RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 FRMPD1Q5SYB0 1578 aa0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 HAGHLQ6PII5 290 aaPredicted RBP0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 PATE2Q6UY27 113 aa0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 Q6ZTI0 123 aa0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 LRRC18Q8N456 261 aa0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 OR10AC1Q8NH08 325 aa0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 ZNF431Q8TF32 576 aaPredicted RBP0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 NAT14Q8WUY8 206 aa0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 POP5Q969H6 163 aaKnown RBP0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 TMEM203Q969S6 136 aa0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 CHCHD1Q96BP2 118 aaKnown RBP0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 C20orf166-AS1Q96NR2 134 aa0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 OR4C12Q96R67 309 aa0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 SLC50A1Q9BRV3 221 aa0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 SHANK3Q9BYB0 1731 aa0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 OR5AC2Q9NZP5 309 aa0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 CCL26Q9Y258 94 aa0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 TPRKBQ9Y3C4 175 aa0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 RNF11Q9Y3C5 154 aa0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 PLXND1Q9Y4D7 1925 aa0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 SMARCA4P51532 1647 aa0.85□□□□□ -2.27
RNU6-271P-201ENST00000363858 DOCK6Q96HP0 2047 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 ANKRD31Q8N7Z5 1873 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 ARHGEF28Q8N1W1 1705 aaKnown RBP0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 FAM135BQ49AJ0 1406 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 PRG4Q92954 1404 aaPredicted RBP0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 IGKV3D-11A0A0A0MRZ8 115 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 TRAV3A0A0B4J244 114 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 TRGV4A0A0C4DH28 118 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 LY6LH3BQJ8 138 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 UQCRQO14949 82 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 UBL3O95164 117 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 TRACP01848 142 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 APOC1P02654 83 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 CRPP02741 224 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 RBP4P02753 201 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 MT-ND4LP03901 98 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 CTSDP07339 412 aaPredicted RBP0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 CSRP1P21291 193 aaKnown RBP0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 ETV6P41212 452 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 COPZ1P61923 177 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 CDK6Q00534 326 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 CDK5R1Q15078 307 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 TAF9Q16594 264 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 ZNF791Q3KP31 576 aaPredicted RBP0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 RNASE10Q5GAN6 216 aaKnown RBP0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 GLYATL3Q5SZD4 288 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 Q6ZQT0 140 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 ARPINQ7Z6K5 226 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 CTAGE3PQ8IX95 158 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 LINC00304Q8N9R0 145 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 OR2T35Q8NGX2 323 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 C4orf3Q8WVX3 66 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 COPS9Q8WXC6 57 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 DIRC1Q969H9 104 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 CARD19Q96LW7 228 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 LPAR5Q9H1C0 372 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 SLC35B3Q9H1N7 401 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 CXCL16Q9H2A7 254 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 PRO2289Q9P1D8 64 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 ERG28Q9UKR5 140 aa0.84□□□□□ -2.27
RNU6-271P-201ENST00000363858 UHRF1BP1LA0JNW5 1464 aa0.84□□□□□ -2.28
RNU6-271P-201ENST00000363858 GRIN2AQ12879 1464 aa0.84□□□□□ -2.28
RNU6-271P-201ENST00000363858 NUP98P52948 1817 aa0.84□□□□□ -2.28
RNU6-271P-201ENST00000363858 TAF1LQ8IZX4 1826 aa0.84□□□□□ -2.28
RNU6-271P-201ENST00000363858 OBSL1O75147 1896 aa0.84□□□□□ -2.28
RNU6-271P-201ENST00000363858 SBF1O95248 1867 aa0.84□□□□□ -2.28
RNU6-271P-201ENST00000363858 NUP210Q8TEM1 1887 aaPredicted RBP0.84□□□□□ -2.28
RNU6-271P-201ENST00000363858 NYNRINQ9P2P1 1898 aaKnown RBP0.84□□□□□ -2.28
RNU6-271P-201ENST00000363858 LCTP09848 1927 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 GLI3P10071 1580 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 RTEL1-TNFRSF6BF6WH68 1400 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 ZFHX2Q9C0A1 2572 aaPredicted RBP0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 TRAV27A0A087WT01 109 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 TRAV14DV4A0A0A6YYC5 116 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 IBA57-AS1B1ANH7 110 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 H3BRN7 92 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 ERC2-IT1O76042 136 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 HBDP02042 147 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 GPX1P07203 203 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 TSPAN19P0C672 248 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 P0C880 135 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 BRS3P32247 399 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 SSR2P43308 183 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 DSCR4P56555 118 aaPredicted RBP0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 DNAJB13P59910 316 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 PCBD1P61457 104 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 RRAS2P62070 204 aaPredicted RBP0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 RPS25P62851 125 aaKnown RBP0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 SELENOWP63302 87 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 QRFPP83859 136 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 EMX2Q04743 252 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 ZNF846Q147U1 533 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 SS18Q15532 418 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 NEDD8Q15843 81 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 TMEM244Q5VVB8 128 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 Q5XG85 94 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 GLIPR1L1Q6UWM5 242 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 TMEM14EPQ6UXP3 125 aa0.83□□□□□ -2.28
RNU6-271P-201ENST00000363858 CASC2Q6XLA1 102 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms