RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 TANC2Q9HCD6 1990 aa14.85□□□□□ -0.03
SCARF1-202ENST00000348987 NBASA2RRP1 2371 aa14.85□□□□□ -0.03
SCARF1-202ENST00000348987 PRSS47A8MTI9 375 aa14.85□□□□□ -0.03
SCARF1-202ENST00000348987 SIVA1O15304 175 aa14.85□□□□□ -0.03
SCARF1-202ENST00000348987 LGALS9BQ3B8N2 356 aa14.85□□□□□ -0.03
SCARF1-202ENST00000348987 LGALS9CQ6DKI2 356 aa14.85□□□□□ -0.03
SCARF1-202ENST00000348987 CEACAM4O75871 244 aa14.84□□□□□ -0.03
SCARF1-202ENST00000348987 GATA4P43694 442 aa14.84□□□□□ -0.03
SCARF1-202ENST00000348987 Q86TA4 180 aa14.84□□□□□ -0.03
SCARF1-202ENST00000348987 TSSC4Q9Y5U2 329 aaPredicted RBP14.84□□□□□ -0.03
SCARF1-202ENST00000348987 TPRP12270 2363 aaKnown RBP14.84□□□□□ -0.03
SCARF1-202ENST00000348987 C22orf46C9J442 243 aa14.84□□□□□ -0.03
SCARF1-202ENST00000348987 SLC25A48Q6ZT89 311 aaKnown RBP14.84□□□□□ -0.03
SCARF1-202ENST00000348987 THAP8Q8NA92 274 aa14.84□□□□□ -0.03
SCARF1-202ENST00000348987 COL25A1Q9BXS0 654 aaPredicted RBP14.84□□□□□ -0.03
SCARF1-202ENST00000348987 SMPXQ9UHP9 88 aa14.84□□□□□ -0.03
SCARF1-202ENST00000348987 SH3BGRL2Q9UJC5 107 aa14.84□□□□□ -0.03
SCARF1-202ENST00000348987 ZZEF1O43149 2961 aa14.84□□□□□ -0.03
SCARF1-202ENST00000348987 CGB1A6NKQ9 187 aa14.83□□□□□ -0.03
SCARF1-202ENST00000348987 SMIM13P0DJ93 91 aa14.83□□□□□ -0.03
SCARF1-202ENST00000348987 CEACAM3P40198 252 aa14.83□□□□□ -0.03
SCARF1-202ENST00000348987 PSG3Q16557 428 aa14.83□□□□□ -0.03
SCARF1-202ENST00000348987 TLN1Q9Y490 2541 aaKnown RBP14.83□□□□□ -0.04
SCARF1-202ENST00000348987 SCGB1A1P11684 91 aa14.83□□□□□ -0.04
SCARF1-202ENST00000348987 GP9P14770 177 aa14.83□□□□□ -0.04
SCARF1-202ENST00000348987 RIGQ13278 110 aa14.83□□□□□ -0.04
SCARF1-202ENST00000348987 ZNF788Q6ZQV5 615 aa14.83□□□□□ -0.04
SCARF1-202ENST00000348987 SIGLEC8Q9NYZ4 499 aa14.83□□□□□ -0.04
SCARF1-202ENST00000348987 ABCA1O95477 2261 aa14.82□□□□□ -0.04
SCARF1-202ENST00000348987 ZNF785A8K8V0 405 aa14.82□□□□□ -0.04
SCARF1-202ENST00000348987 GCSHP23434 173 aa14.82□□□□□ -0.04
SCARF1-202ENST00000348987 C16orf54Q6UWD8 224 aa14.82□□□□□ -0.04
SCARF1-202ENST00000348987 GOLT1AQ6ZVE7 132 aa14.82□□□□□ -0.04
SCARF1-202ENST00000348987 C18orf15Q96N68 181 aa14.82□□□□□ -0.04
SCARF1-202ENST00000348987 SSUH2Q9Y2M2 353 aa14.82□□□□□ -0.04
SCARF1-202ENST00000348987 SPTA1P02549 2419 aa14.82□□□□□ -0.04
SCARF1-202ENST00000348987 CSMD1Q96PZ7 3565 aa14.82□□□□□ -0.04
SCARF1-202ENST00000348987 TMEM189A5PLL7 270 aa14.82□□□□□ -0.04
SCARF1-202ENST00000348987 K7ERJ3 54 aa14.82□□□□□ -0.04
SCARF1-202ENST00000348987 FCN3O75636 299 aa14.82□□□□□ -0.04
SCARF1-202ENST00000348987 FXYD2P54710 66 aa14.82□□□□□ -0.04
SCARF1-202ENST00000348987 MRPL20Q9BYC9 149 aaKnown RBP14.82□□□□□ -0.04
SCARF1-202ENST00000348987 RPUSD1Q9UJJ7 312 aaKnown RBP14.82□□□□□ -0.04
SCARF1-202ENST00000348987 A0A1B0GV72 72 aa14.81□□□□□ -0.04
SCARF1-202ENST00000348987 GAGE12HA6NDE8 117 aa14.81□□□□□ -0.04
SCARF1-202ENST00000348987 D6R8Y8 96 aa14.81□□□□□ -0.04
SCARF1-202ENST00000348987 IGLV2-11P01706 119 aa14.81□□□□□ -0.04
SCARF1-202ENST00000348987 CCL3L1P16619 93 aa14.81□□□□□ -0.04
SCARF1-202ENST00000348987 EXOC3-AS1Q8N2X6 119 aa14.81□□□□□ -0.04
SCARF1-202ENST00000348987 RAB9BQ9NP90 201 aa14.81□□□□□ -0.04
SCARF1-202ENST00000348987 SERTM2A0A1B0GWG4 89 aa14.81□□□□□ -0.04
SCARF1-202ENST00000348987 CD40P25942 277 aa14.81□□□□□ -0.04
SCARF1-202ENST00000348987 ZNF414Q96IQ9 312 aa14.81□□□□□ -0.04
SCARF1-202ENST00000348987 ATP6V0BQ99437 205 aa14.81□□□□□ -0.04
SCARF1-202ENST00000348987 LRBAP50851 2863 aa14.81□□□□□ -0.04
SCARF1-202ENST00000348987 IGHV3-21A0A0B4J1V1 117 aa14.8□□□□□ -0.04
SCARF1-202ENST00000348987 CD300EQ496F6 205 aaPredicted RBP14.8□□□□□ -0.04
SCARF1-202ENST00000348987 WFDC3Q8IUB2 231 aa14.8□□□□□ -0.04
SCARF1-202ENST00000348987 BCL6BQ8N143 479 aaPredicted RBP14.8□□□□□ -0.04
SCARF1-202ENST00000348987 OSR1Q8TAX0 266 aaPredicted RBP14.8□□□□□ -0.04
SCARF1-202ENST00000348987 DIAPH2-AS1Q14236 149 aa14.8□□□□□ -0.04
SCARF1-202ENST00000348987 VGLL1Q99990 258 aa14.8□□□□□ -0.04
SCARF1-202ENST00000348987 TTTY13Q9BZ97 58 aa14.8□□□□□ -0.04
SCARF1-202ENST00000348987 DKK2Q9UBU2 259 aa14.8□□□□□ -0.04
SCARF1-202ENST00000348987 SUB1P53999 127 aaKnown RBP eCLIP14.79□□□□□ -0.04
SCARF1-202ENST00000348987 DCHS2Q6V1P9 2916 aa14.79□□□□□ -0.04
SCARF1-202ENST00000348987 HCP5Q6MZN7 132 aa14.79□□□□□ -0.04
SCARF1-202ENST00000348987 K7EMI3 77 aa14.78□□□□□ -0.04
SCARF1-202ENST00000348987 WFDC2Q14508 124 aa14.78□□□□□ -0.04
SCARF1-202ENST00000348987 Q6ZS92 163 aa14.78□□□□□ -0.04
SCARF1-202ENST00000348987 WFDC12Q8WWY7 111 aa14.78□□□□□ -0.04
SCARF1-202ENST00000348987 LINC00574Q9H8X3 128 aa14.78□□□□□ -0.04
SCARF1-202ENST00000348987 IFI27L1Q96BM0 104 aa14.78□□□□□ -0.04
SCARF1-202ENST00000348987 IGF2RP11717 2491 aa14.77□□□□□ -0.04
SCARF1-202ENST00000348987 INS-IGF2F8WCM5 200 aa14.77□□□□□ -0.04
SCARF1-202ENST00000348987 APELAP0DMC3 54 aa14.77□□□□□ -0.04
SCARF1-202ENST00000348987 CCDC144NLQ6NUI1 221 aa14.77□□□□□ -0.04
SCARF1-202ENST00000348987 PRELID3AQ96N28 172 aa14.77□□□□□ -0.04
SCARF1-202ENST00000348987 HBDP02042 147 aa14.77□□□□□ -0.05
SCARF1-202ENST00000348987 RAB9AP51151 201 aa14.77□□□□□ -0.05
SCARF1-202ENST00000348987 IGFL3Q6UXB1 125 aa14.77□□□□□ -0.05
SCARF1-202ENST00000348987 AMN1Q8IY45 258 aa14.77□□□□□ -0.05
SCARF1-202ENST00000348987 GATD1Q8NB37 220 aa14.77□□□□□ -0.05
SCARF1-202ENST00000348987 IGKV2D-26A0A0A0MRZ7 120 aa14.76□□□□□ -0.05
SCARF1-202ENST00000348987 IGF2-ASQ6U949 168 aa14.76□□□□□ -0.05
SCARF1-202ENST00000348987 TMEM213A2RRL7 107 aa14.76□□□□□ -0.05
SCARF1-202ENST00000348987 ZNF833PQ6ZTB9 187 aa14.76□□□□□ -0.05
SCARF1-202ENST00000348987 OTORQ9NRC9 128 aa14.76□□□□□ -0.05
SCARF1-202ENST00000348987 SPANXB1Q9NS25 103 aaPredicted RBP14.76□□□□□ -0.05
SCARF1-202ENST00000348987 SVEP1Q4LDE5 3571 aa14.75□□□□□ -0.05
SCARF1-202ENST00000348987 A0A1W2PPI3 338 aa14.75□□□□□ -0.05
SCARF1-202ENST00000348987 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.75□□□□□ -0.05
SCARF1-202ENST00000348987 SH2D6Q7Z4S9 175 aa14.75□□□□□ -0.05
SCARF1-202ENST00000348987 TMEM167AQ8TBQ9 72 aa14.75□□□□□ -0.05
SCARF1-202ENST00000348987 TMEM238LA0A1B0GVL6 79 aa14.75□□□□□ -0.05
SCARF1-202ENST00000348987 CRIP1P50238 77 aa14.75□□□□□ -0.05
SCARF1-202ENST00000348987 TEX36Q5VZQ5 186 aa14.75□□□□□ -0.05
SCARF1-202ENST00000348987 C8orf46Q8TAG6 207 aa14.75□□□□□ -0.05
SCARF1-202ENST00000348987 NHP2Q9NX24 153 aaKnown RBP14.75□□□□□ -0.05
SCARF1-202ENST00000348987 LINC00312Q9Y6C7 94 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms