RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 LINC01549A6NIU2 74 aa9.97□□□□□ -0.81
RAP1A-202ENST00000369709 BRWD1-AS2P59051 145 aa9.97□□□□□ -0.81
RAP1A-202ENST00000369709 RAX2Q96IS3 184 aa9.97□□□□□ -0.81
RAP1A-202ENST00000369709 UBTD1Q9HAC8 227 aa9.97□□□□□ -0.81
RAP1A-202ENST00000369709 C15orf65H3BRN8 121 aa9.96□□□□□ -0.81
RAP1A-202ENST00000369709 KRTAP27-1Q3LI81 207 aa9.96□□□□□ -0.81
RAP1A-202ENST00000369709 Q8TCH9 128 aa9.96□□□□□ -0.81
RAP1A-202ENST00000369709 KIAA1549Q9HCM3 1950 aa9.96□□□□□ -0.81
RAP1A-202ENST00000369709 SMPXQ9UHP9 88 aa9.96□□□□□ -0.81
RAP1A-202ENST00000369709 IGKV1OR2-108A0A075B7D4 117 aa9.96□□□□□ -0.81
RAP1A-202ENST00000369709 LAGE3Q14657 143 aa9.96□□□□□ -0.81
RAP1A-202ENST00000369709 DEFB109BQ30KR1 87 aa9.96□□□□□ -0.81
RAP1A-202ENST00000369709 SMIM20Q8N5G0 67 aa9.96□□□□□ -0.81
RAP1A-202ENST00000369709 TNRC6AQ8NDV7 1962 aaKnown RBP9.96□□□□□ -0.81
RAP1A-202ENST00000369709 PMS2CLQ68D20 193 aa9.96□□□□□ -0.82
RAP1A-202ENST00000369709 SPAG8Q99932 426 aaPredicted RBP9.96□□□□□ -0.82
RAP1A-202ENST00000369709 SRRM4A7MD48 611 aaKnown RBP9.96□□□□□ -0.82
RAP1A-202ENST00000369709 DUX4L9Q6RFH8 374 aaPredicted RBP9.96□□□□□ -0.82
RAP1A-202ENST00000369709 FOXI2Q6ZQN5 318 aa9.96□□□□□ -0.82
RAP1A-202ENST00000369709 MAFAQ8NHW3 353 aaPredicted RBP9.95□□□□□ -0.82
RAP1A-202ENST00000369709 SRSF1Q07955 248 aaKnown RBP eCLIP9.95□□□□□ -0.82
RAP1A-202ENST00000369709 TMEM95Q3KNT9 176 aa9.95□□□□□ -0.82
RAP1A-202ENST00000369709 BOD1L2Q8IYS8 172 aa9.95□□□□□ -0.82
RAP1A-202ENST00000369709 RNF125Q96EQ8 232 aa9.95□□□□□ -0.82
RAP1A-202ENST00000369709 PHLDA3Q9Y5J5 127 aa9.95□□□□□ -0.82
RAP1A-202ENST00000369709 TRBV25-1A0A075B6N4 114 aa9.95□□□□□ -0.82
RAP1A-202ENST00000369709 PRR33A8MZF0 331 aa9.95□□□□□ -0.82
RAP1A-202ENST00000369709 SRRM5B3KS81 715 aa9.95□□□□□ -0.82
RAP1A-202ENST00000369709 LOXL1Q08397 574 aaPredicted RBP9.95□□□□□ -0.82
RAP1A-202ENST00000369709 ECSCRQ19T08 205 aa9.95□□□□□ -0.82
RAP1A-202ENST00000369709 RNFT1Q5M7Z0 435 aa9.95□□□□□ -0.82
RAP1A-202ENST00000369709 ZCCHC24Q8N2G6 241 aaKnown RBP9.95□□□□□ -0.82
RAP1A-202ENST00000369709 MRPL35Q9NZE8 188 aaKnown RBP9.95□□□□□ -0.82
RAP1A-202ENST00000369709 IGHV3-64A0A075B6Q5 118 aa9.95□□□□□ -0.82
RAP1A-202ENST00000369709 TNFRSF6BO95407 300 aa9.95□□□□□ -0.82
RAP1A-202ENST00000369709 C3orf36Q3SXR2 165 aa9.95□□□□□ -0.82
RAP1A-202ENST00000369709 COX6CP09669 75 aa9.94□□□□□ -0.82
RAP1A-202ENST00000369709 MFAP4P55083 255 aa9.94□□□□□ -0.82
RAP1A-202ENST00000369709 C8orf86Q6ZUL3 223 aa9.94□□□□□ -0.82
RAP1A-202ENST00000369709 CITED1Q99966 193 aa9.94□□□□□ -0.82
RAP1A-202ENST00000369709 C20orf78Q9BR46 151 aa9.94□□□□□ -0.82
RAP1A-202ENST00000369709 TRAV2A0A0B4J234 112 aa9.94□□□□□ -0.82
RAP1A-202ENST00000369709 C9JAW5 83 aa9.94□□□□□ -0.82
RAP1A-202ENST00000369709 P0C879 139 aa9.94□□□□□ -0.82
RAP1A-202ENST00000369709 FAM90A1Q86YD7 464 aa9.94□□□□□ -0.82
RAP1A-202ENST00000369709 PI4KAP42356 2102 aa9.94□□□□□ -0.82
RAP1A-202ENST00000369709 GAGE5Q13069 117 aa9.94□□□□□ -0.82
RAP1A-202ENST00000369709 GAGE6Q13070 117 aa9.94□□□□□ -0.82
RAP1A-202ENST00000369709 C2orf91Q6ZV80 131 aa9.94□□□□□ -0.82
RAP1A-202ENST00000369709 PPDPFLQ8WWR9 84 aa9.94□□□□□ -0.82
RAP1A-202ENST00000369709 RNF183Q96D59 192 aa9.93□□□□□ -0.82
RAP1A-202ENST00000369709 TRGV9Q99603 122 aa9.93□□□□□ -0.82
RAP1A-202ENST00000369709 C1QTNF4Q9BXJ3 329 aa9.93□□□□□ -0.82
RAP1A-202ENST00000369709 FABP5P3A8MUU1 101 aa9.93□□□□□ -0.82
RAP1A-202ENST00000369709 LINC00322Q6ZN03 302 aaPredicted RBP9.93□□□□□ -0.82
RAP1A-202ENST00000369709 NEU4Q8WWR8 484 aaPredicted RBP9.93□□□□□ -0.82
RAP1A-202ENST00000369709 FAM167A-AS1Q96KT0 104 aa9.93□□□□□ -0.82
RAP1A-202ENST00000369709 WT1-ASQ06250 92 aa9.93□□□□□ -0.82
RAP1A-202ENST00000369709 TMEM131Q92545 1883 aa9.93□□□□□ -0.82
RAP1A-202ENST00000369709 SPRR3Q9UBC9 169 aa9.93□□□□□ -0.82
RAP1A-202ENST00000369709 YLPM1P49750 1951 aaKnown RBP9.92□□□□□ -0.82
RAP1A-202ENST00000369709 TRAV26-2A0A0B4J265 109 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 PRSS29PA6NIE9 313 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 C9orf172C9J069 976 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 TM4SF5O14894 197 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 DAZAP2Q15038 168 aaPredicted RBP9.92□□□□□ -0.82
RAP1A-202ENST00000369709 NDUFA4L2Q9NRX3 87 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 A0A1W2PPI3 338 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 KLRB1Q12918 225 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 C17orf77Q96MU5 243 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 ARRDC1-AS1Q9H2J1 176 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 LINC00312Q9Y6C7 94 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 HLA-DRB4P13762 266 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 PLNP26678 52 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 RRN3P1Q2M238 152 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 PATE2Q6UY27 113 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 C16orf92Q96LL3 132 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 HLA-DRB4X5D2U9 266 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 IGHV1-18A0A0C4DH31 117 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 KLF12Q9Y4X4 402 aa9.92□□□□□ -0.82
RAP1A-202ENST00000369709 TRAV17A0A0B4J275 112 aa9.91□□□□□ -0.82
RAP1A-202ENST00000369709 FAM74A4Q5TZK3 123 aa9.91□□□□□ -0.82
RAP1A-202ENST00000369709 MBD6Q96DN6 1003 aa9.91□□□□□ -0.82
RAP1A-202ENST00000369709 A0A1B0GXF2 115 aa9.91□□□□□ -0.82
RAP1A-202ENST00000369709 H7C1H1 209 aa9.91□□□□□ -0.82
RAP1A-202ENST00000369709 MT-ATP8P03928 68 aa9.91□□□□□ -0.82
RAP1A-202ENST00000369709 TMEM167AQ8TBQ9 72 aa9.91□□□□□ -0.82
RAP1A-202ENST00000369709 PTH2Q96A98 100 aa9.91□□□□□ -0.82
RAP1A-202ENST00000369709 CEP250Q9BV73 2442 aa9.91□□□□□ -0.82
RAP1A-202ENST00000369709 ZNF688P0C7X2 276 aa9.9□□□□□ -0.82
RAP1A-202ENST00000369709 EFNA4P52798 201 aa9.9□□□□□ -0.82
RAP1A-202ENST00000369709 TPSG1Q9NRR2 321 aa9.9□□□□□ -0.82
RAP1A-202ENST00000369709 SPANXB1Q9NS25 103 aaPredicted RBP9.9□□□□□ -0.82
RAP1A-202ENST00000369709 C17orf58Q2M2W7 97 aa9.9□□□□□ -0.82
RAP1A-202ENST00000369709 RNF138Q8WVD3 245 aa9.9□□□□□ -0.82
RAP1A-202ENST00000369709 RAB1BQ9H0U4 201 aa9.9□□□□□ -0.82
RAP1A-202ENST00000369709 ABCA1O95477 2261 aa9.9□□□□□ -0.82
RAP1A-202ENST00000369709 TRAV12-3A0A0B4J271 114 aa9.9□□□□□ -0.82
RAP1A-202ENST00000369709 MYMXA0A1B0GTQ4 84 aa9.9□□□□□ -0.82
RAP1A-202ENST00000369709 HTN1P15515 57 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms