RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 TMUB1Q9BVT8 246 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 COX6B1P14854 86 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 TCTEX1D4Q5JR98 221 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 ZNF114Q8NC26 417 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 PRSS3P2Q8NHM4 247 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 RNASE7Q9H1E1 156 aaKnown RBP7.42□□□□□ -1.22
CALD1-202ENST00000361901 HCFC1P51610 2035 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 KALRNO60229 2985 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 COX7A2P2O60397 106 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 IGKV1D-33P01593 117 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 IGKV1-33P01594 117 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 SYT8Q8NBV8 401 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 NRGNQ92686 78 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 NHP2Q9NX24 153 aaKnown RBP7.42□□□□□ -1.22
CALD1-202ENST00000361901 SOX21Q9Y651 276 aaPredicted RBP7.42□□□□□ -1.22
CALD1-202ENST00000361901 A0A1W2PPM0 123 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 PRB4P10163 310 aaPredicted RBP7.42□□□□□ -1.22
CALD1-202ENST00000361901 PLA2G5P39877 138 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 SLC25A48Q6ZT89 311 aaKnown RBP7.42□□□□□ -1.22
CALD1-202ENST00000361901 NHLRC2Q8NBF2 726 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 SMPXQ9UHP9 88 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 TP53TG3Q9ULZ0 132 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 PSG8Q9UQ74 426 aa7.42□□□□□ -1.22
CALD1-202ENST00000361901 SH2D7A6NKC9 451 aaPredicted RBP7.41□□□□□ -1.22
CALD1-202ENST00000361901 COL8A1P27658 744 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 ECSCRQ19T08 205 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 GAGE13Q4V321 117 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 TEX36Q5VZQ5 186 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 MAPK1IP1LQ8NDC0 245 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 ARPC1AQ92747 370 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 TPPP3Q9BW30 176 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 C19orf84I3L1E1 186 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 TIMM23O14925 209 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 ARL14EPLP0DKL9 152 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 LY6EQ16553 131 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 OR4F17Q8NGA8 305 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 NPIPB3Q92617 1050 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 DPM3Q9P2X0 92 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 PROP1O75360 226 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 CNTFRP26992 372 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 CSN1S1P47710 185 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 SPATA31B1PQ5VZV4 182 aa7.41□□□□□ -1.22
CALD1-202ENST00000361901 ZNF418Q8TF45 676 aaPredicted RBP7.41□□□□□ -1.22
CALD1-202ENST00000361901 EAF1Q96JC9 268 aaPredicted RBP7.41□□□□□ -1.22
CALD1-202ENST00000361901 DOPEY1Q5JWR5 2465 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 C15orf61A6NNL5 157 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 SRRM4A7MD48 611 aaKnown RBP7.4□□□□□ -1.22
CALD1-202ENST00000361901 SYS1-DBNDD2H3BUS1 97 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 SNCGO76070 127 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 PSG5Q15238 335 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 OSR1Q8TAX0 266 aaPredicted RBP7.4□□□□□ -1.22
CALD1-202ENST00000361901 FAM168AQ92567 244 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 NPCDR1Q9BY65 106 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 PRORYQ9H606 182 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 LSM4Q9Y4Z0 139 aaKnown RBP7.4□□□□□ -1.22
CALD1-202ENST00000361901 LOC107984156A0A0G2JMH3 177 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 H3BTX0 84 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 UPK2O00526 184 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 MOSP00540 346 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 LYZP61626 148 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 CENPWQ5EE01 88 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 EBLN2Q6P2I7 272 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 ZNF562Q6V9R5 426 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 ARL17AQ8IVW1 177 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.4□□□□□ -1.22
CALD1-202ENST00000361901 WNK1Q9H4A3 2382 aa7.4□□□□□ -1.22
CALD1-202ENST00000361901 MTORP42345 2549 aa7.4□□□□□ -1.23
CALD1-202ENST00000361901 OR11H12B2RN74 326 aa7.4□□□□□ -1.23
CALD1-202ENST00000361901 FRMD6-AS1P0C7T7 363 aa7.4□□□□□ -1.23
CALD1-202ENST00000361901 OR11H1Q8NG94 326 aa7.4□□□□□ -1.23
CALD1-202ENST00000361901 OR11H2Q8NH07 326 aa7.4□□□□□ -1.23
CALD1-202ENST00000361901 ITLN2Q8WWU7 325 aaPredicted RBP7.4□□□□□ -1.23
CALD1-202ENST00000361901 MS4A6AQ9H2W1 248 aa7.4□□□□□ -1.23
CALD1-202ENST00000361901 IGHV3OR16-8A0A075B7F1 116 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 GAGE2BQ13066 116 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 EFNB3Q15768 340 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 GAGE2EQ4V326 116 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 GAGE2DQ9UEU5 116 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 ACANP16112 2415 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 H0YJW9 148 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 CXorf1O96002 111 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 IGHV3-23P01764 117 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 TMEM155Q4W5P6 130 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 C1orf229Q6ZS94 237 aaPredicted RBP7.39□□□□□ -1.23
CALD1-202ENST00000361901 C18orf32Q8TCD1 76 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 VCX2Q9H322 139 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 LRBAP50851 2863 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 GAGE12JA6NER3 117 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 GAGE7O76087 117 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 GAGE12FP0CL80 117 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 GAGE12GP0CL81 117 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 GAGE12IP0CL82 117 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 EFNA4P52798 201 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 GAGE4Q13068 117 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 WFDC2Q14508 124 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 NABP2Q9BQ15 211 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 TPSG1Q9NRR2 321 aa7.39□□□□□ -1.23
CALD1-202ENST00000361901 TRBV20-1A0A075B6N2 111 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 TMSB15BA0A087X1C1 80 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 TRAV5A0A0B4J249 113 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms