RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 PVRIGQ6DKI7 326 aa10.04□□□□□ -0.8
RTFDC1-202ENST00000357348 VMO1Q7Z5L0 202 aa10.04□□□□□ -0.8
RTFDC1-202ENST00000357348 DEFB125Q8N687 156 aa10.04□□□□□ -0.8
RTFDC1-202ENST00000357348 OR5AN1Q8NGI8 311 aa10.04□□□□□ -0.8
RTFDC1-202ENST00000357348 Q96MF0 132 aa10.04□□□□□ -0.8
RTFDC1-202ENST00000357348 MRPL20Q9BYC9 149 aaKnown RBP10.04□□□□□ -0.8
RTFDC1-202ENST00000357348 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.04□□□□□ -0.82e-6■■■■■ 31.6
RTFDC1-202ENST00000357348 A8MWL6 223 aa10.03□□□□□ -0.8
RTFDC1-202ENST00000357348 ENSAO43768 121 aaKnown RBP10.03□□□□□ -0.8
RTFDC1-202ENST00000357348 OR4C5Q8NGB2 326 aa10.03□□□□□ -0.8
RTFDC1-202ENST00000357348 GTSF1Q8WW33 167 aa10.03□□□□□ -0.8
RTFDC1-202ENST00000357348 NDFIP1Q9BT67 221 aa10.03□□□□□ -0.8
RTFDC1-202ENST00000357348 E7EUB6 86 aa10.03□□□□□ -0.8
RTFDC1-202ENST00000357348 NPIPB6E9PJ23 425 aa10.03□□□□□ -0.8
RTFDC1-202ENST00000357348 LTAP01374 205 aa10.03□□□□□ -0.8
RTFDC1-202ENST00000357348 GNG5P63218 68 aa10.03□□□□□ -0.8
RTFDC1-202ENST00000357348 PAX2Q02962 417 aa10.03□□□□□ -0.8
RTFDC1-202ENST00000357348 MPV17L2Q567V2 206 aa10.03□□□□□ -0.8
RTFDC1-202ENST00000357348 PRR27Q6MZM9 219 aa10.03□□□□□ -0.8
RTFDC1-202ENST00000357348 PET117Q6UWS5 81 aa10.03□□□□□ -0.8
RTFDC1-202ENST00000357348 LINC00322Q6ZN03 302 aaPredicted RBP10.03□□□□□ -0.8
RTFDC1-202ENST00000357348 NPIPB3Q92617 1050 aa10.03□□□□□ -0.8
RTFDC1-202ENST00000357348 MS4A6AQ9H2W1 248 aa10.03□□□□□ -0.8
RTFDC1-202ENST00000357348 FLNAP21333 2647 aaKnown RBP10.02□□□□□ -0.8
RTFDC1-202ENST00000357348 SH2D7A6NKC9 451 aaPredicted RBP10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 MOSP00540 346 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 APOA2P02652 100 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 DSCR9P59020 149 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 WT1-ASQ06250 92 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 SLC25A34Q6PIV7 304 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 TCF24Q7RTU0 167 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 PDPNQ86YL7 162 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 FMC1Q96HJ9 113 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 HARBI1Q96MB7 349 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 SCRT2Q9NQ03 307 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 ABCA1O95477 2261 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 IGHV3OR16-10A0A075B7F0 116 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 TOX4O94842 621 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 CRYGCP07315 174 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 C16orf54Q6UWD8 224 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 LINC00173Q6ZV60 143 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 LINC00305Q7Z4B0 112 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 WFDC11Q8NEX6 87 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 TMEM191AQ9H0A3 160 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 CSPG4Q6UVK1 2322 aa10.02□□□□□ -0.81
RTFDC1-202ENST00000357348 CREBBPQ92793 2442 aa10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 TLN2Q9Y4G6 2542 aa10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 AKAP9Q99996 3911 aa10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 FLNBO75369 2602 aaKnown RBP10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 LEPROTL1O95214 131 aa10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 SLC25A16P16260 332 aa10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 SUB1P53999 127 aaKnown RBP eCLIP10.01□□□□□ -0.812e-7■■■■□ 25.1
RTFDC1-202ENST00000357348 COTL1Q14019 142 aa10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 FAM71F2Q6NXP2 309 aa10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 C12orf54Q6X4T0 127 aa10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 VSTM2AQ8TAG5 236 aa10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 MRPL36Q9P0J6 103 aaKnown RBP10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 LOC102724200A0A096LPH7 203 aaPredicted RBP10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 IGHV3-72A0A0B4J1Y9 119 aa10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 PGPA6NDG6 321 aa10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 APOHP02749 345 aaPredicted RBP10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 SLC25A5P05141 298 aaKnown RBP10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 RBPMS2Q6ZRY4 209 aaKnown RBP10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 LHFPL4Q7Z7J7 247 aa10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 KRTAP1-3Q8IUG1 177 aa10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 C5orf17Q8NAS9 161 aa10.01□□□□□ -0.81
RTFDC1-202ENST00000357348 MYO9AB2RTY4 2548 aa10□□□□□ -0.81
RTFDC1-202ENST00000357348 hDV102S1A0JD36 115 aa10□□□□□ -0.81
RTFDC1-202ENST00000357348 M0R1W7 72 aa10□□□□□ -0.81
RTFDC1-202ENST00000357348 IGLV2-23P01705 113 aa10□□□□□ -0.81
RTFDC1-202ENST00000357348 FOXA3P55318 350 aaPredicted RBP10□□□□□ -0.81
RTFDC1-202ENST00000357348 VAMP3Q15836 100 aa10□□□□□ -0.81
RTFDC1-202ENST00000357348 LDLRAD2Q5SZI1 272 aa10□□□□□ -0.81
RTFDC1-202ENST00000357348 LRRC75A-AS1Q8N1F1 130 aa10□□□□□ -0.81
RTFDC1-202ENST00000357348 GATD1Q8NB37 220 aa10□□□□□ -0.81
RTFDC1-202ENST00000357348 TNFRSF14Q92956 283 aa10□□□□□ -0.81
RTFDC1-202ENST00000357348 FLYWCH2Q96CP2 140 aaKnown RBP10□□□□□ -0.81
RTFDC1-202ENST00000357348 SIRPDQ9H106 197 aa10□□□□□ -0.81
RTFDC1-202ENST00000357348 HILPDAQ9Y5L2 63 aa10□□□□□ -0.81
RTFDC1-202ENST00000357348 A0A096LNT2 108 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 HAX1O00165 279 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 CD5LO43866 347 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 NUDT3O95989 172 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 IGLV1-47P01700 117 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 P01737 135 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 MSMBP08118 114 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 GP9P14770 177 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 PRTN3P24158 256 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 PLP1P60201 277 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 HCP5Q6MZN7 132 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 ST6GALNAC6Q969X2 333 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 TRGV9Q99603 122 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 HIF1ANQ9NWT6 349 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 TP73-AS1Q9UF72 201 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 INSIG2Q9Y5U4 225 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 ACANP16112 2415 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 TRBV6-1A0A0K0K1D8 114 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 BUB1B-PAK6H3BSN5 160 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 M0QZ24 198 aa9.99□□□□□ -0.81
RTFDC1-202ENST00000357348 SMAD7O15105 426 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms