RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 IGF2BP2-AS1Q96M15 143 aa12.78□□□□□ -0.36
SYNCRIP-202ENST00000369622 NDUFA4L2Q9NRX3 87 aa12.78□□□□□ -0.36
SYNCRIP-202ENST00000369622 TMEM200BQ69YZ2 307 aa12.78□□□□□ -0.36
SYNCRIP-202ENST00000369622 OSR1Q8TAX0 266 aaPredicted RBP12.78□□□□□ -0.36
SYNCRIP-202ENST00000369622 PGPEP1Q9NXJ5 209 aa12.78□□□□□ -0.36
SYNCRIP-202ENST00000369622 GATA4P43694 442 aa12.78□□□□□ -0.36
SYNCRIP-202ENST00000369622 FAM169BQ8N8A8 192 aa12.78□□□□□ -0.36
SYNCRIP-202ENST00000369622 SPATA25Q9BR10 227 aa12.78□□□□□ -0.36
SYNCRIP-202ENST00000369622 LINC00312Q9Y6C7 94 aa12.78□□□□□ -0.36
SYNCRIP-202ENST00000369622 APC2O95996 2303 aa12.78□□□□□ -0.36
SYNCRIP-202ENST00000369622 PGPA6NDG6 321 aa12.77□□□□□ -0.36
SYNCRIP-202ENST00000369622 FNDC10F2Z333 226 aa12.77□□□□□ -0.36
SYNCRIP-202ENST00000369622 PEX7O00628 323 aa12.77□□□□□ -0.36
SYNCRIP-202ENST00000369622 LINC01545Q5VT33 79 aa12.77□□□□□ -0.36
SYNCRIP-202ENST00000369622 LYPD2Q6UXB3 125 aa12.77□□□□□ -0.36
SYNCRIP-202ENST00000369622 PATE2Q6UY27 113 aa12.77□□□□□ -0.36
SYNCRIP-202ENST00000369622 BCL6BQ8N143 479 aaPredicted RBP12.77□□□□□ -0.36
SYNCRIP-202ENST00000369622 RITA1Q96K30 269 aa12.77□□□□□ -0.36
SYNCRIP-202ENST00000369622 MRPL16Q9NX20 251 aaKnown RBP12.77□□□□□ -0.36
SYNCRIP-202ENST00000369622 RAI1Q7Z5J4 1906 aaPredicted RBP12.77□□□□□ -0.37
SYNCRIP-202ENST00000369622 TM4SF5O14894 197 aa12.77□□□□□ -0.37
SYNCRIP-202ENST00000369622 OR2J3O76001 311 aa12.77□□□□□ -0.37
SYNCRIP-202ENST00000369622 APOHP02749 345 aaPredicted RBP12.77□□□□□ -0.37
SYNCRIP-202ENST00000369622 SYT8Q8NBV8 401 aa12.77□□□□□ -0.37
SYNCRIP-202ENST00000369622 OR4C13Q8NGP0 309 aa12.77□□□□□ -0.37
SYNCRIP-202ENST00000369622 CACNG8Q8WXS5 425 aa12.77□□□□□ -0.37
SYNCRIP-202ENST00000369622 ABCA4P78363 2273 aa12.77□□□□□ -0.37
SYNCRIP-202ENST00000369622 ANKRD11Q6UB99 2663 aaPredicted RBP12.76□□□□□ -0.37
SYNCRIP-202ENST00000369622 TNFRSF1AP19438 455 aa12.76□□□□□ -0.37
SYNCRIP-202ENST00000369622 CACNG7P62955 275 aa12.76□□□□□ -0.37
SYNCRIP-202ENST00000369622 HBBP68871 147 aa12.76□□□□□ -0.37
SYNCRIP-202ENST00000369622 GRAMD2BQ96HH9 432 aa12.76□□□□□ -0.37
SYNCRIP-202ENST00000369622 FAM87AP0C7U9 286 aa12.76□□□□□ -0.37
SYNCRIP-202ENST00000369622 RUSC1-AS1Q66K80 236 aa12.76□□□□□ -0.37
SYNCRIP-202ENST00000369622 SFTA2Q6UW10 78 aa12.76□□□□□ -0.37
SYNCRIP-202ENST00000369622 ABHD17AQ96GS6 310 aa12.76□□□□□ -0.37
SYNCRIP-202ENST00000369622 SMAD7O15105 426 aaKnown RBP12.75□□□□□ -0.37
SYNCRIP-202ENST00000369622 SUB1P53999 127 aaKnown RBP eCLIP12.75□□□□□ -0.37
SYNCRIP-202ENST00000369622 LOXL1Q08397 574 aaPredicted RBP12.75□□□□□ -0.37
SYNCRIP-202ENST00000369622 PDPNQ86YL7 162 aa12.75□□□□□ -0.37
SYNCRIP-202ENST00000369622 WIPF2Q8TF74 440 aaPredicted RBP12.75□□□□□ -0.37
SYNCRIP-202ENST00000369622 GLMPQ8WWB7 406 aa12.75□□□□□ -0.37
SYNCRIP-202ENST00000369622 MRPL32Q9BYC8 188 aaKnown RBP12.75□□□□□ -0.37
SYNCRIP-202ENST00000369622 TMEM189A5PLL7 270 aa12.75□□□□□ -0.37
SYNCRIP-202ENST00000369622 ZNF833PQ6ZTB9 187 aa12.75□□□□□ -0.37
SYNCRIP-202ENST00000369622 ZNF329Q86UD4 541 aa12.75□□□□□ -0.37
SYNCRIP-202ENST00000369622 OR1L4Q8NGR5 311 aa12.75□□□□□ -0.37
SYNCRIP-202ENST00000369622 UFC1Q9Y3C8 167 aa12.75□□□□□ -0.37
SYNCRIP-202ENST00000369622 CHCHD1Q96BP2 118 aaKnown RBP12.75□□□□□ -0.37
SYNCRIP-202ENST00000369622 MALRD1Q5VYJ5 2156 aa12.74□□□□□ -0.37
SYNCRIP-202ENST00000369622 A0A1B0GWB2 263 aa12.74□□□□□ -0.37
SYNCRIP-202ENST00000369622 LINC00322Q6ZN03 302 aaPredicted RBP12.74□□□□□ -0.37
SYNCRIP-202ENST00000369622 C8orf86Q6ZUL3 223 aa12.74□□□□□ -0.37
SYNCRIP-202ENST00000369622 AKAP13Q12802 2813 aa12.74□□□□□ -0.37
SYNCRIP-202ENST00000369622 TCRBV4S1A1TA0A5B7 111 aa12.74□□□□□ -0.37
SYNCRIP-202ENST00000369622 NDUFB3O43676 98 aa12.74□□□□□ -0.37
SYNCRIP-202ENST00000369622 LTAP01374 205 aa12.74□□□□□ -0.37
SYNCRIP-202ENST00000369622 ASCL2Q99929 193 aa12.74□□□□□ -0.37
SYNCRIP-202ENST00000369622 ZNF747Q9BV97 191 aa12.74□□□□□ -0.37
SYNCRIP-202ENST00000369622 A0A1B0GW15 77 aa12.73□□□□□ -0.37
SYNCRIP-202ENST00000369622 C17orf100A8MU93 164 aa12.73□□□□□ -0.37
SYNCRIP-202ENST00000369622 TSPAN13O95857 204 aa12.73□□□□□ -0.37
SYNCRIP-202ENST00000369622 BOD1L2Q8IYS8 172 aa12.73□□□□□ -0.37
SYNCRIP-202ENST00000369622 PIP4P2Q8N4L2 257 aa12.73□□□□□ -0.37
SYNCRIP-202ENST00000369622 OR5AN1Q8NGI8 311 aa12.73□□□□□ -0.37
SYNCRIP-202ENST00000369622 TPPP3Q9BW30 176 aa12.73□□□□□ -0.37
SYNCRIP-202ENST00000369622 RALYQ9UKM9 306 aaKnown RBP12.73□□□□□ -0.37
SYNCRIP-202ENST00000369622 ANAPC13Q9BS18 74 aa12.73□□□□□ -0.37
SYNCRIP-202ENST00000369622 TRBV7-9A0A0J9YWB2 115 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 A0A1W2PPI3 338 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 CGB1A6NKQ9 187 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 FAM90A27PA6NNH2 459 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 SIVA1O15304 175 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 BSPH1Q075Z2 132 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 ADIPOQQ15848 244 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 PRSS3P2Q8NHM4 247 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 GTSF1Q8WW33 167 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 FXYD5Q96DB9 178 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 FCN3O75636 299 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 AP5S1Q9NUS5 200 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 MED13LQ71F56 2210 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 IGKV1D-37A0A075B6S9 117 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 A0A1W2PRD5 423 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 A0A1W2PRF3 423 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 A0A1W2PRM7 423 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 BRI3O95415 125 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 CNTFRP26992 372 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 VMA21Q3ZAQ7 101 aa12.72□□□□□ -0.37
SYNCRIP-202ENST00000369622 FCER1GP30273 86 aa12.71□□□□□ -0.37
SYNCRIP-202ENST00000369622 FOXI2Q6ZQN5 318 aa12.71□□□□□ -0.37
SYNCRIP-202ENST00000369622 DYNLRB1Q9NP97 96 aa12.71□□□□□ -0.37
SYNCRIP-202ENST00000369622 EPDR1Q9UM22 224 aa12.71□□□□□ -0.37
SYNCRIP-202ENST00000369622 TRAV8-1A0A0A6YYK1 113 aa12.71□□□□□ -0.38
SYNCRIP-202ENST00000369622 ATP5IP56385 69 aaPredicted RBP12.71□□□□□ -0.38
SYNCRIP-202ENST00000369622 TEX36Q5VZQ5 186 aa12.71□□□□□ -0.38
SYNCRIP-202ENST00000369622 TMEM167AQ8TBQ9 72 aa12.71□□□□□ -0.38
SYNCRIP-202ENST00000369622 ZNF418Q8TF45 676 aaPredicted RBP12.71□□□□□ -0.38
SYNCRIP-202ENST00000369622 DAZAP1Q96EP5 407 aaKnown RBP12.71□□□□□ -0.38
SYNCRIP-202ENST00000369622 A0A1B0GXF2 115 aa12.7□□□□□ -0.38
SYNCRIP-202ENST00000369622 C16orf97H3BN30 126 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms