RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 IGKCP01834 107 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 TCRAP04437 139 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 IL4P05112 153 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 PYYP10082 97 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 CCL3P10147 92 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 CD24P25063 80 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 IFI27P40305 119 aaPredicted RBP6.52□□□□□ -1.37
ATG4A-201ENST00000343524 B3GALT5-AS1P59052 145 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 GNG5P63218 68 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 Q6Q795 121 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 TEN1Q86WV5 123 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 PPP1R35Q8TAP8 253 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 ITLN1Q8WWA0 313 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 DDB2Q92466 427 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 RITA1Q96K30 269 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 FAM234AQ9H0X4 552 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 ZMAT4Q9H898 229 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 RP1P56715 2156 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 FBN3Q75N90 2809 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 IGHV3-43A0A0B4J1X8 118 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 TRAV3A0A0B4J244 114 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 CENPVL3A0A0U1RRI6 287 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 A0A1W2PQM1 296 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 ZNF688P0C7X2 276 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 IGHV3-43DP0DP04 118 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 LY6DQ14210 128 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 MOB3BQ86TA1 216 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 MOGAT3Q86VF5 341 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 RBMXL3Q8N7X1 1067 aaKnown RBP6.52□□□□□ -1.37
ATG4A-201ENST00000343524 PLPPR2Q96GM1 343 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 HINT2Q9BX68 163 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 MAP1LC3AQ9H492 121 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 YAE1D1Q9NRH1 226 aa6.52□□□□□ -1.37
ATG4A-201ENST00000343524 FABP5P3A8MUU1 101 aa6.51□□□□□ -1.37
ATG4A-201ENST00000343524 INS-IGF2F8WCM5 200 aa6.51□□□□□ -1.37
ATG4A-201ENST00000343524 C15orf65H3BRN8 121 aa6.51□□□□□ -1.37
ATG4A-201ENST00000343524 DPM2O94777 84 aa6.51□□□□□ -1.37
ATG4A-201ENST00000343524 ERHP84090 104 aaKnown RBP6.51□□□□□ -1.37
ATG4A-201ENST00000343524 WDR86Q86TI4 376 aa6.51□□□□□ -1.37
ATG4A-201ENST00000343524 VKORC1L1Q8N0U8 176 aa6.51□□□□□ -1.37
ATG4A-201ENST00000343524 OR13A1Q8NGR1 328 aa6.51□□□□□ -1.37
ATG4A-201ENST00000343524 C18orf15Q96N68 181 aa6.51□□□□□ -1.37
ATG4A-201ENST00000343524 PSMG3-AS1Q96PY0 264 aa6.51□□□□□ -1.37
ATG4A-201ENST00000343524 HIST1H4GQ99525 98 aa6.51□□□□□ -1.37
ATG4A-201ENST00000343524 KLF13Q9Y2Y9 288 aaPredicted RBP6.51□□□□□ -1.37
ATG4A-201ENST00000343524 MED12LQ86YW9 2145 aa6.51□□□□□ -1.37
ATG4A-201ENST00000343524 TRBV20-1A0A075B6N2 111 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 A0A096LPE4 126 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 A0A1W2PPZ6 126 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 NCBP2LA6PVI3 153 aaKnown RBP6.5□□□□□ -1.37
ATG4A-201ENST00000343524 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.5□□□□□ -1.37
ATG4A-201ENST00000343524 M0QXV9 152 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 RHODO00212 210 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 UPK2O00526 184 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 SCRG1O75711 98 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 SNCGO76070 127 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 ARMS2P0C7Q2 107 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 RNASE2P10153 161 aaKnown RBP6.5□□□□□ -1.37
ATG4A-201ENST00000343524 GATA3P23771 443 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 GATA4P43694 442 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 INSL3P51460 131 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 C3AR1Q16581 482 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 TBC1D28Q2M2D7 210 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 DEFB133Q30KQ1 61 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 SMIM20Q8N5G0 67 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 THAP8Q8NA92 274 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 TMEM158Q8WZ71 300 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 KRTAP9-2Q9BYQ4 174 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 OTORQ9NRC9 128 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 HIF1ANQ9NWT6 349 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 ABCA7Q8IZY2 2146 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 LINC01546A6NGU7 62 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 D6R8Y8 96 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 FCN3O75636 299 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 MEOX1P50221 254 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 GAGE2BQ13066 116 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 ODF1Q14990 250 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 TMEM30BQ3MIR4 351 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 GAGE2EQ4V326 116 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 ASPHD1Q5U4P2 390 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 FAM104BQ5XKR9 115 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 LINC00322Q6ZN03 302 aaPredicted RBP6.5□□□□□ -1.37
ATG4A-201ENST00000343524 LINC00305Q7Z4B0 112 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 CIARTQ8N365 385 aaPredicted RBP6.5□□□□□ -1.37
ATG4A-201ENST00000343524 CITED1Q99966 193 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 SPXQ9BT56 116 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 PRRG4Q9BZD6 226 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 TMEM126AQ9H061 195 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 PROK2Q9HC23 129 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 GAGE2DQ9UEU5 116 aa6.5□□□□□ -1.37
ATG4A-201ENST00000343524 FER1L5A0AVI2 2057 aa6.49□□□□□ -1.37
ATG4A-201ENST00000343524 PRSS29PA6NIE9 313 aa6.49□□□□□ -1.37
ATG4A-201ENST00000343524 DEFB108AA8MXU0 73 aa6.49□□□□□ -1.37
ATG4A-201ENST00000343524 IQCF6A8MYZ5 107 aa6.49□□□□□ -1.37
ATG4A-201ENST00000343524 KLK10O43240 276 aa6.49□□□□□ -1.37
ATG4A-201ENST00000343524 HOXA3O43365 443 aaPredicted RBP6.49□□□□□ -1.37
ATG4A-201ENST00000343524 MT-CO3P00414 261 aa6.49□□□□□ -1.37
ATG4A-201ENST00000343524 IFITM1P13164 125 aa6.49□□□□□ -1.37
ATG4A-201ENST00000343524 NDUFV3P56181 108 aaKnown RBP6.49□□□□□ -1.37
ATG4A-201ENST00000343524 PAX8Q06710 450 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms