RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 H3BRN7 92 aa8.6□□□□□ -1.03
CSNK1E-202ENST00000366216 TGOLN2O43493 480 aa8.6□□□□□ -1.03
CSNK1E-202ENST00000366216 GPR183P32249 361 aa8.6□□□□□ -1.03
CSNK1E-202ENST00000366216 CEBPGP53567 150 aa8.6□□□□□ -1.03
CSNK1E-202ENST00000366216 TPPP2P59282 170 aa8.6□□□□□ -1.03
CSNK1E-202ENST00000366216 UBE2L3P68036 154 aaKnown RBP8.6□□□□□ -1.03
CSNK1E-202ENST00000366216 PNRC1Q12796 327 aaPredicted RBP8.6□□□□□ -1.03
CSNK1E-202ENST00000366216 C10orf99Q6UWK7 81 aa8.6□□□□□ -1.03
CSNK1E-202ENST00000366216 TMEM190Q8WZ59 177 aa8.6□□□□□ -1.03
CSNK1E-202ENST00000366216 C11orf52Q96A22 123 aa8.6□□□□□ -1.03
CSNK1E-202ENST00000366216 FXYD5Q96DB9 178 aa8.6□□□□□ -1.03
CSNK1E-202ENST00000366216 TVP23CQ96ET8 276 aa8.6□□□□□ -1.03
CSNK1E-202ENST00000366216 NIPSNAP3BQ9BS92 247 aa8.6□□□□□ -1.03
CSNK1E-202ENST00000366216 CHRDL1Q9BU40 450 aa8.6□□□□□ -1.03
CSNK1E-202ENST00000366216 MCRIP2Q9BUT9 160 aaKnown RBP8.6□□□□□ -1.03
CSNK1E-202ENST00000366216 A0A0G2JLM5 398 aa8.59□□□□□ -1.03
CSNK1E-202ENST00000366216 ZNF727A8MUV8 499 aa8.59□□□□□ -1.03
CSNK1E-202ENST00000366216 IGHG4P01861 327 aa8.59□□□□□ -1.03
CSNK1E-202ENST00000366216 OR10J4P0C629 311 aa8.59□□□□□ -1.03
CSNK1E-202ENST00000366216 PYYP10082 97 aa8.59□□□□□ -1.03
CSNK1E-202ENST00000366216 GP9P14770 177 aa8.59□□□□□ -1.03
CSNK1E-202ENST00000366216 RELQ04864 619 aaPredicted RBP8.59□□□□□ -1.03
CSNK1E-202ENST00000366216 RHEBQ15382 184 aa8.59□□□□□ -1.03
CSNK1E-202ENST00000366216 USF2Q15853 346 aaPredicted RBP8.59□□□□□ -1.03
CSNK1E-202ENST00000366216 FAM209BQ5JX69 171 aa8.59□□□□□ -1.03
CSNK1E-202ENST00000366216 ZNF343Q6P1L6 599 aa8.59□□□□□ -1.03
CSNK1E-202ENST00000366216 CLEC19AQ6UXS0 136 aa8.59□□□□□ -1.03
CSNK1E-202ENST00000366216 ZNF414Q96IQ9 312 aa8.59□□□□□ -1.03
CSNK1E-202ENST00000366216 TCEAL7Q9BRU2 100 aa8.59□□□□□ -1.03
CSNK1E-202ENST00000366216 PARLQ9H300 379 aa8.59□□□□□ -1.03
CSNK1E-202ENST00000366216 PUS1Q9Y606 427 aaKnown RBP eCLIP8.59□□□□□ -1.03
CSNK1E-202ENST00000366216 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.58□□□□□ -1.04
CSNK1E-202ENST00000366216 M0R036 132 aa8.58□□□□□ -1.04
CSNK1E-202ENST00000366216 BMPR1BO00238 502 aa8.58□□□□□ -1.04
CSNK1E-202ENST00000366216 HIST1H1EP10412 219 aaKnown RBP8.58□□□□□ -1.04
CSNK1E-202ENST00000366216 NPPCP23582 126 aa8.58□□□□□ -1.04
CSNK1E-202ENST00000366216 RAB9AP51151 201 aa8.58□□□□□ -1.04
CSNK1E-202ENST00000366216 KIAA0141Q14154 515 aaPredicted RBP8.58□□□□□ -1.04
CSNK1E-202ENST00000366216 ZFAND6Q6FIF0 208 aa8.58□□□□□ -1.04
CSNK1E-202ENST00000366216 RCHY1Q96PM5 261 aa8.58□□□□□ -1.04
CSNK1E-202ENST00000366216 SMIM7Q9BQ49 75 aa8.58□□□□□ -1.04
CSNK1E-202ENST00000366216 SDF2L1Q9HCN8 221 aa8.58□□□□□ -1.04
CSNK1E-202ENST00000366216 NAT8Q9UHE5 227 aa8.58□□□□□ -1.04
CSNK1E-202ENST00000366216 RABAC1Q9UI14 185 aa8.58□□□□□ -1.04
CSNK1E-202ENST00000366216 C7orf77A4D0Y5 90 aa8.57□□□□□ -1.04
CSNK1E-202ENST00000366216 ZNF98A6NK75 572 aa8.57□□□□□ -1.04
CSNK1E-202ENST00000366216 B4DEV8 164 aa8.57□□□□□ -1.04
CSNK1E-202ENST00000366216 GGTLC3B5MD39 225 aa8.57□□□□□ -1.04
CSNK1E-202ENST00000366216 DNASE2O00115 360 aaPredicted RBP8.57□□□□□ -1.04
CSNK1E-202ENST00000366216 NBEAP1P0C6P0 100 aa8.57□□□□□ -1.04
CSNK1E-202ENST00000366216 PSMB8P28062 276 aa8.57□□□□□ -1.04
CSNK1E-202ENST00000366216 SLC35B1P78383 322 aa8.57□□□□□ -1.04
CSNK1E-202ENST00000366216 BTN1A1Q13410 526 aa8.57□□□□□ -1.04
CSNK1E-202ENST00000366216 TMEM241Q24JQ0 296 aa8.57□□□□□ -1.04
CSNK1E-202ENST00000366216 KHDC1LQ5JSQ8 128 aa8.57□□□□□ -1.04
CSNK1E-202ENST00000366216 TOMM20LQ6UXN7 152 aa8.57□□□□□ -1.04
CSNK1E-202ENST00000366216 ADAMTSL5Q6ZMM2 481 aa8.57□□□□□ -1.04
CSNK1E-202ENST00000366216 BPIFA4PQ86YQ2 179 aa8.57□□□□□ -1.04
CSNK1E-202ENST00000366216 RPUSD4Q96CM3 377 aaKnown RBP8.57□□□□□ -1.04
CSNK1E-202ENST00000366216 KLK15Q9H2R5 256 aa8.57□□□□□ -1.04
CSNK1E-202ENST00000366216 A0A087WWC5 75 aa8.56□□□□□ -1.04
CSNK1E-202ENST00000366216 SCO2A0A1W2PP80 73 aa8.56□□□□□ -1.04
CSNK1E-202ENST00000366216 MRPS12O15235 138 aaKnown RBP8.56□□□□□ -1.04
CSNK1E-202ENST00000366216 NDUFB4O95168 129 aa8.56□□□□□ -1.04
CSNK1E-202ENST00000366216 ELANEP08246 267 aa8.56□□□□□ -1.04
CSNK1E-202ENST00000366216 MYCNOSP40205 109 aa8.56□□□□□ -1.04
CSNK1E-202ENST00000366216 SUMO1P63165 101 aaKnown RBP8.56□□□□□ -1.04
CSNK1E-202ENST00000366216 FOXE3Q13461 319 aa8.56□□□□□ -1.04
CSNK1E-202ENST00000366216 ZNF674Q2M3X9 581 aa8.56□□□□□ -1.04
CSNK1E-202ENST00000366216 LEMD1Q68G75 181 aa8.56□□□□□ -1.04
CSNK1E-202ENST00000366216 OR4X2Q8NGF9 303 aa8.56□□□□□ -1.04
CSNK1E-202ENST00000366216 PRR25Q96S07 402 aa8.56□□□□□ -1.04
CSNK1E-202ENST00000366216 GNB4Q9HAV0 340 aa8.56□□□□□ -1.04
CSNK1E-202ENST00000366216 ALMS1Q8TCU4 4167 aa8.55□□□□□ -1.04
CSNK1E-202ENST00000366216 IGLC2P0DOY2 106 aa8.55□□□□□ -1.04
CSNK1E-202ENST00000366216 ARL3P36405 182 aa8.55□□□□□ -1.04
CSNK1E-202ENST00000366216 TEX38Q6PEX7 206 aa8.55□□□□□ -1.04
CSNK1E-202ENST00000366216 C18orf65Q6ZTR6 163 aa8.55□□□□□ -1.04
CSNK1E-202ENST00000366216 ZNF329Q86UD4 541 aa8.55□□□□□ -1.04
CSNK1E-202ENST00000366216 LYPD1Q8N2G4 141 aa8.55□□□□□ -1.04
CSNK1E-202ENST00000366216 RNF152Q8N8N0 203 aa8.55□□□□□ -1.04
CSNK1E-202ENST00000366216 MYOZ3Q8TDC0 251 aa8.55□□□□□ -1.04
CSNK1E-202ENST00000366216 C20orf24Q9BUV8 137 aa8.55□□□□□ -1.04
CSNK1E-202ENST00000366216 ELOVL1Q9BW60 279 aa8.55□□□□□ -1.04
CSNK1E-202ENST00000366216 TUBA4BQ9H853 241 aa8.55□□□□□ -1.04
CSNK1E-202ENST00000366216 RPS10P5Q9NQ39 176 aa8.55□□□□□ -1.04
CSNK1E-202ENST00000366216 SMCO4Q9NRQ5 59 aa8.55□□□□□ -1.04
CSNK1E-202ENST00000366216 ZNF586Q9NXT0 402 aa8.55□□□□□ -1.04
CSNK1E-202ENST00000366216 C9JCJ5 164 aa8.54□□□□□ -1.04
CSNK1E-202ENST00000366216 PPP5D1E7EU14 171 aa8.54□□□□□ -1.04
CSNK1E-202ENST00000366216 NDUFA4O00483 81 aa8.54□□□□□ -1.04
CSNK1E-202ENST00000366216 RPL7P18124 248 aaKnown RBP8.54□□□□□ -1.04
CSNK1E-202ENST00000366216 CRYBB3P26998 211 aa8.54□□□□□ -1.04
CSNK1E-202ENST00000366216 RPL23P62829 140 aaKnown RBP8.54□□□□□ -1.04
CSNK1E-202ENST00000366216 PDE6HQ13956 83 aa8.54□□□□□ -1.04
CSNK1E-202ENST00000366216 C1orf194Q5T5A4 169 aa8.54□□□□□ -1.04
CSNK1E-202ENST00000366216 C2CD4CQ8TF44 421 aa8.54□□□□□ -1.04
CSNK1E-202ENST00000366216 BLNKQ8WV28 456 aa8.54□□□□□ -1.04
CSNK1E-202ENST00000366216 HIST1H2BAQ96A08 127 aa8.54□□□□□ -1.04
CSNK1E-202ENST00000366216 GPR82Q96P67 336 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms