RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 HTN3P15516 51 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 LYZL1Q6UWQ5 148 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 SCRT1Q9BWW7 348 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 LSM4Q9Y4Z0 139 aaKnown RBP5.12□□□□□ -1.59
CSMD1-201ENST00000335551 LOC101059948A0A1B0GTJ6 334 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 A0A1W2PPI3 338 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 LINC01565O15544 149 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 LYPD1Q8N2G4 141 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 SIVA1O15304 175 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 CRLF1O75462 422 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 LYL1P12980 280 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 RPL36AP83881 106 aaKnown RBP5.12□□□□□ -1.59
CSMD1-201ENST00000335551 C6orf226Q5I0X4 101 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 DEFB121Q5J5C9 76 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 RPL36ALQ969Q0 106 aaKnown RBP5.12□□□□□ -1.59
CSMD1-201ENST00000335551 CARD19Q96LW7 228 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 R3HDMLQ9H3Y0 253 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 NUP210LQ5VU65 1888 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 IGKV1-8A0A0C4DH67 115 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 SRXN1Q9BYN0 137 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 SS18Q15532 418 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 SPATA31B1PQ5VZV4 182 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 ID3Q02535 119 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 Q6ZT83 130 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 EFEMP2O95967 443 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 HAMPP81172 84 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 KLRD1Q13241 179 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 ZNF319Q9P2F9 582 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 A0A1W2PR77 199 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 LILRA1O75019 489 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 IGHG2P01859 326 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 PEBP1P30086 187 aaKnown RBP5.11□□□□□ -1.59
CSMD1-201ENST00000335551 VDAC2P45880 294 aaPredicted RBP5.11□□□□□ -1.59
CSMD1-201ENST00000335551 NBL1P41271 181 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 TREML4Q6UXN2 200 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 C3orf56Q8N813 242 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 S4R3C0 116 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 PLXNA4Q9HCM2 1894 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 PSCAO43653 123 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 C1orf159Q96HA4 380 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 ATG2AQ2TAZ0 1938 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 MORN5Q5VZ52 161 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 MP68P56378 58 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 LAIR2Q6ISS4 152 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 Q6ZS52 159 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 GLMPQ8WWB7 406 aa5.11□□□□□ -1.59
CSMD1-201ENST00000335551 CD55P08174 381 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 FGF6P10767 208 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 SPSB3Q6PJ21 355 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 LCNL1Q6ZST4 164 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 C15orf53Q8NAA6 179 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 WDR83OSQ9Y284 106 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 H3BQ85 93 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 ZNF138P52744 262 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 STPG4Q8N801 248 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 C5orf67F2Z3F1 127 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 MUC6Q6W4X9 2439 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 IGLC2P0DOY2 106 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 IGLC3P0DOY3 106 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 PAX8Q06710 450 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 REPIN1Q9BWE0 567 aaKnown RBP5.1□□□□□ -1.59
CSMD1-201ENST00000335551 THSD7AQ9UPZ6 1657 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 F6UB75 175 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 SH2D1AO60880 128 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 BVES-AS1Q5T3Y7 98 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 C1QL2Q7Z5L3 287 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 NKAPP1Q8N9T2 125 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 TMEM75Q8N9X5 138 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 SLC25A28Q96A46 364 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 COL11A2P13942 1736 aaPredicted RBP5.1□□□□□ -1.59
CSMD1-201ENST00000335551 H0YIZ8 118 aa5.1□□□□□ -1.59
CSMD1-201ENST00000335551 CHKB-CPT1BH3BT56 60 aa5.09□□□□□ -1.59
CSMD1-201ENST00000335551 CRYBA2P53672 197 aa5.09□□□□□ -1.59
CSMD1-201ENST00000335551 TMEM52Q8NDY8 209 aa5.09□□□□□ -1.59
CSMD1-201ENST00000335551 SRRM4A7MD48 611 aaKnown RBP5.09□□□□□ -1.59
CSMD1-201ENST00000335551 SPXQ9BT56 116 aa5.09□□□□□ -1.59
CSMD1-201ENST00000335551 ZNF876PQ49A33 203 aa5.09□□□□□ -1.59
CSMD1-201ENST00000335551 Q86TA4 180 aa5.09□□□□□ -1.59
CSMD1-201ENST00000335551 RCHY1Q96PM5 261 aa5.09□□□□□ -1.59
CSMD1-201ENST00000335551 IGHV2-26A0A0B4J1V2 119 aa5.09□□□□□ -1.59
CSMD1-201ENST00000335551 ATP5G1P05496 136 aa5.09□□□□□ -1.59
CSMD1-201ENST00000335551 C14orf178Q8N769 122 aaPredicted RBP5.09□□□□□ -1.59
CSMD1-201ENST00000335551 TRBV7-1A0A0A6YYK4 115 aa5.09□□□□□ -1.59
CSMD1-201ENST00000335551 LILRA6Q6PI73 481 aa5.09□□□□□ -1.59
CSMD1-201ENST00000335551 EXOC3-AS1Q8N2X6 119 aa5.09□□□□□ -1.59
CSMD1-201ENST00000335551 C18orf32Q8TCD1 76 aa5.09□□□□□ -1.59
CSMD1-201ENST00000335551 LINC00477Q96M19 166 aa5.09□□□□□ -1.59
CSMD1-201ENST00000335551 IGKV2-40A0A087WW87 121 aaPredicted RBP5.09□□□□□ -1.59
CSMD1-201ENST00000335551 IGKV2D-40P01614 121 aaPredicted RBP5.09□□□□□ -1.59
CSMD1-201ENST00000335551 TRPT1Q86TN4 253 aaKnown RBP5.09□□□□□ -1.59
CSMD1-201ENST00000335551 CRYBA4P53673 196 aa5.09□□□□□ -1.6
CSMD1-201ENST00000335551 CFPP27918 469 aa5.09□□□□□ -1.6
CSMD1-201ENST00000335551 SRSF2Q01130 221 aaKnown RBP5.09□□□□□ -1.6
CSMD1-201ENST00000335551 C15orf32Q32M92 178 aa5.09□□□□□ -1.6
CSMD1-201ENST00000335551 MORN2Q502X0 79 aa5.09□□□□□ -1.6
CSMD1-201ENST00000335551 ZNF474Q6S9Z5 364 aaPredicted RBP5.09□□□□□ -1.6
CSMD1-201ENST00000335551 TMEM133Q9H2Q1 129 aa5.09□□□□□ -1.6
CSMD1-201ENST00000335551 ZNF492Q9P255 531 aa5.09□□□□□ -1.6
CSMD1-201ENST00000335551 IGHV3OR16-8A0A075B7F1 116 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 APOBEC3AP31941 199 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms