RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 CLLU1Q5K131 121 aa10.35□□□□□ -0.75
TPM4-202ENST00000344824 SBSPONQ8IVN8 264 aa10.35□□□□□ -0.75
TPM4-202ENST00000344824 Q8N1Y9 231 aa10.35□□□□□ -0.75
TPM4-202ENST00000344824 MARC2Q969Z3 335 aa10.35□□□□□ -0.75
TPM4-202ENST00000344824 PAXXQ9BUH6 204 aa10.35□□□□□ -0.75
TPM4-202ENST00000344824 OR51M1Q9H341 326 aa10.35□□□□□ -0.75
TPM4-202ENST00000344824 U3KQK5 164 aa10.35□□□□□ -0.75
TPM4-202ENST00000344824 H3BTX0 84 aa10.34□□□□□ -0.75
TPM4-202ENST00000344824 BUB3O43684 328 aa10.34□□□□□ -0.75
TPM4-202ENST00000344824 NHLRC4P0CG21 123 aaPredicted RBP10.34□□□□□ -0.75
TPM4-202ENST00000344824 GCHFRP30047 84 aa10.34□□□□□ -0.75
TPM4-202ENST00000344824 UBE2L3P68036 154 aaKnown RBP10.34□□□□□ -0.75
TPM4-202ENST00000344824 ZNF503Q96F45 646 aa10.34□□□□□ -0.75
TPM4-202ENST00000344824 GRAMD2BQ96HH9 432 aa10.34□□□□□ -0.75
TPM4-202ENST00000344824 RHPN1-AS1Q9BWJ2 59 aa10.34□□□□□ -0.75
TPM4-202ENST00000344824 SMPXQ9UHP9 88 aa10.34□□□□□ -0.75
TPM4-202ENST00000344824 U3KQE9 123 aa10.34□□□□□ -0.75
TPM4-202ENST00000344824 STAB2Q8WWQ8 2551 aa10.34□□□□□ -0.75
TPM4-202ENST00000344824 A0A1W2PS18 150 aa10.33□□□□□ -0.76
TPM4-202ENST00000344824 ZNF785A8K8V0 405 aa10.33□□□□□ -0.76
TPM4-202ENST00000344824 CHEK1O14757 476 aa10.33□□□□□ -0.76
TPM4-202ENST00000344824 C16orf54Q6UWD8 224 aa10.33□□□□□ -0.76
TPM4-202ENST00000344824 PQLC2Q6ZP29 291 aa10.33□□□□□ -0.76
TPM4-202ENST00000344824 BPIFA4PQ86YQ2 179 aa10.33□□□□□ -0.76
TPM4-202ENST00000344824 DEFB125Q8N687 156 aa10.33□□□□□ -0.76
TPM4-202ENST00000344824 BLNKQ8WV28 456 aa10.33□□□□□ -0.76
TPM4-202ENST00000344824 ZMAT4Q9H898 229 aa10.33□□□□□ -0.76
TPM4-202ENST00000344824 TENM3Q9P273 2699 aa10.33□□□□□ -0.76
TPM4-202ENST00000344824 IGKV3-7A0A075B6H7 116 aa10.33□□□□□ -0.76
TPM4-202ENST00000344824 ATF4P18848 351 aaPredicted RBP10.33□□□□□ -0.76
TPM4-202ENST00000344824 UBE2G2P60604 165 aa10.33□□□□□ -0.76
TPM4-202ENST00000344824 RPL11P62913 178 aaKnown RBP10.33□□□□□ -0.76
TPM4-202ENST00000344824 TMEM231Q9H6L2 316 aa10.33□□□□□ -0.76
TPM4-202ENST00000344824 SRD5A3Q9H8P0 318 aa10.33□□□□□ -0.76
TPM4-202ENST00000344824 GNG13Q9P2W3 67 aa10.33□□□□□ -0.76
TPM4-202ENST00000344824 HUWE1Q7Z6Z7 4374 aaKnown RBP10.32□□□□□ -0.76
TPM4-202ENST00000344824 TRAV1-1A0A0B4J248 108 aa10.32□□□□□ -0.76
TPM4-202ENST00000344824 OR11H12B2RN74 326 aa10.32□□□□□ -0.76
TPM4-202ENST00000344824 RPL7P18124 248 aaKnown RBP10.32□□□□□ -0.76
TPM4-202ENST00000344824 BMI1P35226 326 aa10.32□□□□□ -0.76
TPM4-202ENST00000344824 GALR1P47211 349 aa10.32□□□□□ -0.76
TPM4-202ENST00000344824 C1orf194Q5T5A4 169 aa10.32□□□□□ -0.76
TPM4-202ENST00000344824 SIGLEC15Q6ZMC9 328 aa10.32□□□□□ -0.76
TPM4-202ENST00000344824 STXBP6Q8NFX7 210 aa10.32□□□□□ -0.76
TPM4-202ENST00000344824 GLMPQ8WWB7 406 aa10.32□□□□□ -0.76
TPM4-202ENST00000344824 FXYD5Q96DB9 178 aa10.32□□□□□ -0.76
TPM4-202ENST00000344824 RCHY1Q96PM5 261 aa10.32□□□□□ -0.76
TPM4-202ENST00000344824 RNF24Q9Y225 148 aa10.32□□□□□ -0.76
TPM4-202ENST00000344824 H3BQ15 152 aa10.31□□□□□ -0.76
TPM4-202ENST00000344824 MRPS12O15235 138 aaKnown RBP10.31□□□□□ -0.76
TPM4-202ENST00000344824 HAGHQ16775 308 aa10.31□□□□□ -0.76
TPM4-202ENST00000344824 TCF24Q7RTU0 167 aa10.31□□□□□ -0.76
TPM4-202ENST00000344824 LYPD6BQ8NI32 183 aa10.31□□□□□ -0.76
TPM4-202ENST00000344824 C17orf77Q96MU5 243 aa10.31□□□□□ -0.76
TPM4-202ENST00000344824 TMEM167BQ9NRX6 74 aa10.31□□□□□ -0.76
TPM4-202ENST00000344824 C19orf73Q9NVV2 129 aa10.31□□□□□ -0.76
TPM4-202ENST00000344824 ZNF586Q9NXT0 402 aa10.31□□□□□ -0.76
TPM4-202ENST00000344824 TMEM14CQ9P0S9 112 aa10.31□□□□□ -0.76
TPM4-202ENST00000344824 TRAV25A0A0B4J276 109 aa10.3□□□□□ -0.76
TPM4-202ENST00000344824 HIST1H1EP10412 219 aaKnown RBP10.3□□□□□ -0.76
TPM4-202ENST00000344824 TFPI2P48307 235 aa10.3□□□□□ -0.76
TPM4-202ENST00000344824 GBGT1Q8N5D6 347 aa10.3□□□□□ -0.76
TPM4-202ENST00000344824 WWC2-AS2Q96NR7 200 aa10.3□□□□□ -0.76
TPM4-202ENST00000344824 GPR82Q96P67 336 aa10.3□□□□□ -0.76
TPM4-202ENST00000344824 LCE2BO14633 110 aa10.29□□□□□ -0.76
TPM4-202ENST00000344824 PAGE4O60829 102 aa10.29□□□□□ -0.76
TPM4-202ENST00000344824 IFNA1P01562 189 aa10.29□□□□□ -0.76
TPM4-202ENST00000344824 NBEAP1P0C6P0 100 aa10.29□□□□□ -0.76
TPM4-202ENST00000344824 IGLC2P0DOY2 106 aa10.29□□□□□ -0.76
TPM4-202ENST00000344824 PSMB3P49720 205 aa10.29□□□□□ -0.76
TPM4-202ENST00000344824 TOR2AQ5JU69 321 aa10.29□□□□□ -0.76
TPM4-202ENST00000344824 CST9LP1Q5W188 147 aa10.29□□□□□ -0.76
TPM4-202ENST00000344824 COMMD7Q86VX2 200 aa10.29□□□□□ -0.76
TPM4-202ENST00000344824 HELTA6NFD8 242 aa10.28□□□□□ -0.76
TPM4-202ENST00000344824 A8MZ25 164 aa10.28□□□□□ -0.76
TPM4-202ENST00000344824 SLC17A3O00476 420 aa10.28□□□□□ -0.76
TPM4-202ENST00000344824 TSPAN4O14817 238 aa10.28□□□□□ -0.76
TPM4-202ENST00000344824 RANP62826 216 aaKnown RBP10.28□□□□□ -0.76
TPM4-202ENST00000344824 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.28□□□□□ -0.76
TPM4-202ENST00000344824 WFDC3Q8IUB2 231 aa10.28□□□□□ -0.76
TPM4-202ENST00000344824 SPAG8Q99932 426 aaPredicted RBP10.28□□□□□ -0.76
TPM4-202ENST00000344824 RARRES2Q99969 163 aa10.28□□□□□ -0.76
TPM4-202ENST00000344824 EIF5A2Q9GZV4 153 aaKnown RBP10.28□□□□□ -0.76
TPM4-202ENST00000344824 MANBALQ9NQG1 85 aa10.28□□□□□ -0.76
TPM4-202ENST00000344824 YTHDF2Q9Y5A9 579 aaKnown RBP10.28□□□□□ -0.76
TPM4-202ENST00000344824 TRBV19A0A075B6N1 114 aa10.27□□□□□ -0.77
TPM4-202ENST00000344824 OR4C46A6NHA9 309 aa10.27□□□□□ -0.77
TPM4-202ENST00000344824 PRB4P10163 310 aaPredicted RBP10.27□□□□□ -0.77
TPM4-202ENST00000344824 PPT1P50897 306 aa10.27□□□□□ -0.77
TPM4-202ENST00000344824 GUK1Q16774 197 aa10.27□□□□□ -0.77
TPM4-202ENST00000344824 IGFL4Q6B9Z1 124 aa10.27□□□□□ -0.77
TPM4-202ENST00000344824 RXFP4Q8TDU9 374 aa10.27□□□□□ -0.77
TPM4-202ENST00000344824 SPATA25Q9BR10 227 aa10.27□□□□□ -0.77
TPM4-202ENST00000344824 RETNQ9HD89 108 aa10.27□□□□□ -0.77
TPM4-202ENST00000344824 NBEAL2Q6ZNJ1 2754 aa10.27□□□□□ -0.77
TPM4-202ENST00000344824 A0A087X0K7 114 aa10.26□□□□□ -0.77
TPM4-202ENST00000344824 LOC102723971A0A1B0GUV8 181 aa10.26□□□□□ -0.77
TPM4-202ENST00000344824 LINC00862A6NCI5 91 aa10.26□□□□□ -0.77
TPM4-202ENST00000344824 RBFOX3A6NFN3 312 aa10.26□□□□□ -0.77
TPM4-202ENST00000344824 FAM74A7A6NL05 159 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms