RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 TRBV7-9A0A0J9YWB2 115 aa6.51□□□□□ -1.37
SSR2-202ENST00000368311 BRI3O95415 125 aa6.51□□□□□ -1.37
SSR2-202ENST00000368311 P0DMU3 169 aa6.51□□□□□ -1.37
SSR2-202ENST00000368311 FAM231AP0DMU4 169 aa6.51□□□□□ -1.37
SSR2-202ENST00000368311 FAM231CP0DMU5 169 aa6.51□□□□□ -1.37
SSR2-202ENST00000368311 SFTA2Q6UW10 78 aa6.51□□□□□ -1.37
SSR2-202ENST00000368311 TRPT1Q86TN4 253 aaKnown RBP6.51□□□□□ -1.37
SSR2-202ENST00000368311 OR5A1Q8NGJ0 315 aa6.51□□□□□ -1.37
SSR2-202ENST00000368311 DNAJC30Q96LL9 226 aa6.51□□□□□ -1.37
SSR2-202ENST00000368311 TMEM191AQ9H0A3 160 aa6.51□□□□□ -1.37
SSR2-202ENST00000368311 LAMTOR2Q9Y2Q5 125 aa6.51□□□□□ -1.37
SSR2-202ENST00000368311 HBBP68871 147 aa6.51□□□□□ -1.37
SSR2-202ENST00000368311 NHLH2Q02577 135 aa6.51□□□□□ -1.37
SSR2-202ENST00000368311 TMEM183BQ1AE95 376 aa6.51□□□□□ -1.37
SSR2-202ENST00000368311 TMEM183AQ8IXX5 376 aa6.51□□□□□ -1.37
SSR2-202ENST00000368311 NINQ8N4C6 2090 aa6.51□□□□□ -1.37
SSR2-202ENST00000368311 A0A1B0GUT8 65 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 SFTA3P0C7M3 94 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 SUMO2P61956 95 aaKnown RBP6.5□□□□□ -1.37
SSR2-202ENST00000368311 PRB3Q04118 309 aaPredicted RBP6.5□□□□□ -1.37
SSR2-202ENST00000368311 RSPO1Q2MKA7 263 aaPredicted RBP6.5□□□□□ -1.37
SSR2-202ENST00000368311 IGF2BP2-AS1Q96M15 143 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 NIT2Q9NQR4 276 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 LY96Q9Y6Y9 160 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 IGLV11-55A0A075B6I3 123 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 IGHV4OR15-8A0A075B7B6 117 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 A0A087WW49 117 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 TMSB15BA0A087X1C1 80 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 TRAV8-1A0A0A6YYK1 113 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 PGPEP1LA6NFU8 196 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 MDC1Q14676 2089 aaKnown RBP6.5□□□□□ -1.37
SSR2-202ENST00000368311 ZNF134P52741 427 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 PMS2P11Q13670 270 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 PRELID3AQ96N28 172 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 TRBV20OR9-2A0A075B6H5 130 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 LOC105371267A0A1B0GV96 52 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 M0R2P5 195 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 M0R381 172 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 TNFRSF6BO95407 300 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 EDA2RQ9HAV5 297 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 U3KQK5 164 aa6.5□□□□□ -1.37
SSR2-202ENST00000368311 NDUFS6O75380 124 aaKnown RBP6.49□□□□□ -1.37
SSR2-202ENST00000368311 DEFB130BP0DP73 79 aa6.49□□□□□ -1.37
SSR2-202ENST00000368311 DEFB130AP0DP74 79 aa6.49□□□□□ -1.37
SSR2-202ENST00000368311 SLURP1P55000 103 aa6.49□□□□□ -1.37
SSR2-202ENST00000368311 MRAP2Q96G30 205 aa6.49□□□□□ -1.37
SSR2-202ENST00000368311 Q0VG73 95 aa6.49□□□□□ -1.37
SSR2-202ENST00000368311 ERASQ7Z444 233 aa6.49□□□□□ -1.37
SSR2-202ENST00000368311 ZNF702PQ9H963 129 aa6.49□□□□□ -1.37
SSR2-202ENST00000368311 CAMPP49913 170 aa6.49□□□□□ -1.37
SSR2-202ENST00000368311 CTAG1AP78358 180 aa6.49□□□□□ -1.37
SSR2-202ENST00000368311 ATP5L2Q7Z4Y8 100 aa6.49□□□□□ -1.37
SSR2-202ENST00000368311 IGKV1-16P04430 117 aa6.49□□□□□ -1.37
SSR2-202ENST00000368311 CRYBB3P26998 211 aa6.49□□□□□ -1.37
SSR2-202ENST00000368311 BCL6BQ8N143 479 aaPredicted RBP6.49□□□□□ -1.37
SSR2-202ENST00000368311 PARP12Q9H0J9 701 aaKnown RBP6.49□□□□□ -1.37
SSR2-202ENST00000368311 XCL2Q9UBD3 114 aa6.49□□□□□ -1.37
SSR2-202ENST00000368311 RIF1Q5UIP0 2472 aaKnown RBP6.49□□□□□ -1.37
SSR2-202ENST00000368311 RBMY1BA6NDE4 496 aaKnown RBP6.48□□□□□ -1.37
SSR2-202ENST00000368311 RBMY1EA6NEQ0 496 aaKnown RBP6.48□□□□□ -1.37
SSR2-202ENST00000368311 RBMY1DP0C7P1 496 aaKnown RBP6.48□□□□□ -1.37
SSR2-202ENST00000368311 RBMY1A1P0DJD3 496 aaKnown RBP6.48□□□□□ -1.37
SSR2-202ENST00000368311 RBMY1CP0DJD4 496 aa6.48□□□□□ -1.37
SSR2-202ENST00000368311 CCL20P78556 96 aa6.48□□□□□ -1.37
SSR2-202ENST00000368311 C10orf55Q5SWW7 151 aa6.48□□□□□ -1.37
SSR2-202ENST00000368311 MS4A6AQ9H2W1 248 aa6.48□□□□□ -1.37
SSR2-202ENST00000368311 NXT2Q9NPJ8 142 aaKnown RBP6.48□□□□□ -1.37
SSR2-202ENST00000368311 F8W735 103 aaPredicted RBP6.48□□□□□ -1.37
SSR2-202ENST00000368311 LGALS3P17931 250 aaKnown RBP6.48□□□□□ -1.37
SSR2-202ENST00000368311 VAMP3Q15836 100 aa6.48□□□□□ -1.37
SSR2-202ENST00000368311 SIGLEC8Q9NYZ4 499 aa6.48□□□□□ -1.37
SSR2-202ENST00000368311 TNRC6BQ9UPQ9 1833 aaKnown RBP6.48□□□□□ -1.37
SSR2-202ENST00000368311 FAM3BP58499 235 aaPredicted RBP6.48□□□□□ -1.37
SSR2-202ENST00000368311 Q1RN00 199 aa6.48□□□□□ -1.37
SSR2-202ENST00000368311 ERCC8Q13216 396 aa6.48□□□□□ -1.37
SSR2-202ENST00000368311 MIR17HGQ75NE6 70 aa6.48□□□□□ -1.37
SSR2-202ENST00000368311 TMEM37Q8WXS4 190 aa6.48□□□□□ -1.37
SSR2-202ENST00000368311 A0A1B0GW64 132 aa6.47□□□□□ -1.37
SSR2-202ENST00000368311 HIST2H2BCQ6DN03 193 aa6.47□□□□□ -1.37
SSR2-202ENST00000368311 PRR13Q9NZ81 148 aa6.47□□□□□ -1.37
SSR2-202ENST00000368311 TRAV12-3A0A0B4J271 114 aa6.47□□□□□ -1.37
SSR2-202ENST00000368311 VCYO14598 125 aa6.47□□□□□ -1.37
SSR2-202ENST00000368311 CGB3P0DN86 165 aa6.47□□□□□ -1.37
SSR2-202ENST00000368311 TRAV3A0A0B4J244 114 aa6.47□□□□□ -1.37
SSR2-202ENST00000368311 ZNF324O75467 553 aaPredicted RBP6.47□□□□□ -1.37
SSR2-202ENST00000368311 NDUFB4O95168 129 aa6.47□□□□□ -1.37
SSR2-202ENST00000368311 CNTFRP26992 372 aa6.47□□□□□ -1.37
SSR2-202ENST00000368311 BLCAPP62952 87 aa6.47□□□□□ -1.37
SSR2-202ENST00000368311 RASL11AQ6T310 242 aa6.47□□□□□ -1.37
SSR2-202ENST00000368311 NDPQ00604 133 aa6.47□□□□□ -1.37
SSR2-202ENST00000368311 KIAA0141Q14154 515 aaPredicted RBP6.47□□□□□ -1.37
SSR2-202ENST00000368311 ANKRD39Q53RE8 183 aa6.47□□□□□ -1.37
SSR2-202ENST00000368311 LINC00518Q8N0U6 118 aa6.47□□□□□ -1.37
SSR2-202ENST00000368311 CNOT1A5YKK6 2376 aaKnown RBP6.47□□□□□ -1.37
SSR2-202ENST00000368311 DOCK9Q9BZ29 2069 aa6.47□□□□□ -1.37
SSR2-202ENST00000368311 NCOR1O75376 2440 aa6.47□□□□□ -1.37
SSR2-202ENST00000368311 OTOGLQ3ZCN5 2332 aa6.47□□□□□ -1.37
SSR2-202ENST00000368311 ZNF561-AS1K7EIQ3 104 aa6.46□□□□□ -1.37
SSR2-202ENST00000368311 SRSF1Q07955 248 aaKnown RBP eCLIP6.46□□□□□ -1.37
SSR2-202ENST00000368311 MEIG1Q5JSS6 88 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms