RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 MRPL36Q9P0J6 103 aaKnown RBP8.47□□□□□ -1.05
CAPN3-205ENST00000357568 CACNA1GO43497 2377 aa8.46□□□□□ -1.05
CAPN3-205ENST00000357568 SLC25A17O43808 307 aa8.46□□□□□ -1.06
CAPN3-205ENST00000357568 ARMS2P0C7Q2 107 aa8.46□□□□□ -1.06
CAPN3-205ENST00000357568 SMIM13P0DJ93 91 aa8.46□□□□□ -1.06
CAPN3-205ENST00000357568 SRSF1Q07955 248 aaKnown RBP eCLIP8.46□□□□□ -1.06
CAPN3-205ENST00000357568 MSMPQ1L6U9 139 aa8.46□□□□□ -1.06
CAPN3-205ENST00000357568 E7EUB6 86 aa8.46□□□□□ -1.06
CAPN3-205ENST00000357568 CSN3P07498 182 aa8.46□□□□□ -1.06
CAPN3-205ENST00000357568 UQCRFS1P47985 274 aa8.46□□□□□ -1.06
CAPN3-205ENST00000357568 CRYBA4P53673 196 aa8.46□□□□□ -1.06
CAPN3-205ENST00000357568 FOXI2Q6ZQN5 318 aa8.46□□□□□ -1.06
CAPN3-205ENST00000357568 COX8CQ7Z4L0 72 aa8.46□□□□□ -1.06
CAPN3-205ENST00000357568 TPRP12270 2363 aaKnown RBP8.45□□□□□ -1.06
CAPN3-205ENST00000357568 A0A1W2PPI3 338 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 MBD3L4A6NDZ8 208 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-205ENST00000357568 MBD3L3A6NE82 208 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-205ENST00000357568 FBLL1A6NHQ2 334 aaKnown RBP8.45□□□□□ -1.06
CAPN3-205ENST00000357568 MBD3L5A6NJ08 208 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-205ENST00000357568 H0Y8G0 127 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 J3QR89 54 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 PLAUP00749 431 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 PPIAL4GP0DN37 164 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 FOXE3Q13461 319 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 ORMDL3Q8N138 153 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 CNEP1R1Q8N9A8 125 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 MBD3L2Q8NHZ7 208 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-205ENST00000357568 SRSF12Q8WXF0 261 aaKnown RBP8.45□□□□□ -1.06
CAPN3-205ENST00000357568 ZNF414Q96IQ9 312 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 VKORC1Q9BQB6 163 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 MCRIP2Q9BUT9 160 aaKnown RBP8.45□□□□□ -1.06
CAPN3-205ENST00000357568 THYN1Q9P016 225 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 INSIG2Q9Y5U4 225 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 CACNA1BQ00975 2339 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 TRAV26-1A0A087WT03 109 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 ZNF785A8K8V0 405 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 ZNF207O43670 478 aaKnown RBP8.45□□□□□ -1.06
CAPN3-205ENST00000357568 TM4SF20Q53R12 229 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 SAMD5Q5TGI4 173 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 FAM104BQ5XKR9 115 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 IFI27L1Q96BM0 104 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 SGK494Q96LW2 274 aa8.45□□□□□ -1.06
CAPN3-205ENST00000357568 SLC25A39Q9BZJ4 359 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-205ENST00000357568 PRNTQ86SH4 94 aa8.44□□□□□ -1.06
CAPN3-205ENST00000357568 C9orf106Q8NAJ2 232 aa8.44□□□□□ -1.06
CAPN3-205ENST00000357568 RND1Q92730 232 aa8.44□□□□□ -1.06
CAPN3-205ENST00000357568 ZC2HC1AQ96GY0 325 aa8.44□□□□□ -1.06
CAPN3-205ENST00000357568 RITA1Q96K30 269 aa8.44□□□□□ -1.06
CAPN3-205ENST00000357568 ZMAT4Q9H898 229 aa8.44□□□□□ -1.06
CAPN3-205ENST00000357568 PROCRQ9UNN8 238 aa8.44□□□□□ -1.06
CAPN3-205ENST00000357568 IFI27P40305 119 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-205ENST00000357568 SPRNQ5BIV9 151 aa8.44□□□□□ -1.06
CAPN3-205ENST00000357568 GOLT1AQ6ZVE7 132 aa8.44□□□□□ -1.06
CAPN3-205ENST00000357568 OR8A1Q8NGG7 326 aa8.44□□□□□ -1.06
CAPN3-205ENST00000357568 PRELID3AQ96N28 172 aa8.44□□□□□ -1.06
CAPN3-205ENST00000357568 SIGMAR1Q99720 223 aa8.44□□□□□ -1.06
CAPN3-205ENST00000357568 FAM215AQ9Y5M1 114 aa8.44□□□□□ -1.06
CAPN3-205ENST00000357568 BSNQ9UPA5 3926 aa8.44□□□□□ -1.06
CAPN3-205ENST00000357568 F8W1H4 67 aa8.43□□□□□ -1.06
CAPN3-205ENST00000357568 CACNG7P62955 275 aa8.43□□□□□ -1.06
CAPN3-205ENST00000357568 TAL2Q16559 108 aa8.43□□□□□ -1.06
CAPN3-205ENST00000357568 MRGPRG-AS1Q2M3A8 158 aa8.43□□□□□ -1.06
CAPN3-205ENST00000357568 SHISA2Q6UWI4 295 aa8.43□□□□□ -1.06
CAPN3-205ENST00000357568 ATP6V0BQ99437 205 aa8.43□□□□□ -1.06
CAPN3-205ENST00000357568 SRSF8Q9BRL6 282 aaKnown RBP8.43□□□□□ -1.06
CAPN3-205ENST00000357568 PSG8Q9UQ74 426 aa8.43□□□□□ -1.06
CAPN3-205ENST00000357568 MGAQ8IWI9 3026 aa8.43□□□□□ -1.06
CAPN3-205ENST00000357568 DNAJC13O75165 2243 aa8.43□□□□□ -1.06
CAPN3-205ENST00000357568 TRBV19A0A075B6N1 114 aa8.43□□□□□ -1.06
CAPN3-205ENST00000357568 SPRY3O43610 288 aa8.43□□□□□ -1.06
CAPN3-205ENST00000357568 TNFAIP6P98066 277 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-205ENST00000357568 SRSF2Q01130 221 aaKnown RBP8.43□□□□□ -1.06
CAPN3-205ENST00000357568 CCL13Q99616 98 aa8.43□□□□□ -1.06
CAPN3-205ENST00000357568 VGLL1Q99990 258 aa8.43□□□□□ -1.06
CAPN3-205ENST00000357568 TM2D2Q9BX73 214 aa8.43□□□□□ -1.06
CAPN3-205ENST00000357568 CFAP47Q6ZTR5 3102 aa8.43□□□□□ -1.06
CAPN3-205ENST00000357568 DOCK7Q96N67 2140 aa8.43□□□□□ -1.06
CAPN3-205ENST00000357568 PPIAL4EA0A075B759 164 aa8.42□□□□□ -1.06
CAPN3-205ENST00000357568 PPIAL4CA0A0B4J2A2 164 aa8.42□□□□□ -1.06
CAPN3-205ENST00000357568 PPIAL4FP0DN26 164 aa8.42□□□□□ -1.06
CAPN3-205ENST00000357568 GNLYP22749 145 aa8.42□□□□□ -1.06
CAPN3-205ENST00000357568 C10orf55Q5SWW7 151 aa8.42□□□□□ -1.06
CAPN3-205ENST00000357568 DUX4L9Q6RFH8 374 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-205ENST00000357568 FAM216BQ8N7L0 139 aa8.42□□□□□ -1.06
CAPN3-205ENST00000357568 SPATA25Q9BR10 227 aa8.42□□□□□ -1.06
CAPN3-205ENST00000357568 HILPDAQ9Y5L2 63 aa8.42□□□□□ -1.06
CAPN3-205ENST00000357568 LOC400499M0QZD8 3231 aa8.42□□□□□ -1.06
CAPN3-205ENST00000357568 D6R8Y8 96 aa8.42□□□□□ -1.06
CAPN3-205ENST00000357568 SNAI2O43623 268 aa8.42□□□□□ -1.06
CAPN3-205ENST00000357568 CRYGBP07316 175 aa8.42□□□□□ -1.06
CAPN3-205ENST00000357568 RPL27AP46776 148 aaKnown RBP8.42□□□□□ -1.06
CAPN3-205ENST00000357568 RAB9AP51151 201 aa8.42□□□□□ -1.06
CAPN3-205ENST00000357568 PDE6HQ13956 83 aa8.42□□□□□ -1.06
CAPN3-205ENST00000357568 CD300EQ496F6 205 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-205ENST00000357568 SHANK2-AS3Q9BTD1 123 aa8.42□□□□□ -1.06
CAPN3-205ENST00000357568 NGBQ9NPG2 151 aa8.42□□□□□ -1.06
CAPN3-205ENST00000357568 F11RQ9Y624 299 aaKnown RBP8.42□□□□□ -1.06
CAPN3-205ENST00000357568 CELSR3Q9NYQ7 3312 aa8.41□□□□□ -1.06
CAPN3-205ENST00000357568 COL6A6A6NMZ7 2263 aa8.41□□□□□ -1.06
CAPN3-205ENST00000357568 IGHV1-46P01743 117 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms