RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 CELSR2Q9HCU4 2923 aa10.13□□□□□ -0.79
CLK3-201ENST00000345005 GGTLC3B5MD39 225 aa10.12□□□□□ -0.79
CLK3-201ENST00000345005 F2Z2F3 143 aa10.12□□□□□ -0.79
CLK3-201ENST00000345005 MFAP2P55001 183 aa10.12□□□□□ -0.79
CLK3-201ENST00000345005 DEFB113Q30KQ7 82 aa10.12□□□□□ -0.79
CLK3-201ENST00000345005 FBLN7Q53RD9 439 aa10.12□□□□□ -0.79
CLK3-201ENST00000345005 FAM120AOSQ5T036 256 aa10.12□□□□□ -0.79
CLK3-201ENST00000345005 LINC01356Q8N9X3 169 aa10.12□□□□□ -0.79
CLK3-201ENST00000345005 THAP8Q8NA92 274 aa10.12□□□□□ -0.79
CLK3-201ENST00000345005 C18orf32Q8TCD1 76 aa10.12□□□□□ -0.79
CLK3-201ENST00000345005 NPIPB3Q92617 1050 aa10.12□□□□□ -0.79
CLK3-201ENST00000345005 MBD6Q96DN6 1003 aa10.12□□□□□ -0.79
CLK3-201ENST00000345005 CSTL1Q9H114 145 aa10.12□□□□□ -0.79
CLK3-201ENST00000345005 TSPOP30536 169 aa10.12□□□□□ -0.79
CLK3-201ENST00000345005 MRPL54Q6P161 138 aaKnown RBP10.12□□□□□ -0.79
CLK3-201ENST00000345005 ZNF503Q96F45 646 aa10.12□□□□□ -0.79
CLK3-201ENST00000345005 WNT10AQ9GZT5 417 aa10.12□□□□□ -0.79
CLK3-201ENST00000345005 HIF1ANQ9NWT6 349 aa10.12□□□□□ -0.79
CLK3-201ENST00000345005 UNC79Q9P2D8 2635 aa10.11□□□□□ -0.79
CLK3-201ENST00000345005 A0A096LNT2 108 aa10.11□□□□□ -0.79
CLK3-201ENST00000345005 TRAV40A0A0B4J280 105 aa10.11□□□□□ -0.79
CLK3-201ENST00000345005 UBE2L3P68036 154 aaKnown RBP10.11□□□□□ -0.79
CLK3-201ENST00000345005 LOXL1Q08397 574 aaPredicted RBP10.11□□□□□ -0.79
CLK3-201ENST00000345005 CT83Q5H943 113 aa10.11□□□□□ -0.79
CLK3-201ENST00000345005 RUSC1-AS1Q66K80 236 aa10.11□□□□□ -0.79
CLK3-201ENST00000345005 STPG4Q8N801 248 aa10.11□□□□□ -0.79
CLK3-201ENST00000345005 Q8N9W7 124 aa10.11□□□□□ -0.79
CLK3-201ENST00000345005 OR4C5Q8NGB2 326 aa10.11□□□□□ -0.79
CLK3-201ENST00000345005 ARPC1AQ92747 370 aa10.11□□□□□ -0.79
CLK3-201ENST00000345005 RASL11BQ9BPW5 248 aa10.11□□□□□ -0.79
CLK3-201ENST00000345005 MEGF9Q9H1U4 602 aa10.11□□□□□ -0.79
CLK3-201ENST00000345005 MAP1AP78559 2803 aaPredicted RBP10.11□□□□□ -0.79
CLK3-201ENST00000345005 IGHV3OR16-10A0A075B7F0 116 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 TCRBV4S1A1TA0A5B7 111 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 M0R2Z0 102 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 COX7A2P2O60397 106 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 HLA-DRB1P01911 266 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 UBE2G1P62253 170 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 KIAA1644Q3SXP7 199 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 TMEM116Q8NCL8 245 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 CHCHD1Q96BP2 118 aaKnown RBP10.1□□□□□ -0.79
CLK3-201ENST00000345005 RCHY1Q96PM5 261 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 PAXXQ9BUH6 204 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 NAV2Q8IVL1 2488 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 FAM181BA6NEQ2 426 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 NPIPB5A8MRT5 1133 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 K7ERU9 68 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 PEX7O00628 323 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 OR5AL1P0C617 328 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 CR1P17927 2039 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 NTF3P20783 257 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 C10orf113Q5VZT2 155 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 BRD3OSQ6XYD6 125 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 FAM167A-AS1Q96KT0 104 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 ST20Q9HBF5 79 aa10.1□□□□□ -0.79
CLK3-201ENST00000345005 FBN2P35556 2912 aa10.09□□□□□ -0.79
CLK3-201ENST00000345005 POLQO75417 2590 aa10.09□□□□□ -0.79
CLK3-201ENST00000345005 FAM231BA6NCW3 169 aa10.09□□□□□ -0.79
CLK3-201ENST00000345005 J3QLI3 93 aa10.09□□□□□ -0.79
CLK3-201ENST00000345005 SPINK4O60575 86 aa10.09□□□□□ -0.79
CLK3-201ENST00000345005 IGHV3-48P01763 117 aa10.09□□□□□ -0.79
CLK3-201ENST00000345005 IGHV4-38-2P0DP08 117 aa10.09□□□□□ -0.79
CLK3-201ENST00000345005 TCL1AP56279 114 aa10.09□□□□□ -0.79
CLK3-201ENST00000345005 TCF24Q7RTU0 167 aa10.09□□□□□ -0.79
CLK3-201ENST00000345005 TTC9CQ8N5M4 171 aa10.09□□□□□ -0.79
CLK3-201ENST00000345005 TRGV9Q99603 122 aa10.09□□□□□ -0.79
CLK3-201ENST00000345005 SLC25A2Q9BXI2 301 aa10.09□□□□□ -0.79
CLK3-201ENST00000345005 GFRA4Q9GZZ7 299 aa10.09□□□□□ -0.79
CLK3-201ENST00000345005 TNFRSF19Q9NS68 423 aa10.09□□□□□ -0.79
CLK3-201ENST00000345005 MRPL36Q9P0J6 103 aaKnown RBP10.09□□□□□ -0.79
CLK3-201ENST00000345005 ABCA12Q86UK0 2595 aa10.08□□□□□ -0.8
CLK3-201ENST00000345005 ABCA1O95477 2261 aa10.08□□□□□ -0.8
CLK3-201ENST00000345005 IGKV1D-37A0A075B6S9 117 aa10.08□□□□□ -0.8
CLK3-201ENST00000345005 IGHV7-81A0A0B4J1V7 117 aa10.08□□□□□ -0.8
CLK3-201ENST00000345005 PSMB11A5LHX3 300 aa10.08□□□□□ -0.8
CLK3-201ENST00000345005 A8MWL6 223 aa10.08□□□□□ -0.8
CLK3-201ENST00000345005 I3L2K1 104 aa10.08□□□□□ -0.8
CLK3-201ENST00000345005 CRXO43186 299 aaPredicted RBP10.08□□□□□ -0.8
CLK3-201ENST00000345005 FRMD6-AS1P0C7T7 363 aa10.08□□□□□ -0.8
CLK3-201ENST00000345005 GATA2P23769 480 aaPredicted RBP10.08□□□□□ -0.8
CLK3-201ENST00000345005 TFPI2P48307 235 aa10.08□□□□□ -0.8
CLK3-201ENST00000345005 PRSS57Q6UWY2 283 aa10.08□□□□□ -0.8
CLK3-201ENST00000345005 NUP35Q8NFH5 326 aa10.08□□□□□ -0.8
CLK3-201ENST00000345005 NUDT11Q96G61 164 aa10.08□□□□□ -0.8
CLK3-201ENST00000345005 TMEM70Q9BUB7 260 aa10.08□□□□□ -0.8
CLK3-201ENST00000345005 TEX15Q9BXT5 2789 aa10.08□□□□□ -0.8
CLK3-201ENST00000345005 Q5PR19 223 aa10.07□□□□□ -0.8
CLK3-201ENST00000345005 ZNF329Q86UD4 541 aa10.07□□□□□ -0.8
CLK3-201ENST00000345005 NHLRC2Q8NBF2 726 aa10.07□□□□□ -0.8
CLK3-201ENST00000345005 KLF12Q9Y4X4 402 aa10.07□□□□□ -0.8
CLK3-201ENST00000345005 CSMD1Q96PZ7 3565 aa10.07□□□□□ -0.8
CLK3-201ENST00000345005 RNF223E7ERA6 249 aa10.07□□□□□ -0.8
CLK3-201ENST00000345005 HBBP68871 147 aa10.07□□□□□ -0.8
CLK3-201ENST00000345005 SLC35B1P78383 322 aa10.07□□□□□ -0.8
CLK3-201ENST00000345005 SLAQ13239 276 aa10.07□□□□□ -0.8
CLK3-201ENST00000345005 OCIAD2Q56VL3 154 aa10.07□□□□□ -0.8
CLK3-201ENST00000345005 ASPHD1Q5U4P2 390 aa10.07□□□□□ -0.8
CLK3-201ENST00000345005 VPS25Q9BRG1 176 aa10.07□□□□□ -0.8
CLK3-201ENST00000345005 ZNF492Q9P255 531 aa10.07□□□□□ -0.8
CLK3-201ENST00000345005 RNF114Q9Y508 228 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms