RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 BOD1L1Q8NFC6 3051 aa11.23□□□□□ -0.61
CD48-201ENST00000368045 AKAP13Q12802 2813 aa11.22□□□□□ -0.61
CD48-201ENST00000368045 DMXL1Q9Y485 3027 aa11.22□□□□□ -0.61
CD48-201ENST00000368045 M0QZ24 198 aa11.22□□□□□ -0.61
CD48-201ENST00000368045 ARMS2P0C7Q2 107 aa11.22□□□□□ -0.61
CD48-201ENST00000368045 RPL7P18124 248 aaKnown RBP11.22□□□□□ -0.61
CD48-201ENST00000368045 EBI3Q14213 229 aa11.22□□□□□ -0.61
CD48-201ENST00000368045 ZNF493Q6ZR52 646 aa11.22□□□□□ -0.61
CD48-201ENST00000368045 Q8N6K4 173 aa11.22□□□□□ -0.61
CD48-201ENST00000368045 MAP1LC3CQ9BXW4 147 aa11.22□□□□□ -0.61
CD48-201ENST00000368045 C21orf62Q9NYP8 219 aa11.22□□□□□ -0.61
CD48-201ENST00000368045 RIF1Q5UIP0 2472 aaKnown RBP11.22□□□□□ -0.61
CD48-201ENST00000368045 ASPMQ8IZT6 3477 aa11.21□□□□□ -0.61
CD48-201ENST00000368045 CD24P25063 80 aa11.21□□□□□ -0.61
CD48-201ENST00000368045 UCNP55089 124 aa11.21□□□□□ -0.61
CD48-201ENST00000368045 KLRD1Q13241 179 aa11.21□□□□□ -0.61
CD48-201ENST00000368045 ORAOV1Q8WV07 137 aa11.21□□□□□ -0.61
CD48-201ENST00000368045 MGAQ8IWI9 3026 aa11.21□□□□□ -0.61
CD48-201ENST00000368045 NPSP0C0P6 89 aa11.21□□□□□ -0.62
CD48-201ENST00000368045 TFPI2P48307 235 aa11.21□□□□□ -0.62
CD48-201ENST00000368045 CRIP1P50238 77 aa11.21□□□□□ -0.62
CD48-201ENST00000368045 KLF17Q5JT82 389 aaPredicted RBP11.21□□□□□ -0.62
CD48-201ENST00000368045 SAPCD1Q5SSQ6 148 aa11.21□□□□□ -0.62
CD48-201ENST00000368045 APC2O95996 2303 aa11.2□□□□□ -0.62
CD48-201ENST00000368045 ZFHX2Q9C0A1 2572 aaPredicted RBP11.2□□□□□ -0.62
CD48-201ENST00000368045 PCNX1Q96RV3 2341 aa11.2□□□□□ -0.62
CD48-201ENST00000368045 HSBP1L1C9JCN9 74 aa11.2□□□□□ -0.62
CD48-201ENST00000368045 F8W735 103 aaPredicted RBP11.2□□□□□ -0.62
CD48-201ENST00000368045 RPS20P60866 119 aaKnown RBP11.2□□□□□ -0.62
CD48-201ENST00000368045 Q71RC1 249 aaPredicted RBP11.2□□□□□ -0.62
CD48-201ENST00000368045 VMO1Q7Z5L0 202 aa11.2□□□□□ -0.62
CD48-201ENST00000368045 TMUB1Q9BVT8 246 aa11.2□□□□□ -0.62
CD48-201ENST00000368045 MS4A6AQ9H2W1 248 aa11.2□□□□□ -0.62
CD48-201ENST00000368045 AP5S1Q9NUS5 200 aa11.2□□□□□ -0.62
CD48-201ENST00000368045 GVINP1Q7Z2Y8 2422 aa11.2□□□□□ -0.62
CD48-201ENST00000368045 TMEM189A5PLL7 270 aa11.19□□□□□ -0.62
CD48-201ENST00000368045 M0R3E3 92 aa11.19□□□□□ -0.62
CD48-201ENST00000368045 NDUFB8O95169 186 aa11.19□□□□□ -0.62
CD48-201ENST00000368045 ADORA2A-AS1P86434 159 aa11.19□□□□□ -0.62
CD48-201ENST00000368045 KLRB1Q12918 225 aa11.19□□□□□ -0.62
CD48-201ENST00000368045 PRR31Q5SQ13 230 aa11.19□□□□□ -0.62
CD48-201ENST00000368045 LINC00173Q6ZV60 143 aa11.19□□□□□ -0.62
CD48-201ENST00000368045 FA2HQ7L5A8 372 aa11.18□□□□□ -0.62
CD48-201ENST00000368045 DTX2Q86UW9 622 aa11.18□□□□□ -0.62
CD48-201ENST00000368045 MSRB2Q9Y3D2 182 aa11.18□□□□□ -0.62
CD48-201ENST00000368045 U3KQK5 164 aa11.18□□□□□ -0.62
CD48-201ENST00000368045 NCBP2LA6PVI3 153 aaKnown RBP11.18□□□□□ -0.62
CD48-201ENST00000368045 LY6HO94772 140 aa11.18□□□□□ -0.62
CD48-201ENST00000368045 HINT1P49773 126 aaPredicted RBP11.18□□□□□ -0.62
CD48-201ENST00000368045 NDPQ00604 133 aa11.18□□□□□ -0.62
CD48-201ENST00000368045 SRSF2Q01130 221 aaKnown RBP11.18□□□□□ -0.62
CD48-201ENST00000368045 KLK9Q2XQG4 91 aa11.18□□□□□ -0.62
CD48-201ENST00000368045 LINC01545Q5VT33 79 aa11.18□□□□□ -0.62
CD48-201ENST00000368045 OR10AG1Q8NH19 301 aa11.18□□□□□ -0.62
CD48-201ENST00000368045 RABAC1Q9UI14 185 aa11.18□□□□□ -0.62
CD48-201ENST00000368045 KLK9Q9UKQ9 250 aa11.18□□□□□ -0.62
CD48-201ENST00000368045 SH2D1AO60880 128 aa11.17□□□□□ -0.62
CD48-201ENST00000368045 TMEM11P17152 192 aa11.17□□□□□ -0.62
CD48-201ENST00000368045 BMI1P35226 326 aa11.17□□□□□ -0.62
CD48-201ENST00000368045 SLC25A34Q6PIV7 304 aa11.17□□□□□ -0.62
CD48-201ENST00000368045 PRSS3P2Q8NHM4 247 aa11.17□□□□□ -0.62
CD48-201ENST00000368045 C8orf49Q96NF6 230 aa11.17□□□□□ -0.62
CD48-201ENST00000368045 POLEQ07864 2286 aa11.16□□□□□ -0.62
CD48-201ENST00000368045 FBLN7Q53RD9 439 aa11.16□□□□□ -0.62
CD48-201ENST00000368045 LYZL1Q6UWQ5 148 aa11.16□□□□□ -0.62
CD48-201ENST00000368045 PPP1R14DQ9NXH3 145 aa11.16□□□□□ -0.62
CD48-201ENST00000368045 S4R3C0 116 aa11.16□□□□□ -0.62
CD48-201ENST00000368045 CSN3P07498 182 aa11.16□□□□□ -0.62
CD48-201ENST00000368045 CTSGP08311 255 aa11.16□□□□□ -0.62
CD48-201ENST00000368045 RAB9AP51151 201 aa11.16□□□□□ -0.62
CD48-201ENST00000368045 ZNF138P52744 262 aa11.16□□□□□ -0.62
CD48-201ENST00000368045 FAM104BQ5XKR9 115 aa11.16□□□□□ -0.62
CD48-201ENST00000368045 BCL6BQ8N143 479 aaPredicted RBP11.16□□□□□ -0.62
CD48-201ENST00000368045 PRR25Q96S07 402 aa11.16□□□□□ -0.62
CD48-201ENST00000368045 ZNF747Q9BV97 191 aa11.16□□□□□ -0.62
CD48-201ENST00000368045 COX11Q9Y6N1 276 aa11.16□□□□□ -0.62
CD48-201ENST00000368045 ANKHD1Q8IWZ3 2542 aaKnown RBP11.15□□□□□ -0.62
CD48-201ENST00000368045 IGHV7-81A0A0B4J1V7 117 aa11.15□□□□□ -0.62
CD48-201ENST00000368045 A0A1W2PRD5 423 aa11.15□□□□□ -0.62
CD48-201ENST00000368045 A0A1W2PRF3 423 aa11.15□□□□□ -0.62
CD48-201ENST00000368045 A0A1W2PRM7 423 aa11.15□□□□□ -0.62
CD48-201ENST00000368045 FAM106CPP0CH98 169 aa11.15□□□□□ -0.62
CD48-201ENST00000368045 EGR2P11161 476 aaPredicted RBP11.15□□□□□ -0.62
CD48-201ENST00000368045 RELQ04864 619 aaPredicted RBP11.15□□□□□ -0.62
CD48-201ENST00000368045 DYNAPQ8N1N2 210 aa11.15□□□□□ -0.62
CD48-201ENST00000368045 ZNF738Q8NE65 137 aa11.15□□□□□ -0.62
CD48-201ENST00000368045 FAM110DQ8TAY7 271 aaPredicted RBP11.15□□□□□ -0.62
CD48-201ENST00000368045 PMCHL2Q9BQD1 86 aa11.15□□□□□ -0.62
CD48-201ENST00000368045 TPPP3Q9BW30 176 aa11.15□□□□□ -0.62
CD48-201ENST00000368045 SCRT2Q9NQ03 307 aa11.15□□□□□ -0.62
CD48-201ENST00000368045 BSNQ9UPA5 3926 aa11.15□□□□□ -0.63
CD48-201ENST00000368045 hDV102S1A0JD36 115 aa11.14□□□□□ -0.63
CD48-201ENST00000368045 OR2T8A6NH00 312 aa11.14□□□□□ -0.63
CD48-201ENST00000368045 CDSNQ15517 529 aa11.14□□□□□ -0.63
CD48-201ENST00000368045 ORMDL3Q8N138 153 aa11.14□□□□□ -0.63
CD48-201ENST00000368045 SIRPDQ9H106 197 aa11.14□□□□□ -0.63
CD48-201ENST00000368045 IGKV2-40A0A087WW87 121 aaPredicted RBP11.13□□□□□ -0.63
CD48-201ENST00000368045 A0A087X0K7 114 aa11.13□□□□□ -0.63
CD48-201ENST00000368045 IGKV2D-40P01614 121 aaPredicted RBP11.13□□□□□ -0.63
CD48-201ENST00000368045 Q8N9W7 124 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms