RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 DSCR9P59020 149 aa12.6□□□□□ -0.39
SCNN1A-202ENST00000338748 NOL4LQ96MY1 436 aaPredicted RBP12.6□□□□□ -0.39
SCNN1A-202ENST00000338748 GNB4Q9HAV0 340 aa12.6□□□□□ -0.39
SCNN1A-202ENST00000338748 RABAC1Q9UI14 185 aa12.6□□□□□ -0.39
SCNN1A-202ENST00000338748 SMAD5-AS1Q9Y6J3 95 aa12.6□□□□□ -0.39
SCNN1A-202ENST00000338748 TEX15Q9BXT5 2789 aa12.59□□□□□ -0.39
SCNN1A-202ENST00000338748 SLC25A16P16260 332 aa12.59□□□□□ -0.39
SCNN1A-202ENST00000338748 BLCAPP62952 87 aa12.59□□□□□ -0.39
SCNN1A-202ENST00000338748 CLPSL1A2RUU4 121 aa12.58□□□□□ -0.39
SCNN1A-202ENST00000338748 IGFL4Q6B9Z1 124 aa12.58□□□□□ -0.39
SCNN1A-202ENST00000338748 TMEM136Q6ZRR5 245 aa12.58□□□□□ -0.39
SCNN1A-202ENST00000338748 TMEM256Q8N2U0 113 aa12.58□□□□□ -0.39
SCNN1A-202ENST00000338748 NUP35Q8NFH5 326 aa12.58□□□□□ -0.39
SCNN1A-202ENST00000338748 SMIM12Q96EX1 92 aa12.58□□□□□ -0.39
SCNN1A-202ENST00000338748 PACRGQ96M98 296 aaPredicted RBP12.58□□□□□ -0.39
SCNN1A-202ENST00000338748 NEU1Q99519 415 aa12.58□□□□□ -0.39
SCNN1A-202ENST00000338748 TP53TG3Q9ULZ0 132 aa12.58□□□□□ -0.39
SCNN1A-202ENST00000338748 C19orf71A6NCJ1 209 aa12.58□□□□□ -0.4
SCNN1A-202ENST00000338748 NUPR1O60356 82 aa12.58□□□□□ -0.4
SCNN1A-202ENST00000338748 DOPEY2Q9Y3R5 2298 aa12.58□□□□□ -0.4
SCNN1A-202ENST00000338748 TRAV20A0A0B4J274 112 aa12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 IGHV3-66A0A0C4DH42 116 aa12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 CRIP2P52943 208 aaPredicted RBP12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 GRAMD2BQ96HH9 432 aa12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 PRSS22Q9GZN4 317 aa12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 RNF24Q9Y225 148 aa12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 IGHV3OR16-13A0A075B7E8 117 aa12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 IGHV3-74A0A0B4J1X5 117 aa12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 IZUMO1RA6ND01 250 aa12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 HIGD1CA8MV81 97 aa12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 DIRC3C9JPN6 131 aa12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 F2Z2F3 143 aa12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 BMPR1BO00238 502 aa12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 LINC00310P59036 64 aa12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 PDE6HQ13956 83 aa12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 LYPD1Q8N2G4 141 aa12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 EEF1AKMT3Q96AZ1 226 aa12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 GNB1LQ9BYB4 327 aa12.57□□□□□ -0.4
SCNN1A-202ENST00000338748 SCGB2A1O75556 95 aa12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 APOHP02749 345 aaPredicted RBP12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 RPL7P18124 248 aaKnown RBP12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 HLA-DMBP28068 263 aa12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 PRR31Q5SQ13 230 aa12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 TCF24Q7RTU0 167 aa12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 LINC01356Q8N9X3 169 aa12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 TSKUQ8WUA8 353 aa12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 ZC2HC1AQ96GY0 325 aa12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 NAT8BQ9UHF3 227 aa12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 CR1P17927 2039 aa12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 IGHV3-49A0A0A0MS15 119 aa12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 RNF223E7ERA6 249 aa12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 ZNF207O43670 478 aaKnown RBP12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 IGF1P05019 195 aa12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 KIAA1644Q3SXP7 199 aa12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 GDF5OSQ5U4N7 250 aa12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 TMEM75Q8N9X5 138 aa12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 GTSF1Q8WW33 167 aa12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 RPP21Q9H633 154 aaKnown RBP12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 TLN2Q9Y4G6 2542 aa12.56□□□□□ -0.4
SCNN1A-202ENST00000338748 TRBV12-3P01733 135 aa12.55□□□□□ -0.4
SCNN1A-202ENST00000338748 IGHG2P01859 326 aa12.55□□□□□ -0.4
SCNN1A-202ENST00000338748 IGHG4P01861 327 aa12.55□□□□□ -0.4
SCNN1A-202ENST00000338748 TRGV3P03979 118 aa12.55□□□□□ -0.4
SCNN1A-202ENST00000338748 RAB4BP61018 213 aa12.55□□□□□ -0.4
SCNN1A-202ENST00000338748 PSG3Q16557 428 aa12.55□□□□□ -0.4
SCNN1A-202ENST00000338748 S100A7AQ86SG5 101 aa12.55□□□□□ -0.4
SCNN1A-202ENST00000338748 ZNF492Q9P255 531 aa12.55□□□□□ -0.4
SCNN1A-202ENST00000338748 IGKV2-40A0A087WW87 121 aaPredicted RBP12.54□□□□□ -0.4
SCNN1A-202ENST00000338748 TRBV7-1A0A0A6YYK4 115 aa12.54□□□□□ -0.4
SCNN1A-202ENST00000338748 BUB3O43684 328 aa12.54□□□□□ -0.4
SCNN1A-202ENST00000338748 IGKV2D-40P01614 121 aaPredicted RBP12.54□□□□□ -0.4
SCNN1A-202ENST00000338748 P01737 135 aa12.54□□□□□ -0.4
SCNN1A-202ENST00000338748 PPIFP30405 207 aaKnown RBP12.54□□□□□ -0.4
SCNN1A-202ENST00000338748 ATP5G2Q06055 141 aa12.54□□□□□ -0.4
SCNN1A-202ENST00000338748 LCNL1Q6ZST4 164 aa12.54□□□□□ -0.4
SCNN1A-202ENST00000338748 PSG8Q9UQ74 426 aa12.54□□□□□ -0.4
SCNN1A-202ENST00000338748 TGFAP01135 160 aa12.54□□□□□ -0.4
SCNN1A-202ENST00000338748 GZMBP10144 247 aa12.54□□□□□ -0.4
SCNN1A-202ENST00000338748 GATA3P23771 443 aa12.54□□□□□ -0.4
SCNN1A-202ENST00000338748 SLAQ13239 276 aa12.54□□□□□ -0.4
SCNN1A-202ENST00000338748 GBGT1Q8N5D6 347 aa12.54□□□□□ -0.4
SCNN1A-202ENST00000338748 KLK15Q9H2R5 256 aa12.54□□□□□ -0.4
SCNN1A-202ENST00000338748 AAMDCQ9H7C9 122 aa12.54□□□□□ -0.4
SCNN1A-202ENST00000338748 IGHV4-59P01825 116 aa12.53□□□□□ -0.4
SCNN1A-202ENST00000338748 DEFB112Q30KQ8 113 aa12.53□□□□□ -0.4
SCNN1A-202ENST00000338748 TMEM95Q3KNT9 176 aa12.53□□□□□ -0.4
SCNN1A-202ENST00000338748 TRBV6-1A0A0K0K1D8 114 aa12.53□□□□□ -0.4
SCNN1A-202ENST00000338748 NPIPB6E9PJ23 425 aa12.53□□□□□ -0.4
SCNN1A-202ENST00000338748 CRISP2P16562 243 aa12.53□□□□□ -0.4
SCNN1A-202ENST00000338748 TPPP2P59282 170 aa12.53□□□□□ -0.4
SCNN1A-202ENST00000338748 RPL19P84098 196 aaKnown RBP12.53□□□□□ -0.4
SCNN1A-202ENST00000338748 C8orf49Q96NF6 230 aa12.53□□□□□ -0.4
SCNN1A-202ENST00000338748 KMT2BQ9UMN6 2715 aaPredicted RBP12.52□□□□□ -0.41
SCNN1A-202ENST00000338748 FAM223BA6NKX1 122 aa12.52□□□□□ -0.41
SCNN1A-202ENST00000338748 ZNF705FA8MVS1 300 aaPredicted RBP12.52□□□□□ -0.41
SCNN1A-202ENST00000338748 CRIP1P50238 77 aa12.52□□□□□ -0.41
SCNN1A-202ENST00000338748 WDR73Q6P4I2 378 aa12.52□□□□□ -0.41
SCNN1A-202ENST00000338748 FAM223AQ8IWN6 122 aa12.52□□□□□ -0.41
SCNN1A-202ENST00000338748 ITPR3Q14573 2671 aa12.52□□□□□ -0.41
SCNN1A-202ENST00000338748 CCDC168Q8NDH2 2452 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms