RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 C12orf57Q99622 126 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 OTOGQ6ZRI0 2925 aa5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 TRAV30A0A087WSZ9 112 aa5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 ZNF785A8K8V0 405 aa5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 AP4M1O00189 453 aa5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 IGLV2-11P01706 119 aa5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 TRGV3P03979 118 aa5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 HIST1H1BP16401 226 aaKnown RBP5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 CNN1P51911 297 aaKnown RBP5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 FOXL1Q12952 345 aa5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 IBA57Q5T440 356 aaKnown RBP5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 HIST2H2BDQ6DRA6 164 aa5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 SIGLEC15Q6ZMC9 328 aa5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 ZNF48Q96MX3 618 aaPredicted RBP5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 SRD5A3Q9H8P0 318 aa5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 ZNF705FA8MVS1 300 aaPredicted RBP5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 CD99P14209 185 aa5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 CBLN1P23435 193 aa5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 PPIFP30405 207 aaKnown RBP5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 SRP14P37108 136 aaKnown RBP5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 S100A12P80511 92 aa5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 TMEM68Q96MH6 324 aa5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 PSMG3-AS1Q96PY0 264 aa5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 ZFAND3Q9H8U3 227 aa5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 TMEM14CQ9P0S9 112 aa5.72□□□□□ -1.49
SRFBP1-201ENST00000339397 UBE2CO00762 179 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 IGHG2P01859 326 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 TPPP2P59282 170 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 LOXL1Q08397 574 aaPredicted RBP5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 TMEM183BQ1AE95 376 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 UNQ9165/PRO28630Q6UXU0 137 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 PRNTQ86SH4 94 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 C5orf17Q8NAS9 161 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 NUDT10Q8NFP7 164 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 VN1R17PQ8TDU5 208 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 NUDT11Q96G61 164 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 ATG101Q9BSB4 218 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 IL36BQ9NZH7 164 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 KLF12Q9Y4X4 402 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 LY96Q9Y6Y9 160 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 ZNF705GA8MUZ8 300 aaPredicted RBP5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 IGHG4P01861 327 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 UBE2G1P62253 170 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 OR4F17Q8NGA8 305 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 MLST8Q9BVC4 326 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 GPR61Q9BZJ8 451 aa5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 BEX4Q9NWD9 120 aaPredicted RBP5.71□□□□□ -1.5
SRFBP1-201ENST00000339397 ANK3Q12955 4377 aaKnown RBP5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 TGOLN2O43493 480 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 IGF1P05019 195 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 FABP1P07148 127 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 EDN2P20800 178 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 IER3P46695 156 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 MEOX2P50222 304 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 TAS2R60P59551 318 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 ATP5G2Q06055 141 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 KCNIP4Q6PIL6 250 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 OTORQ9NRC9 128 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 RABAC1Q9UI14 185 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 CYSRT1A8MQ03 144 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 PPP1R2P9O14990 202 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 BUB3O43684 328 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 GZMBP10144 247 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 HOXA5P20719 270 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 GATA3P23771 443 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 MRPL54Q6P161 138 aaKnown RBP5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 RNF182Q8N6D2 247 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 GPR82Q96P67 336 aa5.7□□□□□ -1.5
SRFBP1-201ENST00000339397 IGKV2-40A0A087WW87 121 aaPredicted RBP5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 J3QKU1 62 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 LTAP01374 205 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 IGKV2D-40P01614 121 aaPredicted RBP5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 RPEL1Q2QD12 228 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 KLK9Q2XQG4 91 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 ACTL10Q5JWF8 245 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 TCF24Q7RTU0 167 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 CMTM2Q8TAZ6 248 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 TXN2Q99757 166 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 OSTCQ9NRP0 149 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 KLK9Q9UKQ9 250 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 TRAPPC1Q9Y5R8 145 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 GRIFINA4D1Z8 144 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 PRAC2D3DTV9 90 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 NUPR1O60356 82 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 TYMSP04818 313 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 CRIP1P50238 77 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 RPL19P84098 196 aaKnown RBP5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 KIAA1644Q3SXP7 199 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 CDPF1Q6NVV7 123 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 EEF1AKMT3Q96AZ1 226 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 C8orf49Q96NF6 230 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 TRBV7-1A0A0A6YYK4 115 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 DIRC3C9JPN6 131 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 BMPR1BO00238 502 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 HOXA3O43365 443 aaPredicted RBP5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 Q8TAT8 98 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 ZC2HC1AQ96GY0 325 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 VGLL1Q99990 258 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 WNK1Q9H4A3 2382 aa5.69□□□□□ -1.5
SRFBP1-201ENST00000339397 RAB9AP51151 201 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms