RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 NDUFB8O95169 186 aa14.2□□□□□ -0.14
UBQLN4-201ENST00000368309 CRIP1P50238 77 aa14.19□□□□□ -0.14
UBQLN4-201ENST00000368309 UCNP55089 124 aa14.19□□□□□ -0.14
UBQLN4-201ENST00000368309 PSG3Q16557 428 aa14.19□□□□□ -0.14
UBQLN4-201ENST00000368309 COL25A1Q9BXS0 654 aaPredicted RBP14.19□□□□□ -0.14
UBQLN4-201ENST00000368309 C21orf62Q9NYP8 219 aa14.19□□□□□ -0.14
UBQLN4-201ENST00000368309 RNF24Q9Y225 148 aa14.19□□□□□ -0.14
UBQLN4-201ENST00000368309 ARMS2P0C7Q2 107 aa14.18□□□□□ -0.14
UBQLN4-201ENST00000368309 C8orf49Q96NF6 230 aa14.18□□□□□ -0.14
UBQLN4-201ENST00000368309 SOX21Q9Y651 276 aaPredicted RBP14.18□□□□□ -0.14
UBQLN4-201ENST00000368309 C2orf70A6NJV1 201 aa14.18□□□□□ -0.14
UBQLN4-201ENST00000368309 K7EQM0 130 aa14.18□□□□□ -0.14
UBQLN4-201ENST00000368309 BTF3P20290 206 aaKnown RBP14.18□□□□□ -0.14
UBQLN4-201ENST00000368309 SPATA12Q7Z6I5 190 aa14.18□□□□□ -0.14
UBQLN4-201ENST00000368309 TMEM75Q8N9X5 138 aa14.18□□□□□ -0.14
UBQLN4-201ENST00000368309 TXN2Q99757 166 aa14.18□□□□□ -0.14
UBQLN4-201ENST00000368309 APOHP02749 345 aaPredicted RBP14.18□□□□□ -0.14
UBQLN4-201ENST00000368309 IGLC3P0DOY3 106 aa14.18□□□□□ -0.14
UBQLN4-201ENST00000368309 LINC00173Q6ZV60 143 aa14.18□□□□□ -0.14
UBQLN4-201ENST00000368309 LOC102724200A0A096LPH7 203 aaPredicted RBP14.17□□□□□ -0.14
UBQLN4-201ENST00000368309 NPIPB5A8MRT5 1133 aa14.17□□□□□ -0.14
UBQLN4-201ENST00000368309 TMEM11P17152 192 aa14.17□□□□□ -0.14
UBQLN4-201ENST00000368309 CCDC144NLQ6NUI1 221 aa14.17□□□□□ -0.14
UBQLN4-201ENST00000368309 ZFP30Q9Y2G7 519 aa14.17□□□□□ -0.14
UBQLN4-201ENST00000368309 TRAV30A0A087WSZ9 112 aa14.17□□□□□ -0.14
UBQLN4-201ENST00000368309 M0QZK8 103 aa14.17□□□□□ -0.14
UBQLN4-201ENST00000368309 CSN3P07498 182 aa14.17□□□□□ -0.14
UBQLN4-201ENST00000368309 IGFL4Q6B9Z1 124 aa14.17□□□□□ -0.14
UBQLN4-201ENST00000368309 Q6ZN92 141 aa14.17□□□□□ -0.14
UBQLN4-201ENST00000368309 FAM231BA6NCW3 169 aa14.17□□□□□ -0.14
UBQLN4-201ENST00000368309 OVOL3O00110 214 aa14.17□□□□□ -0.14
UBQLN4-201ENST00000368309 TTC9CQ8N5M4 171 aa14.17□□□□□ -0.14
UBQLN4-201ENST00000368309 COL12A1Q99715 3063 aa14.16□□□□□ -0.14
UBQLN4-201ENST00000368309 TMSB15BA0A087X1C1 80 aa14.16□□□□□ -0.14
UBQLN4-201ENST00000368309 ZNF25P17030 456 aaPredicted RBP14.16□□□□□ -0.14
UBQLN4-201ENST00000368309 LY6DQ14210 128 aa14.16□□□□□ -0.14
UBQLN4-201ENST00000368309 FAM120AOSQ5T036 256 aa14.16□□□□□ -0.14
UBQLN4-201ENST00000368309 TIMM8BQ9Y5J9 83 aaPredicted RBP14.16□□□□□ -0.14
UBQLN4-201ENST00000368309 HAX1O00165 279 aa14.16□□□□□ -0.14
UBQLN4-201ENST00000368309 LYPD1Q8N2G4 141 aa14.16□□□□□ -0.14
UBQLN4-201ENST00000368309 AAMDCQ9H7C9 122 aa14.16□□□□□ -0.14
UBQLN4-201ENST00000368309 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.16□□□□□ -0.14
UBQLN4-201ENST00000368309 A0A1B0GUT8 65 aa14.16□□□□□ -0.14
UBQLN4-201ENST00000368309 RPLP1P05386 114 aaKnown RBP14.16□□□□□ -0.14
UBQLN4-201ENST00000368309 TFPI2P48307 235 aa14.16□□□□□ -0.14
UBQLN4-201ENST00000368309 UQCR10Q9UDW1 63 aa14.16□□□□□ -0.14
UBQLN4-201ENST00000368309 LINC00614P0C842 121 aa14.15□□□□□ -0.14
UBQLN4-201ENST00000368309 C16orf54Q6UWD8 224 aa14.15□□□□□ -0.14
UBQLN4-201ENST00000368309 C1RLQ9NZP8 487 aa14.15□□□□□ -0.14
UBQLN4-201ENST00000368309 IGHV1-24A0A0C4DH33 117 aa14.15□□□□□ -0.14
UBQLN4-201ENST00000368309 EGR2P11161 476 aaPredicted RBP14.15□□□□□ -0.14
UBQLN4-201ENST00000368309 UBTD1Q9HAC8 227 aa14.15□□□□□ -0.14
UBQLN4-201ENST00000368309 IGHV7-81A0A0B4J1V7 117 aa14.14□□□□□ -0.15
UBQLN4-201ENST00000368309 Q8N6K4 173 aa14.14□□□□□ -0.15
UBQLN4-201ENST00000368309 IGKV2-40A0A087WW87 121 aaPredicted RBP14.14□□□□□ -0.15
UBQLN4-201ENST00000368309 IGKV2D-40P01614 121 aaPredicted RBP14.14□□□□□ -0.15
UBQLN4-201ENST00000368309 CTSGP08311 255 aa14.14□□□□□ -0.15
UBQLN4-201ENST00000368309 NDFIP1Q9BT67 221 aa14.14□□□□□ -0.15
UBQLN4-201ENST00000368309 THYN1Q9P016 225 aa14.14□□□□□ -0.15
UBQLN4-201ENST00000368309 MAP1AP78559 2803 aaPredicted RBP14.14□□□□□ -0.15
UBQLN4-201ENST00000368309 MUC21A0A0G2JKD1 596 aa14.14□□□□□ -0.15
UBQLN4-201ENST00000368309 TRBV6-1A0A0K0K1D8 114 aa14.14□□□□□ -0.15
UBQLN4-201ENST00000368309 MUC21A0A140T8X8 626 aa14.14□□□□□ -0.15
UBQLN4-201ENST00000368309 MUC21Q5SSG8 566 aa14.14□□□□□ -0.15
UBQLN4-201ENST00000368309 C1orf122Q6ZSJ8 110 aa14.14□□□□□ -0.15
UBQLN4-201ENST00000368309 DTX2Q86UW9 622 aa14.14□□□□□ -0.15
UBQLN4-201ENST00000368309 TMUB1Q9BVT8 246 aa14.14□□□□□ -0.15
UBQLN4-201ENST00000368309 ZFHX3Q15911 3703 aa14.14□□□□□ -0.15
UBQLN4-201ENST00000368309 TMEM70Q9BUB7 260 aa14.13□□□□□ -0.15
UBQLN4-201ENST00000368309 MCRIP2Q9BUT9 160 aaKnown RBP14.13□□□□□ -0.15
UBQLN4-201ENST00000368309 HNRNPA3P51991 378 aaKnown RBP14.13□□□□□ -0.15
UBQLN4-201ENST00000368309 LEPROTL1O95214 131 aa14.12□□□□□ -0.15
UBQLN4-201ENST00000368309 CT45A10P0DMU9 189 aa14.12□□□□□ -0.15
UBQLN4-201ENST00000368309 IGLL1P15814 213 aa14.12□□□□□ -0.15
UBQLN4-201ENST00000368309 KLHDC1Q8N7A1 406 aa14.12□□□□□ -0.15
UBQLN4-201ENST00000368309 CELSR1Q9NYQ6 3014 aa14.12□□□□□ -0.15
UBQLN4-201ENST00000368309 HLA-DMBP28068 263 aa14.12□□□□□ -0.15
UBQLN4-201ENST00000368309 CSN1S1P47710 185 aa14.12□□□□□ -0.15
UBQLN4-201ENST00000368309 ECSCRQ19T08 205 aa14.12□□□□□ -0.15
UBQLN4-201ENST00000368309 Q8N9W7 124 aa14.12□□□□□ -0.15
UBQLN4-201ENST00000368309 TRAV9-2A0A087WT02 112 aa14.12□□□□□ -0.15
UBQLN4-201ENST00000368309 SIRPDQ9H106 197 aa14.12□□□□□ -0.15
UBQLN4-201ENST00000368309 LPAR2Q9HBW0 351 aa14.12□□□□□ -0.15
UBQLN4-201ENST00000368309 H0Y8G0 127 aa14.11□□□□□ -0.15
UBQLN4-201ENST00000368309 RIGQ13278 110 aa14.11□□□□□ -0.15
UBQLN4-201ENST00000368309 EBI3Q14213 229 aa14.11□□□□□ -0.15
UBQLN4-201ENST00000368309 MINOS1Q5TGZ0 78 aa14.11□□□□□ -0.15
UBQLN4-201ENST00000368309 CHCHD1Q96BP2 118 aaKnown RBP14.11□□□□□ -0.15
UBQLN4-201ENST00000368309 MINOS1-NBL1R4GNA1 71 aa14.11□□□□□ -0.15
UBQLN4-201ENST00000368309 FAM162BQ5T6X4 162 aa14.11□□□□□ -0.15
UBQLN4-201ENST00000368309 S100A7AQ86SG5 101 aa14.11□□□□□ -0.15
UBQLN4-201ENST00000368309 Q8TAT8 98 aa14.11□□□□□ -0.15
UBQLN4-201ENST00000368309 PDE6HQ13956 83 aa14.11□□□□□ -0.15
UBQLN4-201ENST00000368309 VPS13CQ709C8 3753 aa14.1□□□□□ -0.15
UBQLN4-201ENST00000368309 FAM106CPP0CH98 169 aa14.1□□□□□ -0.15
UBQLN4-201ENST00000368309 MRPL52Q86TS9 123 aaKnown RBP14.1□□□□□ -0.15
UBQLN4-201ENST00000368309 ZNF48Q96MX3 618 aaPredicted RBP14.1□□□□□ -0.15
UBQLN4-201ENST00000368309 SMAD5-AS1Q9Y6J3 95 aa14.1□□□□□ -0.15
UBQLN4-201ENST00000368309 ITPR1Q14643 2758 aa14.1□□□□□ -0.15
UBQLN4-201ENST00000368309 GPR183P32249 361 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms