RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 WBP1Q96G27 269 aa15.97■□□□□ 0.15
HDAC4-201ENST00000345617 INSP01308 110 aa15.97■□□□□ 0.15
HDAC4-201ENST00000345617 ZC2HC1BQ5TFG8 222 aa15.97■□□□□ 0.15
HDAC4-201ENST00000345617 C15orf32Q32M92 178 aa15.97■□□□□ 0.15
HDAC4-201ENST00000345617 LYZL1Q6UWQ5 148 aa15.97■□□□□ 0.15
HDAC4-201ENST00000345617 RPP25LQ8N5L8 163 aaKnown RBP15.97■□□□□ 0.15
HDAC4-201ENST00000345617 TMEM256Q8N2U0 113 aa15.97■□□□□ 0.15
HDAC4-201ENST00000345617 TRAV13-2A0A0B4J235 113 aa15.97■□□□□ 0.15
HDAC4-201ENST00000345617 RFNGQ9Y644 331 aa15.97■□□□□ 0.15
HDAC4-201ENST00000345617 FCN3O75636 299 aa15.96■□□□□ 0.15
HDAC4-201ENST00000345617 CSTL1Q9H114 145 aa15.96■□□□□ 0.15
HDAC4-201ENST00000345617 ZNF319Q9P2F9 582 aa15.96■□□□□ 0.15
HDAC4-201ENST00000345617 PMS2P5A8MQ11 134 aa15.96■□□□□ 0.15
HDAC4-201ENST00000345617 TMEM158Q8WZ71 300 aa15.96■□□□□ 0.15
HDAC4-201ENST00000345617 GAGE12HA6NDE8 117 aa15.96■□□□□ 0.15
HDAC4-201ENST00000345617 FAM216BQ8N7L0 139 aa15.96■□□□□ 0.15
HDAC4-201ENST00000345617 PRSS22Q9GZN4 317 aa15.96■□□□□ 0.15
HDAC4-201ENST00000345617 A0A1B0GWJ7 208 aa15.96■□□□□ 0.15
HDAC4-201ENST00000345617 RHODO00212 210 aa15.96■□□□□ 0.15
HDAC4-201ENST00000345617 SUPT4H1P63272 117 aaKnown RBP15.96■□□□□ 0.15
HDAC4-201ENST00000345617 C6orf226Q5I0X4 101 aa15.96■□□□□ 0.15
HDAC4-201ENST00000345617 MRAPQ8TCY5 172 aa15.96■□□□□ 0.15
HDAC4-201ENST00000345617 CYTL1Q9NRR1 136 aa15.96■□□□□ 0.15
HDAC4-201ENST00000345617 NABP1Q96AH0 204 aa15.96■□□□□ 0.14
HDAC4-201ENST00000345617 SNHG12Q9BXW3 62 aa15.95■□□□□ 0.14
HDAC4-201ENST00000345617 ZNF883P0CG24 379 aa15.95■□□□□ 0.14
HDAC4-201ENST00000345617 MINOS1Q5TGZ0 78 aa15.95■□□□□ 0.14
HDAC4-201ENST00000345617 MINOS1-NBL1R4GNA1 71 aa15.95■□□□□ 0.14
HDAC4-201ENST00000345617 FAM223BA6NKX1 122 aa15.95■□□□□ 0.14
HDAC4-201ENST00000345617 PRIMA1Q86XR5 153 aa15.95■□□□□ 0.14
HDAC4-201ENST00000345617 FAM223AQ8IWN6 122 aa15.95■□□□□ 0.14
HDAC4-201ENST00000345617 GAGE12JA6NER3 117 aa15.94■□□□□ 0.14
HDAC4-201ENST00000345617 GAGE7O76087 117 aa15.94■□□□□ 0.14
HDAC4-201ENST00000345617 GAGE12FP0CL80 117 aa15.94■□□□□ 0.14
HDAC4-201ENST00000345617 GAGE12GP0CL81 117 aa15.94■□□□□ 0.14
HDAC4-201ENST00000345617 GAGE12IP0CL82 117 aa15.94■□□□□ 0.14
HDAC4-201ENST00000345617 GAGE4Q13068 117 aa15.94■□□□□ 0.14
HDAC4-201ENST00000345617 RCHY1Q96PM5 261 aa15.94■□□□□ 0.14
HDAC4-201ENST00000345617 LOC102723996A0A087X1L8 192 aa15.94■□□□□ 0.14
HDAC4-201ENST00000345617 A0A1W2PPM0 123 aa15.94■□□□□ 0.14
HDAC4-201ENST00000345617 SRRM4A7MD48 611 aaKnown RBP15.94■□□□□ 0.14
HDAC4-201ENST00000345617 CDCP2Q5VXM1 449 aa15.94■□□□□ 0.14
HDAC4-201ENST00000345617 COLCA1Q6ZS62 124 aa15.93■□□□□ 0.14
HDAC4-201ENST00000345617 STPG1Q5TH74 334 aa15.93■□□□□ 0.14
HDAC4-201ENST00000345617 TRPT1Q86TN4 253 aaKnown RBP15.93■□□□□ 0.14
HDAC4-201ENST00000345617 NUP210LQ5VU65 1888 aa15.93■□□□□ 0.14
HDAC4-201ENST00000345617 LCN12Q6JVE5 192 aa15.93■□□□□ 0.14
HDAC4-201ENST00000345617 SH2D1AO60880 128 aa15.93■□□□□ 0.14
HDAC4-201ENST00000345617 COX8AP10176 69 aa15.93■□□□□ 0.14
HDAC4-201ENST00000345617 EGR2P11161 476 aaPredicted RBP15.93■□□□□ 0.14
HDAC4-201ENST00000345617 CFPP27918 469 aa15.93■□□□□ 0.14
HDAC4-201ENST00000345617 EXOC3-AS1Q8N2X6 119 aa15.93■□□□□ 0.14
HDAC4-201ENST00000345617 LSM4Q9Y4Z0 139 aaKnown RBP15.92■□□□□ 0.14
HDAC4-201ENST00000345617 NCR2O95944 276 aa15.92■□□□□ 0.14
HDAC4-201ENST00000345617 S4R3C0 116 aa15.92■□□□□ 0.14
HDAC4-201ENST00000345617 ZNF492Q9P255 531 aa15.92■□□□□ 0.14
HDAC4-201ENST00000345617 POLR3KQ9Y2Y1 108 aaPredicted RBP15.92■□□□□ 0.14
HDAC4-201ENST00000345617 WNT2P09544 360 aa15.92■□□□□ 0.14
HDAC4-201ENST00000345617 SMIM20Q8N5G0 67 aa15.92■□□□□ 0.14
HDAC4-201ENST00000345617 PRR19A6NJB7 356 aa15.91■□□□□ 0.14
HDAC4-201ENST00000345617 PPP1R32Q7Z5V6 425 aa15.91■□□□□ 0.14
HDAC4-201ENST00000345617 SIGLEC12Q96PQ1 595 aa15.91■□□□□ 0.14
HDAC4-201ENST00000345617 ATG2AQ2TAZ0 1938 aa15.91■□□□□ 0.14
HDAC4-201ENST00000345617 IGKV1-9A0A0C4DH69 117 aa15.91■□□□□ 0.14
HDAC4-201ENST00000345617 NDUFB8O95169 186 aa15.91■□□□□ 0.14
HDAC4-201ENST00000345617 IGKV2-40A0A087WW87 121 aaPredicted RBP15.91■□□□□ 0.14
HDAC4-201ENST00000345617 IGKV2D-40P01614 121 aaPredicted RBP15.91■□□□□ 0.14
HDAC4-201ENST00000345617 PAQR4Q8N4S7 273 aaPredicted RBP15.91■□□□□ 0.14
HDAC4-201ENST00000345617 INS-IGF2F8WCM5 200 aa15.91■□□□□ 0.14
HDAC4-201ENST00000345617 ZNF329Q86UD4 541 aa15.9■□□□□ 0.14
HDAC4-201ENST00000345617 GLMPQ8WWB7 406 aa15.9■□□□□ 0.14
HDAC4-201ENST00000345617 PRO1854Q9UHT4 67 aa15.9■□□□□ 0.14
HDAC4-201ENST00000345617 Q86TA4 180 aa15.9■□□□□ 0.14
HDAC4-201ENST00000345617 CDKN1BP46527 198 aa15.9■□□□□ 0.14
HDAC4-201ENST00000345617 DSCR9P59020 149 aa15.9■□□□□ 0.14
HDAC4-201ENST00000345617 NPC2P61916 151 aa15.9■□□□□ 0.14
HDAC4-201ENST00000345617 MYO9AB2RTY4 2548 aa15.89■□□□□ 0.14
HDAC4-201ENST00000345617 A0A0A6YYD4 124 aa15.89■□□□□ 0.13
HDAC4-201ENST00000345617 IGHV1-2P23083 117 aa15.89■□□□□ 0.13
HDAC4-201ENST00000345617 GAGE5Q13069 117 aa15.89■□□□□ 0.13
HDAC4-201ENST00000345617 GAGE6Q13070 117 aa15.89■□□□□ 0.13
HDAC4-201ENST00000345617 ZNF876PQ49A33 203 aa15.89■□□□□ 0.13
HDAC4-201ENST00000345617 SRRM5B3KS81 715 aa15.89■□□□□ 0.13
HDAC4-201ENST00000345617 PRSS46E5RG02 174 aa15.89■□□□□ 0.13
HDAC4-201ENST00000345617 DMRTC2Q8IXT2 367 aaPredicted RBP15.89■□□□□ 0.13
HDAC4-201ENST00000345617 TRAV41A0A0B4J266 112 aa15.89■□□□□ 0.13
HDAC4-201ENST00000345617 LIME1Q9H400 295 aa15.89■□□□□ 0.13
HDAC4-201ENST00000345617 C7orf69Q9H7B7 122 aa15.89■□□□□ 0.13
HDAC4-201ENST00000345617 TCTEX1D4Q5JR98 221 aa15.89■□□□□ 0.13
HDAC4-201ENST00000345617 PTPRBP23467 1997 aa15.88■□□□□ 0.13
HDAC4-201ENST00000345617 ANKRD29Q8N6D5 301 aa15.88■□□□□ 0.13
HDAC4-201ENST00000345617 KLHDC3Q9BQ90 382 aa15.88■□□□□ 0.13
HDAC4-201ENST00000345617 TECTAO75443 2155 aa15.88■□□□□ 0.13
HDAC4-201ENST00000345617 C10orf91Q5T1B1 145 aa15.88■□□□□ 0.13
HDAC4-201ENST00000345617 VSIRQ9H7M9 311 aa15.88■□□□□ 0.13
HDAC4-201ENST00000345617 CACNA1AO00555 2505 aa15.88■□□□□ 0.13
HDAC4-201ENST00000345617 SPATA25Q9BR10 227 aa15.88■□□□□ 0.13
HDAC4-201ENST00000345617 CEND1Q8N111 149 aa15.88■□□□□ 0.13
HDAC4-201ENST00000345617 NAA38Q9BRA0 125 aaKnown RBP15.88■□□□□ 0.13
HDAC4-201ENST00000345617 ACACBO00763 2458 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms