RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 CSN3P07498 182 aa5.13□□□□□ -1.59
RNU1-55P-201ENST00000365510 IGLC2P0DOY2 106 aa5.13□□□□□ -1.59
RNU1-55P-201ENST00000365510 HIST1H1EP10412 219 aaKnown RBP5.13□□□□□ -1.59
RNU1-55P-201ENST00000365510 CBLN1P23435 193 aa5.13□□□□□ -1.59
RNU1-55P-201ENST00000365510 TAGLN2P37802 199 aaKnown RBP5.13□□□□□ -1.59
RNU1-55P-201ENST00000365510 RPL11P62913 178 aaKnown RBP5.13□□□□□ -1.59
RNU1-55P-201ENST00000365510 PDE6HQ13956 83 aa5.13□□□□□ -1.59
RNU1-55P-201ENST00000365510 GUK1Q16774 197 aa5.13□□□□□ -1.59
RNU1-55P-201ENST00000365510 TCF24Q7RTU0 167 aa5.13□□□□□ -1.59
RNU1-55P-201ENST00000365510 LYPD6BQ8NI32 183 aa5.13□□□□□ -1.59
RNU1-55P-201ENST00000365510 FXYD5Q96DB9 178 aa5.13□□□□□ -1.59
RNU1-55P-201ENST00000365510 ZNF503Q96F45 646 aa5.13□□□□□ -1.59
RNU1-55P-201ENST00000365510 SIGLEC8Q9NYZ4 499 aa5.13□□□□□ -1.59
RNU1-55P-201ENST00000365510 GNG13Q9P2W3 67 aa5.13□□□□□ -1.59
RNU1-55P-201ENST00000365510 MRPS12O15235 138 aaKnown RBP5.12□□□□□ -1.59
RNU1-55P-201ENST00000365510 ZNF253O75346 499 aa5.12□□□□□ -1.59
RNU1-55P-201ENST00000365510 NBEAP1P0C6P0 100 aa5.12□□□□□ -1.59
RNU1-55P-201ENST00000365510 BCL2P10415 239 aa5.12□□□□□ -1.59
RNU1-55P-201ENST00000365510 CD33P20138 364 aa5.12□□□□□ -1.59
RNU1-55P-201ENST00000365510 EDN2P20800 178 aa5.12□□□□□ -1.59
RNU1-55P-201ENST00000365510 PAFAH1B2P68402 229 aa5.12□□□□□ -1.59
RNU1-55P-201ENST00000365510 BLNKQ8WV28 456 aa5.12□□□□□ -1.59
RNU1-55P-201ENST00000365510 SLC50A1Q9BRV3 221 aa5.12□□□□□ -1.59
RNU1-55P-201ENST00000365510 MCRIP2Q9BUT9 160 aaKnown RBP5.12□□□□□ -1.59
RNU1-55P-201ENST00000365510 TMPRSS5Q9H3S3 457 aa5.12□□□□□ -1.59
RNU1-55P-201ENST00000365510 AAMDCQ9H7C9 122 aa5.12□□□□□ -1.59
RNU1-55P-201ENST00000365510 NRN1Q9NPD7 142 aa5.12□□□□□ -1.59
RNU1-55P-201ENST00000365510 MLXQ9UH92 298 aa5.12□□□□□ -1.59
RNU1-55P-201ENST00000365510 TENM2Q9NT68 2774 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 TRBV19A0A075B6N1 114 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 A0A1W2PRE2 83 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 H3BQ15 152 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 DNASE2O00115 360 aaPredicted RBP5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 INSL3P51460 131 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 UBE2G2P60604 165 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 CCL20P78556 96 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 PSG9Q00887 426 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 PMS2P11Q13670 270 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 NDUFA5Q16718 116 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 TOR2AQ5JU69 321 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 CST9LP1Q5W188 147 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 RBPMS2Q6ZRY4 209 aaKnown RBP5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 COMMD7Q86VX2 200 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 LYPD1Q8N2G4 141 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 OR2K2Q8NGT1 345 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 SUN5Q8TC36 379 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 C16orf92Q96LL3 132 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 FAM210AQ96ND0 272 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 TXNDC17Q9BRA2 123 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 TCEAL7Q9BRU2 100 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 GPR61Q9BZJ8 451 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 NKX6-2Q9C056 277 aaPredicted RBP5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 EIF5A2Q9GZV4 153 aaKnown RBP5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 OTORQ9NRC9 128 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 MED9Q9NWA0 146 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 ZNF586Q9NXT0 402 aa5.11□□□□□ -1.59
RNU1-55P-201ENST00000365510 IGKV3-7A0A075B6H7 116 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 TRAV2A0A0B4J234 112 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 TRAV25A0A0B4J276 109 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 LOC102723971A0A1B0GUV8 181 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 RAB19A4D1S5 217 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 LINC00862A6NCI5 91 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 RBFOX3A6NFN3 312 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 FAM74A7A6NL05 159 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 C11orf94C9JXX5 98 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 H3BTX0 84 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 SLC17A3O00476 420 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 TSPAN4O14817 238 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 PAGE4O60829 102 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 SNRPCP09234 159 aaKnown RBP5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 ID1P41134 155 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 SNRPD3P62318 126 aaKnown RBP5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 RANP62826 216 aaKnown RBP5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 MEF2BQ02080 365 aaPredicted RBP5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 PEA15Q15121 130 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 HAGHQ16775 308 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 DEFB114Q30KQ6 69 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 CD300EQ496F6 205 aaPredicted RBP5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 ZNF506Q5JVG8 444 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 C9orf66Q5T8R8 295 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 FAM90A2PQ658T7 463 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 LCN12Q6JVE5 192 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 ADAMTSL5Q6ZMM2 481 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 TMEM61Q8N0U2 210 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 CMTM2Q8TAZ6 248 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 SPAG8Q99932 426 aaPredicted RBP5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 MS4A6AQ9H2W1 248 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 Q9H3A6 140 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 SMDT1Q9H4I9 107 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 ZNF331Q9NQX6 463 aaPredicted RBP5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 CLEC5AQ9NY25 188 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 VAX2Q9UIW0 290 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 YTHDF2Q9Y5A9 579 aaKnown RBP5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 SMAD5-AS1Q9Y6J3 95 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 TENM3Q9P273 2699 aa5.1□□□□□ -1.59
RNU1-55P-201ENST00000365510 EPPK1P58107 5090 aaKnown RBP5.09□□□□□ -1.59
RNU1-55P-201ENST00000365510 OR4C46A6NHA9 309 aa5.09□□□□□ -1.59
RNU1-55P-201ENST00000365510 GGTLC3B5MD39 225 aa5.09□□□□□ -1.59
RNU1-55P-201ENST00000365510 F6UZH7 168 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms