RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 UBE2CO00762 179 aa13.33□□□□□ -0.28
SCAF8-201ENST00000367178 ZNF833PQ6ZTB9 187 aa13.33□□□□□ -0.28
SCAF8-201ENST00000367178 CFAP161Q6P656 301 aa13.33□□□□□ -0.28
SCAF8-201ENST00000367178 CHCHD1Q96BP2 118 aaKnown RBP13.33□□□□□ -0.28
SCAF8-201ENST00000367178 SHANK2-AS3Q9BTD1 123 aa13.33□□□□□ -0.28
SCAF8-201ENST00000367178 TRAV12-3A0A0B4J271 114 aa13.33□□□□□ -0.28
SCAF8-201ENST00000367178 IGKV3D-20A0A0C4DH25 116 aa13.33□□□□□ -0.28
SCAF8-201ENST00000367178 REG4Q9BYZ8 158 aa13.33□□□□□ -0.28
SCAF8-201ENST00000367178 NDUFA4L2Q9NRX3 87 aa13.33□□□□□ -0.28
SCAF8-201ENST00000367178 NCR2O95944 276 aa13.33□□□□□ -0.28
SCAF8-201ENST00000367178 RCHY1Q96PM5 261 aa13.33□□□□□ -0.28
SCAF8-201ENST00000367178 ATRXP46100 2492 aa13.32□□□□□ -0.28
SCAF8-201ENST00000367178 IGLV3-1P01715 115 aa13.32□□□□□ -0.28
SCAF8-201ENST00000367178 FAM110DQ8TAY7 271 aaPredicted RBP13.32□□□□□ -0.28
SCAF8-201ENST00000367178 IFI27L1Q96BM0 104 aa13.32□□□□□ -0.28
SCAF8-201ENST00000367178 SH2D1AO60880 128 aa13.32□□□□□ -0.28
SCAF8-201ENST00000367178 DPM2O94777 84 aa13.32□□□□□ -0.28
SCAF8-201ENST00000367178 APOMO95445 188 aa13.32□□□□□ -0.28
SCAF8-201ENST00000367178 SYNJ2BPP57105 145 aa13.32□□□□□ -0.28
SCAF8-201ENST00000367178 TECTAO75443 2155 aa13.32□□□□□ -0.28
SCAF8-201ENST00000367178 CD28P10747 220 aa13.32□□□□□ -0.28
SCAF8-201ENST00000367178 LINC00311Q8N616 119 aa13.32□□□□□ -0.28
SCAF8-201ENST00000367178 CHCHD5Q9BSY4 110 aa13.32□□□□□ -0.28
SCAF8-201ENST00000367178 NUP210Q8TEM1 1887 aaPredicted RBP13.31□□□□□ -0.28
SCAF8-201ENST00000367178 K7EM74 188 aa13.31□□□□□ -0.28
SCAF8-201ENST00000367178 SLX1AQ9BQ83 275 aa13.31□□□□□ -0.28
SCAF8-201ENST00000367178 C15orf65H3BRN8 121 aa13.31□□□□□ -0.28
SCAF8-201ENST00000367178 NDUFB8O95169 186 aa13.31□□□□□ -0.28
SCAF8-201ENST00000367178 D6R8Y8 96 aa13.31□□□□□ -0.28
SCAF8-201ENST00000367178 MMP23AO75900 390 aa13.3□□□□□ -0.28
SCAF8-201ENST00000367178 IGKV1-39P01597 117 aa13.3□□□□□ -0.28
SCAF8-201ENST00000367178 IGKV1D-39P04432 117 aa13.3□□□□□ -0.28
SCAF8-201ENST00000367178 HIST1H2BLQ99880 126 aa13.3□□□□□ -0.28
SCAF8-201ENST00000367178 TRAV9-2A0A087WT02 112 aa13.3□□□□□ -0.28
SCAF8-201ENST00000367178 G3V318 75 aa13.3□□□□□ -0.28
SCAF8-201ENST00000367178 PDE6HQ13956 83 aa13.3□□□□□ -0.28
SCAF8-201ENST00000367178 PRR31Q5SQ13 230 aa13.3□□□□□ -0.28
SCAF8-201ENST00000367178 RASL11AQ6T310 242 aa13.3□□□□□ -0.28
SCAF8-201ENST00000367178 IGFL2Q6UWQ7 119 aa13.3□□□□□ -0.28
SCAF8-201ENST00000367178 Q96MF0 132 aa13.3□□□□□ -0.28
SCAF8-201ENST00000367178 SPOCK3Q9BQ16 436 aa13.3□□□□□ -0.28
SCAF8-201ENST00000367178 DKK1O94907 266 aa13.29□□□□□ -0.28
SCAF8-201ENST00000367178 NUP35Q8NFH5 326 aa13.29□□□□□ -0.28
SCAF8-201ENST00000367178 RNF138Q8WVD3 245 aa13.29□□□□□ -0.28
SCAF8-201ENST00000367178 MALP21145 153 aa13.29□□□□□ -0.28
SCAF8-201ENST00000367178 PAX9P55771 341 aa13.29□□□□□ -0.28
SCAF8-201ENST00000367178 FXYD7P58549 80 aa13.29□□□□□ -0.28
SCAF8-201ENST00000367178 ZNF415Q09FC8 603 aa13.29□□□□□ -0.28
SCAF8-201ENST00000367178 LINC00479Q96M42 142 aa13.29□□□□□ -0.28
SCAF8-201ENST00000367178 PLXND1Q9Y4D7 1925 aa13.29□□□□□ -0.28
SCAF8-201ENST00000367178 TRGV1A0A0A0MS02 117 aa13.29□□□□□ -0.28
SCAF8-201ENST00000367178 A0A1B0GV72 72 aa13.29□□□□□ -0.28
SCAF8-201ENST00000367178 RPL35AP18077 110 aaKnown RBP13.29□□□□□ -0.28
SCAF8-201ENST00000367178 YPEL3P61236 119 aaPredicted RBP13.29□□□□□ -0.28
SCAF8-201ENST00000367178 RNF114Q9Y508 228 aa13.29□□□□□ -0.28
SCAF8-201ENST00000367178 LINC01549A6NIU2 74 aa13.28□□□□□ -0.28
SCAF8-201ENST00000367178 TMEM249Q2WGJ8 235 aa13.28□□□□□ -0.28
SCAF8-201ENST00000367178 ZNF876PQ49A33 203 aa13.28□□□□□ -0.28
SCAF8-201ENST00000367178 FAM90A2PQ658T7 463 aa13.28□□□□□ -0.28
SCAF8-201ENST00000367178 RNF166Q96A37 237 aaPredicted RBP13.28□□□□□ -0.28
SCAF8-201ENST00000367178 J3QKU1 62 aa13.28□□□□□ -0.28
SCAF8-201ENST00000367178 ZNF134P52741 427 aa13.28□□□□□ -0.28
SCAF8-201ENST00000367178 KAAG1Q9UBP8 84 aa13.28□□□□□ -0.28
SCAF8-201ENST00000367178 CHTOPQ9Y3Y2 248 aaKnown RBP13.28□□□□□ -0.28
SCAF8-201ENST00000367178 CR1LQ2VPA4 569 aa13.28□□□□□ -0.28
SCAF8-201ENST00000367178 Q86TA4 180 aa13.28□□□□□ -0.28
SCAF8-201ENST00000367178 LAMTOR2Q9Y2Q5 125 aa13.28□□□□□ -0.28
SCAF8-201ENST00000367178 IGHV3-73A0A0B4J1V6 119 aa13.27□□□□□ -0.28
SCAF8-201ENST00000367178 LAGE3Q14657 143 aa13.27□□□□□ -0.28
SCAF8-201ENST00000367178 DPH3P1Q9H4G8 78 aa13.27□□□□□ -0.28
SCAF8-201ENST00000367178 IGF2-ASQ6U949 168 aa13.27□□□□□ -0.29
SCAF8-201ENST00000367178 NDUFS6O75380 124 aaKnown RBP13.27□□□□□ -0.29
SCAF8-201ENST00000367178 SCGB1A1P11684 91 aa13.27□□□□□ -0.29
SCAF8-201ENST00000367178 HIST3H2BBQ8N257 126 aa13.27□□□□□ -0.29
SCAF8-201ENST00000367178 PRADC1Q9BSG0 188 aa13.27□□□□□ -0.29
SCAF8-201ENST00000367178 C1QTNF4Q9BXJ3 329 aa13.27□□□□□ -0.29
SCAF8-201ENST00000367178 DOCK11Q5JSL3 2073 aa13.26□□□□□ -0.29
SCAF8-201ENST00000367178 UBE2E2Q96LR5 201 aa13.26□□□□□ -0.29
SCAF8-201ENST00000367178 MED13Q9UHV7 2174 aa13.26□□□□□ -0.29
SCAF8-201ENST00000367178 RPL36AP83881 106 aaKnown RBP13.26□□□□□ -0.29
SCAF8-201ENST00000367178 RPL36ALQ969Q0 106 aaKnown RBP13.26□□□□□ -0.29
SCAF8-201ENST00000367178 TRBV7-9A0A0J9YWB2 115 aa13.26□□□□□ -0.29
SCAF8-201ENST00000367178 ADARB2-AS1A8MUL3 147 aa13.26□□□□□ -0.29
SCAF8-201ENST00000367178 INSP01308 110 aa13.26□□□□□ -0.29
SCAF8-201ENST00000367178 IGKCP01834 107 aa13.26□□□□□ -0.29
SCAF8-201ENST00000367178 DTX2Q86UW9 622 aa13.26□□□□□ -0.29
SCAF8-201ENST00000367178 AMBPP02760 352 aa13.26□□□□□ -0.29
SCAF8-201ENST00000367178 GRNP28799 593 aaKnown RBP13.26□□□□□ -0.29
SCAF8-201ENST00000367178 DEFB131AP59861 70 aa13.26□□□□□ -0.29
SCAF8-201ENST00000367178 WT1-ASQ06250 92 aa13.26□□□□□ -0.29
SCAF8-201ENST00000367178 RNF182Q8N6D2 247 aa13.25□□□□□ -0.29
SCAF8-201ENST00000367178 C14orf178Q8N769 122 aaPredicted RBP13.25□□□□□ -0.29
SCAF8-201ENST00000367178 A0A087WX48 190 aa13.25□□□□□ -0.29
SCAF8-201ENST00000367178 TTC32Q5I0X7 151 aa13.25□□□□□ -0.29
SCAF8-201ENST00000367178 ERCC8Q13216 396 aa13.25□□□□□ -0.29
SCAF8-201ENST00000367178 TPSG1Q9NRR2 321 aa13.25□□□□□ -0.29
SCAF8-201ENST00000367178 CRPP02741 224 aa13.24□□□□□ -0.29
SCAF8-201ENST00000367178 ANKHD1Q8IWZ3 2542 aaKnown RBP13.24□□□□□ -0.29
SCAF8-201ENST00000367178 OR9G4Q8NGQ1 327 aa13.24□□□□□ -0.29
SCAF8-201ENST00000367178 DENND4CQ5VZ89 1909 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms