RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 SMKR1H3BMG3 65 aa16.99■□□□□ 0.31
SMURF1-201ENST00000361125 GATA4P43694 442 aa16.99■□□□□ 0.31
SMURF1-201ENST00000361125 DLEU1O43261 78 aa16.98■□□□□ 0.31
SMURF1-201ENST00000361125 PFN1P07737 140 aaKnown RBP16.98■□□□□ 0.31
SMURF1-201ENST00000361125 SHANK2-AS3Q9BTD1 123 aa16.98■□□□□ 0.31
SMURF1-201ENST00000361125 RSPO1Q2MKA7 263 aaPredicted RBP16.98■□□□□ 0.31
SMURF1-201ENST00000361125 ZNF833PQ6ZTB9 187 aa16.98■□□□□ 0.31
SMURF1-201ENST00000361125 FAM215AQ9Y5M1 114 aa16.98■□□□□ 0.31
SMURF1-201ENST00000361125 FER1L5A0AVI2 2057 aa16.98■□□□□ 0.31
SMURF1-201ENST00000361125 ORAOV1Q8WV07 137 aa16.97■□□□□ 0.31
SMURF1-201ENST00000361125 NDUFB8O95169 186 aa16.97■□□□□ 0.31
SMURF1-201ENST00000361125 DAZ1Q9NQZ3 744 aaKnown RBP16.97■□□□□ 0.31
SMURF1-201ENST00000361125 LSM4Q9Y4Z0 139 aaKnown RBP16.97■□□□□ 0.31
SMURF1-201ENST00000361125 A0A087WWL8 130 aa16.97■□□□□ 0.31
SMURF1-201ENST00000361125 G3V318 75 aa16.97■□□□□ 0.31
SMURF1-201ENST00000361125 ITGB1BP1O14713 200 aa16.97■□□□□ 0.31
SMURF1-201ENST00000361125 TMEM14BQ9NUH8 114 aa16.97■□□□□ 0.31
SMURF1-201ENST00000361125 EP300Q09472 2414 aaPredicted RBP16.97■□□□□ 0.31
SMURF1-201ENST00000361125 IGHV2-5P01817 119 aa16.97■□□□□ 0.31
SMURF1-201ENST00000361125 IGHV1-69DA0A0B4J2H0 117 aa16.96■□□□□ 0.31
SMURF1-201ENST00000361125 IGKV1-39P01597 117 aa16.96■□□□□ 0.31
SMURF1-201ENST00000361125 IGHV1-69P01742 117 aa16.96■□□□□ 0.31
SMURF1-201ENST00000361125 IGKV1D-39P04432 117 aa16.96■□□□□ 0.31
SMURF1-201ENST00000361125 Q86TA4 180 aa16.96■□□□□ 0.31
SMURF1-201ENST00000361125 VGLL1Q99990 258 aa16.96■□□□□ 0.31
SMURF1-201ENST00000361125 MS4A6AQ9H2W1 248 aa16.96■□□□□ 0.31
SMURF1-201ENST00000361125 IGHV2-70DA0A0C4DH43 119 aa16.96■□□□□ 0.31
SMURF1-201ENST00000361125 ZNF562Q6V9R5 426 aa16.96■□□□□ 0.31
SMURF1-201ENST00000361125 DPH3P1Q9H4G8 78 aa16.96■□□□□ 0.31
SMURF1-201ENST00000361125 PGPEP1Q9NXJ5 209 aa16.96■□□□□ 0.31
SMURF1-201ENST00000361125 LYPD1Q8N2G4 141 aa16.96■□□□□ 0.31
SMURF1-201ENST00000361125 DTX2Q86UW9 622 aa16.96■□□□□ 0.31
SMURF1-201ENST00000361125 HEATR5AQ86XA9 2040 aa16.96■□□□□ 0.3
SMURF1-201ENST00000361125 EREGO14944 169 aa16.95■□□□□ 0.3
SMURF1-201ENST00000361125 LOXP28300 417 aaPredicted RBP16.95■□□□□ 0.3
SMURF1-201ENST00000361125 A8MWP6 167 aa16.95■□□□□ 0.3
SMURF1-201ENST00000361125 NDUFA4L2Q9NRX3 87 aa16.95■□□□□ 0.3
SMURF1-201ENST00000361125 A0A1B0GUS0 222 aa16.95■□□□□ 0.3
SMURF1-201ENST00000361125 IL17RELQ6ZVW7 336 aa16.95■□□□□ 0.3
SMURF1-201ENST00000361125 RNF166Q96A37 237 aaPredicted RBP16.95■□□□□ 0.3
SMURF1-201ENST00000361125 SRSF8Q9BRL6 282 aaKnown RBP16.95■□□□□ 0.3
SMURF1-201ENST00000361125 HOXA3O43365 443 aaPredicted RBP16.95■□□□□ 0.3
SMURF1-201ENST00000361125 MRPL27Q9P0M9 148 aaKnown RBP16.95■□□□□ 0.3
SMURF1-201ENST00000361125 PAX2Q02962 417 aa16.95■□□□□ 0.3
SMURF1-201ENST00000361125 FAM110DQ8TAY7 271 aaPredicted RBP16.95■□□□□ 0.3
SMURF1-201ENST00000361125 POLR3KQ9Y2Y1 108 aaPredicted RBP16.95■□□□□ 0.3
SMURF1-201ENST00000361125 CACNA1DQ01668 2161 aa16.94■□□□□ 0.3
SMURF1-201ENST00000361125 hDV102S1A0JD36 115 aa16.94■□□□□ 0.3
SMURF1-201ENST00000361125 INSP01308 110 aa16.94■□□□□ 0.3
SMURF1-201ENST00000361125 CSTL1Q9H114 145 aa16.94■□□□□ 0.3
SMURF1-201ENST00000361125 FNDC10F2Z333 226 aa16.94■□□□□ 0.3
SMURF1-201ENST00000361125 IL15RAQ13261 267 aa16.94■□□□□ 0.3
SMURF1-201ENST00000361125 C8orf49Q96NF6 230 aa16.94■□□□□ 0.3
SMURF1-201ENST00000361125 PIP4P1Q86T03 277 aa16.94■□□□□ 0.3
SMURF1-201ENST00000361125 IGLV3-1P01715 115 aa16.94■□□□□ 0.3
SMURF1-201ENST00000361125 IGHV2-70P01814 119 aa16.94■□□□□ 0.3
SMURF1-201ENST00000361125 LURAP1LQ8IV03 231 aa16.94■□□□□ 0.3
SMURF1-201ENST00000361125 LINC00158P58513 81 aa16.93■□□□□ 0.3
SMURF1-201ENST00000361125 TPSG1Q9NRR2 321 aa16.93■□□□□ 0.3
SMURF1-201ENST00000361125 IGLV1-44P01699 117 aa16.93■□□□□ 0.3
SMURF1-201ENST00000361125 DIAPH2-AS1Q14236 149 aa16.93■□□□□ 0.3
SMURF1-201ENST00000361125 DEFB131AP59861 70 aa16.93■□□□□ 0.3
SMURF1-201ENST00000361125 AMN1Q8IY45 258 aa16.93■□□□□ 0.3
SMURF1-201ENST00000361125 TDGF1P3P51864 188 aa16.93■□□□□ 0.3
SMURF1-201ENST00000361125 CFHR2P36980 270 aa16.92■□□□□ 0.3
SMURF1-201ENST00000361125 OR5A1Q8NGJ0 315 aa16.92■□□□□ 0.3
SMURF1-201ENST00000361125 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.92■□□□□ 0.3
SMURF1-201ENST00000361125 RPL36AP83881 106 aaKnown RBP16.92■□□□□ 0.3
SMURF1-201ENST00000361125 UBE2DNLQ8IWF7 75 aa16.92■□□□□ 0.3
SMURF1-201ENST00000361125 PHLDA1Q8WV24 401 aaPredicted RBP16.92■□□□□ 0.3
SMURF1-201ENST00000361125 TMEM190Q8WZ59 177 aa16.92■□□□□ 0.3
SMURF1-201ENST00000361125 RPL36ALQ969Q0 106 aaKnown RBP16.92■□□□□ 0.3
SMURF1-201ENST00000361125 SLC25A2Q9BXI2 301 aa16.92■□□□□ 0.3
SMURF1-201ENST00000361125 MMP23AO75900 390 aa16.92■□□□□ 0.3
SMURF1-201ENST00000361125 SEC11AP67812 179 aa16.92■□□□□ 0.3
SMURF1-201ENST00000361125 A0A087WX48 190 aa16.91■□□□□ 0.3
SMURF1-201ENST00000361125 HSD52Q0P140 79 aa16.91■□□□□ 0.3
SMURF1-201ENST00000361125 TEX36Q5VZQ5 186 aa16.91■□□□□ 0.3
SMURF1-201ENST00000361125 C10orf126Q8N4M7 172 aa16.91■□□□□ 0.3
SMURF1-201ENST00000361125 PLXNB3Q9ULL4 1909 aa16.91■□□□□ 0.3
SMURF1-201ENST00000361125 MRPL52Q86TS9 123 aaKnown RBP16.91■□□□□ 0.3
SMURF1-201ENST00000361125 K7EM74 188 aa16.91■□□□□ 0.3
SMURF1-201ENST00000361125 TMEM95Q3KNT9 176 aa16.91■□□□□ 0.3
SMURF1-201ENST00000361125 DKK1O94907 266 aa16.91■□□□□ 0.3
SMURF1-201ENST00000361125 ZNF134P52741 427 aa16.91■□□□□ 0.3
SMURF1-201ENST00000361125 Q71RC1 249 aaPredicted RBP16.91■□□□□ 0.3
SMURF1-201ENST00000361125 IGLV3-9A0A075B6K5 115 aa16.9■□□□□ 0.3
SMURF1-201ENST00000361125 LRRK1Q38SD2 2015 aa16.9■□□□□ 0.3
SMURF1-201ENST00000361125 PI4KAP42356 2102 aa16.9■□□□□ 0.3
SMURF1-201ENST00000361125 Q0VG73 95 aa16.9■□□□□ 0.3
SMURF1-201ENST00000361125 GATA3P23771 443 aa16.9■□□□□ 0.3
SMURF1-201ENST00000361125 MEGF9Q9H1U4 602 aa16.9■□□□□ 0.3
SMURF1-201ENST00000361125 C15orf65H3BRN8 121 aa16.9■□□□□ 0.3
SMURF1-201ENST00000361125 WT1P19544 449 aaPredicted RBP16.9■□□□□ 0.3
SMURF1-201ENST00000361125 CYYR1Q96J86 154 aa16.9■□□□□ 0.3
SMURF1-201ENST00000361125 GVINP1Q7Z2Y8 2422 aa16.9■□□□□ 0.3
SMURF1-201ENST00000361125 NBL1P41271 181 aa16.89■□□□□ 0.3
SMURF1-201ENST00000361125 FAM120AOSQ5T036 256 aa16.89■□□□□ 0.3
SMURF1-201ENST00000361125 TMEM158Q8WZ71 300 aa16.89■□□□□ 0.3
SMURF1-201ENST00000361125 SYS1-DBNDD2H3BUS1 97 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms