RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 SMKR1H3BMG3 65 aa10.43□□□□□ -0.74
VSTM4-202ENST00000332853 HTN3P15516 51 aa10.43□□□□□ -0.74
VSTM4-202ENST00000332853 CFHR2P36980 270 aa10.43□□□□□ -0.74
VSTM4-202ENST00000332853 IL15RAQ13261 267 aa10.43□□□□□ -0.74
VSTM4-202ENST00000332853 PIP4P2Q8N4L2 257 aa10.43□□□□□ -0.74
VSTM4-202ENST00000332853 C8orf49Q96NF6 230 aa10.43□□□□□ -0.74
VSTM4-202ENST00000332853 SLX1AQ9BQ83 275 aa10.43□□□□□ -0.74
VSTM4-202ENST00000332853 PPP1R17O96001 155 aa10.43□□□□□ -0.74
VSTM4-202ENST00000332853 MSMBP08118 114 aa10.43□□□□□ -0.74
VSTM4-202ENST00000332853 PET117Q6UWS5 81 aa10.43□□□□□ -0.74
VSTM4-202ENST00000332853 ALPK3Q96L96 1907 aa10.43□□□□□ -0.74
VSTM4-202ENST00000332853 MED13Q9UHV7 2174 aa10.43□□□□□ -0.74
VSTM4-202ENST00000332853 C21orf62-AS1Q17RA5 79 aa10.42□□□□□ -0.74
VSTM4-202ENST00000332853 SEM1Q6ZVN7 128 aa10.42□□□□□ -0.74
VSTM4-202ENST00000332853 Q86TA4 180 aa10.42□□□□□ -0.74
VSTM4-202ENST00000332853 CEP192Q8TEP8 1941 aa10.42□□□□□ -0.74
VSTM4-202ENST00000332853 OVOL3O00110 214 aa10.42□□□□□ -0.74
VSTM4-202ENST00000332853 SMIM13P0DJ93 91 aa10.42□□□□□ -0.74
VSTM4-202ENST00000332853 F2Z2F3 143 aa10.42□□□□□ -0.74
VSTM4-202ENST00000332853 DUSP14O95147 198 aaKnown RBP10.42□□□□□ -0.74
VSTM4-202ENST00000332853 SRSF1Q07955 248 aaKnown RBP eCLIP10.42□□□□□ -0.74
VSTM4-202ENST00000332853 NCOR1P1Q9H4R4 102 aa10.42□□□□□ -0.74
VSTM4-202ENST00000332853 FREM1Q5H8C1 2179 aa10.42□□□□□ -0.74
VSTM4-202ENST00000332853 SAMD13Q5VXD3 122 aa10.42□□□□□ -0.74
VSTM4-202ENST00000332853 MCRIP2Q9BUT9 160 aaKnown RBP10.42□□□□□ -0.74
VSTM4-202ENST00000332853 RHPN1-AS1Q9BWJ2 59 aa10.42□□□□□ -0.74
VSTM4-202ENST00000332853 ZNF114Q8NC26 417 aa10.41□□□□□ -0.74
VSTM4-202ENST00000332853 FAM223BA6NKX1 122 aa10.41□□□□□ -0.74
VSTM4-202ENST00000332853 FAM223AQ8IWN6 122 aa10.41□□□□□ -0.74
VSTM4-202ENST00000332853 CHCHD1Q96BP2 118 aaKnown RBP10.41□□□□□ -0.74
VSTM4-202ENST00000332853 LY96Q9Y6Y9 160 aa10.41□□□□□ -0.74
VSTM4-202ENST00000332853 NUP210LQ5VU65 1888 aa10.41□□□□□ -0.74
VSTM4-202ENST00000332853 IGHV1-69DA0A0B4J2H0 117 aa10.41□□□□□ -0.74
VSTM4-202ENST00000332853 C22orf46C9J442 243 aa10.41□□□□□ -0.74
VSTM4-202ENST00000332853 IGHV1-69P01742 117 aa10.41□□□□□ -0.74
VSTM4-202ENST00000332853 TMEM249Q2WGJ8 235 aa10.41□□□□□ -0.74
VSTM4-202ENST00000332853 LCNL1Q6ZST4 164 aa10.41□□□□□ -0.74
VSTM4-202ENST00000332853 JMJD8Q96S16 334 aa10.41□□□□□ -0.74
VSTM4-202ENST00000332853 KMT2EQ8IZD2 1858 aa10.41□□□□□ -0.74
VSTM4-202ENST00000332853 SAP30O75446 220 aa10.41□□□□□ -0.74
VSTM4-202ENST00000332853 GGTLC3B5MD39 225 aa10.41□□□□□ -0.74
VSTM4-202ENST00000332853 LHBP01229 141 aa10.4□□□□□ -0.74
VSTM4-202ENST00000332853 Q6ZSR3 168 aa10.4□□□□□ -0.74
VSTM4-202ENST00000332853 LINC00311Q8N616 119 aa10.4□□□□□ -0.74
VSTM4-202ENST00000332853 EML6Q6ZMW3 1958 aa10.4□□□□□ -0.74
VSTM4-202ENST00000332853 PLP1P60201 277 aa10.4□□□□□ -0.74
VSTM4-202ENST00000332853 TMEM101Q96IK0 257 aa10.4□□□□□ -0.74
VSTM4-202ENST00000332853 TRAV9-2A0A087WT02 112 aa10.4□□□□□ -0.74
VSTM4-202ENST00000332853 SYNJ2BPP57105 145 aa10.4□□□□□ -0.74
VSTM4-202ENST00000332853 PYY3Q5JQD4 70 aa10.4□□□□□ -0.74
VSTM4-202ENST00000332853 PAPPA-AS1Q5QFB9 102 aa10.4□□□□□ -0.74
VSTM4-202ENST00000332853 KLHL30-AS1Q8NEE0 82 aa10.4□□□□□ -0.74
VSTM4-202ENST00000332853 AMN1Q8IY45 258 aa10.4□□□□□ -0.74
VSTM4-202ENST00000332853 MRAP2Q96G30 205 aa10.4□□□□□ -0.74
VSTM4-202ENST00000332853 SLC25A16P16260 332 aa10.4□□□□□ -0.75
VSTM4-202ENST00000332853 CIRBPQ14011 172 aaKnown RBP10.4□□□□□ -0.75
VSTM4-202ENST00000332853 SRSF8Q9BRL6 282 aaKnown RBP10.4□□□□□ -0.75
VSTM4-202ENST00000332853 USMG5Q96IX5 58 aa10.39□□□□□ -0.75
VSTM4-202ENST00000332853 RITA1Q96K30 269 aa10.39□□□□□ -0.75
VSTM4-202ENST00000332853 NXT2Q9NPJ8 142 aaKnown RBP10.39□□□□□ -0.75
VSTM4-202ENST00000332853 PEF1Q9UBV8 284 aaKnown RBP10.39□□□□□ -0.75
VSTM4-202ENST00000332853 RNASE1P07998 156 aaKnown RBP10.39□□□□□ -0.75
VSTM4-202ENST00000332853 C2orf88Q9BSF0 95 aa10.39□□□□□ -0.75
VSTM4-202ENST00000332853 LAMTOR2Q9Y2Q5 125 aa10.39□□□□□ -0.75
VSTM4-202ENST00000332853 FAM110DQ8TAY7 271 aaPredicted RBP10.39□□□□□ -0.75
VSTM4-202ENST00000332853 PRO3102Q9H379 93 aa10.39□□□□□ -0.75
VSTM4-202ENST00000332853 IGHV3-64A0A075B6Q5 118 aa10.39□□□□□ -0.75
VSTM4-202ENST00000332853 Q5PR19 223 aa10.39□□□□□ -0.75
VSTM4-202ENST00000332853 IFI27L1Q96BM0 104 aa10.39□□□□□ -0.75
VSTM4-202ENST00000332853 C9orf139Q6ZV77 190 aa10.39□□□□□ -0.75
VSTM4-202ENST00000332853 IL17RELQ6ZVW7 336 aa10.39□□□□□ -0.75
VSTM4-202ENST00000332853 Q96MF0 132 aa10.39□□□□□ -0.75
VSTM4-202ENST00000332853 TOMM7Q9P0U1 55 aa10.39□□□□□ -0.75
VSTM4-202ENST00000332853 LYPD1Q8N2G4 141 aa10.38□□□□□ -0.75
VSTM4-202ENST00000332853 SMIM12Q96EX1 92 aa10.38□□□□□ -0.75
VSTM4-202ENST00000332853 MRPL16Q9NX20 251 aaKnown RBP10.38□□□□□ -0.75
VSTM4-202ENST00000332853 SPTAN1Q13813 2472 aaKnown RBP10.38□□□□□ -0.75
VSTM4-202ENST00000332853 ARMS2P0C7Q2 107 aa10.38□□□□□ -0.75
VSTM4-202ENST00000332853 NDUFAF3Q9BU61 184 aa10.38□□□□□ -0.75
VSTM4-202ENST00000332853 APOMO95445 188 aa10.38□□□□□ -0.75
VSTM4-202ENST00000332853 PPBPP02775 128 aa10.38□□□□□ -0.75
VSTM4-202ENST00000332853 COX6CP09669 75 aa10.38□□□□□ -0.75
VSTM4-202ENST00000332853 C14orf178Q8N769 122 aaPredicted RBP10.38□□□□□ -0.75
VSTM4-202ENST00000332853 hDV102S1A0JD36 115 aa10.38□□□□□ -0.75
VSTM4-202ENST00000332853 NDUFS8O00217 210 aa10.38□□□□□ -0.75
VSTM4-202ENST00000332853 TTC9CQ8N5M4 171 aa10.38□□□□□ -0.75
VSTM4-202ENST00000332853 IGHV2-70P01814 119 aa10.37□□□□□ -0.75
VSTM4-202ENST00000332853 SFTA2Q6UW10 78 aa10.37□□□□□ -0.75
VSTM4-202ENST00000332853 CHTOPQ9Y3Y2 248 aaKnown RBP10.37□□□□□ -0.75
VSTM4-202ENST00000332853 TMEM213A2RRL7 107 aa10.37□□□□□ -0.75
VSTM4-202ENST00000332853 DPM2O94777 84 aa10.37□□□□□ -0.75
VSTM4-202ENST00000332853 RPL35AP18077 110 aaKnown RBP10.37□□□□□ -0.75
VSTM4-202ENST00000332853 VCX2Q9H322 139 aa10.37□□□□□ -0.75
VSTM4-202ENST00000332853 TRGV11A0A075B6L2 103 aa10.37□□□□□ -0.75
VSTM4-202ENST00000332853 PFN1P07737 140 aaKnown RBP10.37□□□□□ -0.75
VSTM4-202ENST00000332853 C10orf91Q5T1B1 145 aa10.37□□□□□ -0.75
VSTM4-202ENST00000332853 RASL11AQ6T310 242 aa10.37□□□□□ -0.75
VSTM4-202ENST00000332853 IGF2-ASQ6U949 168 aa10.37□□□□□ -0.75
VSTM4-202ENST00000332853 DPH3Q96FX2 82 aa10.37□□□□□ -0.75
VSTM4-202ENST00000332853 NCKAP5O14513 1909 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms