RBP13.84□□□□□ -0.19
PTP4A1-201ENST00000370651 MBD3L2Q8NHZ7 208 aaPredicted RBP13.84□□□□□ -0.19
PTP4A1-201ENST00000370651 COA6Q5JTJ3 125 aaKnown RBP13.84□□□□□ -0.19
PTP4A1-201ENST00000370651 C2orf82Q6UX34 121 aa13.84□□□□□ -0.19
PTP4A1-201ENST00000370651 WDR86Q86TI4 376 aa13.84□□□□□ -0.19
PTP4A1-201ENST00000370651 IGHG3P01860 377 aa13.84□□□□□ -0.19
PTP4A1-201ENST00000370651 COX8AP10176 69 aa13.84□□□□□ -0.19
PTP4A1-201ENST00000370651 NDPQ00604 133 aa13.84□□□□□ -0.19
PTP4A1-201ENST00000370651 LYPD2Q6UXB3 125 aa13.84□□□□□ -0.19
PTP4A1-201ENST00000370651 SRSF8Q9BRL6 282 aaKnown RBP13.84□□□□□ -0.19
PTP4A1-201ENST00000370651 HELZP42694 1942 aaKnown RBP13.83□□□□□ -0.19
PTP4A1-201ENST00000370651 SSBP2P81877 361 aaPredicted RBP13.83□□□□□ -0.2
PTP4A1-201ENST00000370651 NPC2P61916 151 aa13.83□□□□□ -0.2
PTP4A1-201ENST00000370651 PROK2Q9HC23 129 aa13.83□□□□□ -0.2
PTP4A1-201ENST00000370651 RCHY1Q96PM5 261 aa13.83□□□□□ -0.2
PTP4A1-201ENST00000370651 PRSS46E5RG02 174 aa13.82□□□□□ -0.2
PTP4A1-201ENST00000370651 RNF166Q96A37 237 aaPredicted RBP13.82□□□□□ -0.2
PTP4A1-201ENST00000370651 K7EP13 123 aa13.82□□□□□ -0.2
PTP4A1-201ENST00000370651 TRBV7-1A0A0A6YYK4 115 aa13.81□□□□□ -0.2
PTP4A1-201ENST00000370651 YLPM1P49750 1951 aaKnown RBP13.81□□□□□ -0.2
PTP4A1-201ENST00000370651 ERCC8Q13216 396 aa13.81□□□□□ -0.2
PTP4A1-201ENST00000370651 TMEM219Q86XT9 240 aa13.81□□□□□ -0.2
PTP4A1-201ENST00000370651 STHQ8IWL8 128 aa13.81□□□□□ -0.2
PTP4A1-201ENST00000370651 TRBV19A0A075B6N1 114 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms