RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 A0A1W2PPV4 95 aa11.89□□□□□ -0.51
LRRC28-202ENST00000331450 SLC17A3O00476 420 aa11.89□□□□□ -0.51
LRRC28-202ENST00000331450 ZNF253O75346 499 aa11.89□□□□□ -0.51
LRRC28-202ENST00000331450 EIF3GO75821 320 aaKnown RBP eCLIP11.89□□□□□ -0.51
LRRC28-202ENST00000331450 TAS2R45P59539 299 aa11.89□□□□□ -0.51
LRRC28-202ENST00000331450 SNRPD3P62318 126 aaKnown RBP11.89□□□□□ -0.51
LRRC28-202ENST00000331450 ZNF726P1Q15940 193 aa11.89□□□□□ -0.51
LRRC28-202ENST00000331450 ZNF124Q15973 351 aa11.89□□□□□ -0.51
LRRC28-202ENST00000331450 GUK1Q16774 197 aa11.89□□□□□ -0.51
LRRC28-202ENST00000331450 SLC51BQ86UW2 128 aa11.89□□□□□ -0.51
LRRC28-202ENST00000331450 APRG1Q8IVJ8 170 aa11.89□□□□□ -0.51
LRRC28-202ENST00000331450 FXYD5Q96DB9 178 aa11.89□□□□□ -0.51
LRRC28-202ENST00000331450 OR51M1Q9H341 326 aa11.89□□□□□ -0.51
LRRC28-202ENST00000331450 SRD5A3Q9H8P0 318 aa11.89□□□□□ -0.51
LRRC28-202ENST00000331450 ZNF331Q9NQX6 463 aaPredicted RBP11.89□□□□□ -0.51
LRRC28-202ENST00000331450 TRBV19A0A075B6N1 114 aa11.88□□□□□ -0.51
LRRC28-202ENST00000331450 OR7C2O60412 319 aa11.88□□□□□ -0.51
LRRC28-202ENST00000331450 SNRPCP09234 159 aaKnown RBP11.88□□□□□ -0.51
LRRC28-202ENST00000331450 HIST1H1EP10412 219 aaKnown RBP11.88□□□□□ -0.51
LRRC28-202ENST00000331450 ID1P41134 155 aa11.88□□□□□ -0.51
LRRC28-202ENST00000331450 PSMG4Q5JS54 123 aa11.88□□□□□ -0.51
LRRC28-202ENST00000331450 LINC00322Q6ZN03 302 aaPredicted RBP11.88□□□□□ -0.51
LRRC28-202ENST00000331450 SSX7Q7RTT5 188 aa11.88□□□□□ -0.51
LRRC28-202ENST00000331450 RAB24Q969Q5 203 aa11.88□□□□□ -0.51
LRRC28-202ENST00000331450 C16orf92Q96LL3 132 aa11.88□□□□□ -0.51
LRRC28-202ENST00000331450 C20orf173Q96LM9 149 aa11.88□□□□□ -0.51
LRRC28-202ENST00000331450 SLC50A1Q9BRV3 221 aa11.88□□□□□ -0.51
LRRC28-202ENST00000331450 PAXXQ9BUH6 204 aa11.88□□□□□ -0.51
LRRC28-202ENST00000331450 H3BTX0 84 aa11.87□□□□□ -0.51
LRRC28-202ENST00000331450 NDUFB4O95168 129 aa11.87□□□□□ -0.51
LRRC28-202ENST00000331450 FRMD6-AS1P0C7T7 363 aa11.87□□□□□ -0.51
LRRC28-202ENST00000331450 STAG3L2P0CL84 134 aa11.87□□□□□ -0.51
LRRC28-202ENST00000331450 STAG3L3P0CL85 134 aa11.87□□□□□ -0.51
LRRC28-202ENST00000331450 C4BPBP20851 252 aa11.87□□□□□ -0.51
LRRC28-202ENST00000331450 PDE6HQ13956 83 aa11.87□□□□□ -0.51
LRRC28-202ENST00000331450 AKR1C8PQ5T2L2 129 aa11.87□□□□□ -0.51
LRRC28-202ENST00000331450 PQLC2Q6ZP29 291 aa11.87□□□□□ -0.51
LRRC28-202ENST00000331450 TMED6Q8WW62 240 aa11.87□□□□□ -0.51
LRRC28-202ENST00000331450 ACTR3CQ9C0K3 210 aaPredicted RBP11.87□□□□□ -0.51
LRRC28-202ENST00000331450 RBMY1BA6NDE4 496 aaKnown RBP11.86□□□□□ -0.51
LRRC28-202ENST00000331450 RBMY1EA6NEQ0 496 aaKnown RBP11.86□□□□□ -0.51
LRRC28-202ENST00000331450 UMAD1C9J7I0 102 aa11.86□□□□□ -0.51
LRRC28-202ENST00000331450 HMGB3O15347 200 aaKnown RBP11.86□□□□□ -0.51
LRRC28-202ENST00000331450 OR10J4P0C629 311 aa11.86□□□□□ -0.51
LRRC28-202ENST00000331450 RBMY1DP0C7P1 496 aaKnown RBP11.86□□□□□ -0.51
LRRC28-202ENST00000331450 UBE2L3P68036 154 aaKnown RBP11.86□□□□□ -0.51
LRRC28-202ENST00000331450 DEFB121Q5J5C9 76 aa11.86□□□□□ -0.51
LRRC28-202ENST00000331450 IGFL4Q6B9Z1 124 aa11.86□□□□□ -0.51
LRRC28-202ENST00000331450 RNF182Q8N6D2 247 aa11.86□□□□□ -0.51
LRRC28-202ENST00000331450 RNF141Q8WVD5 230 aa11.86□□□□□ -0.51
LRRC28-202ENST00000331450 CTXND1A0A1B0GTU2 59 aa11.85□□□□□ -0.51
LRRC28-202ENST00000331450 BOLA2-SMG1P6H3BVE0 249 aa11.85□□□□□ -0.51
LRRC28-202ENST00000331450 NBEAP1P0C6P0 100 aa11.85□□□□□ -0.51
LRRC28-202ENST00000331450 ARL14EPLP0DKL9 152 aa11.85□□□□□ -0.51
LRRC28-202ENST00000331450 HLA-DMBP28068 263 aa11.85□□□□□ -0.51
LRRC28-202ENST00000331450 LINC00052Q96N35 136 aa11.85□□□□□ -0.51
LRRC28-202ENST00000331450 TUBA4BQ9H853 241 aa11.85□□□□□ -0.51
LRRC28-202ENST00000331450 BOLA1Q9Y3E2 137 aa11.85□□□□□ -0.51
LRRC28-202ENST00000331450 AGRNO00468 2067 aa11.84□□□□□ -0.51
LRRC28-202ENST00000331450 DEFB1P60022 68 aa11.84□□□□□ -0.51
LRRC28-202ENST00000331450 SUN5Q8TC36 379 aa11.84□□□□□ -0.51
LRRC28-202ENST00000331450 LRRC20Q8TCA0 184 aa11.84□□□□□ -0.51
LRRC28-202ENST00000331450 BLNKQ8WV28 456 aa11.84□□□□□ -0.51
LRRC28-202ENST00000331450 PHYHIPLQ96FC7 376 aa11.84□□□□□ -0.51
LRRC28-202ENST00000331450 KNCNA6PVL3 124 aa11.83□□□□□ -0.52
LRRC28-202ENST00000331450 HLA-DRB4P13762 266 aa11.83□□□□□ -0.52
LRRC28-202ENST00000331450 FHITP49789 147 aa11.83□□□□□ -0.52
LRRC28-202ENST00000331450 PSG3Q16557 428 aa11.83□□□□□ -0.52
LRRC28-202ENST00000331450 GDF5OSQ5U4N7 250 aa11.83□□□□□ -0.52
LRRC28-202ENST00000331450 EIF5AL1Q6IS14 154 aaKnown RBP11.83□□□□□ -0.52
LRRC28-202ENST00000331450 DPPA3Q6W0C5 159 aa11.83□□□□□ -0.52
LRRC28-202ENST00000331450 FOXI2Q6ZQN5 318 aa11.83□□□□□ -0.52
LRRC28-202ENST00000331450 TRPT1Q86TN4 253 aaKnown RBP11.83□□□□□ -0.52
LRRC28-202ENST00000331450 B9D2Q9BPU9 175 aa11.83□□□□□ -0.52
LRRC28-202ENST00000331450 SAV1Q9H4B6 383 aaPredicted RBP11.83□□□□□ -0.52
LRRC28-202ENST00000331450 CLEC5AQ9NY25 188 aa11.83□□□□□ -0.52
LRRC28-202ENST00000331450 HLA-DRB4X5D2U9 266 aa11.83□□□□□ -0.52
LRRC28-202ENST00000331450 LOC102724200A0A096LPH7 203 aaPredicted RBP11.82□□□□□ -0.52
LRRC28-202ENST00000331450 A0A0J9YX75 114 aa11.82□□□□□ -0.52
LRRC28-202ENST00000331450 CXorf1O96002 111 aa11.82□□□□□ -0.52
LRRC28-202ENST00000331450 GCHFRP30047 84 aa11.82□□□□□ -0.52
LRRC28-202ENST00000331450 PSG9Q00887 426 aa11.82□□□□□ -0.52
LRRC28-202ENST00000331450 ACTL10Q5JWF8 245 aa11.82□□□□□ -0.52
LRRC28-202ENST00000331450 MAP1LC3B2A6NCE7 125 aa11.81□□□□□ -0.52
LRRC28-202ENST00000331450 A8MTW9 85 aa11.81□□□□□ -0.52
LRRC28-202ENST00000331450 F6UB75 175 aa11.81□□□□□ -0.52
LRRC28-202ENST00000331450 H3BMM0 161 aa11.81□□□□□ -0.52
LRRC28-202ENST00000331450 SULT1A2P50226 295 aa11.81□□□□□ -0.52
LRRC28-202ENST00000331450 LYPD1Q8N2G4 141 aa11.81□□□□□ -0.52
LRRC28-202ENST00000331450 EXOC3-AS1Q8N2X6 119 aa11.81□□□□□ -0.52
LRRC28-202ENST00000331450 ZNF738Q8NE65 137 aa11.81□□□□□ -0.52
LRRC28-202ENST00000331450 FAM213BQ8TBF2 198 aa11.81□□□□□ -0.52
LRRC28-202ENST00000331450 MRPL53Q96EL3 112 aaKnown RBP11.81□□□□□ -0.52
LRRC28-202ENST00000331450 CLUHP3Q96NS8 147 aa11.81□□□□□ -0.52
LRRC28-202ENST00000331450 MAP1LC3BQ9GZQ8 125 aa11.81□□□□□ -0.52
LRRC28-202ENST00000331450 M0R3E3 92 aa11.8□□□□□ -0.52
LRRC28-202ENST00000331450 RAB5CP51148 216 aa11.8□□□□□ -0.52
LRRC28-202ENST00000331450 SBSPONQ8IVN8 264 aa11.8□□□□□ -0.52
LRRC28-202ENST00000331450 STHQ8IWL8 128 aa11.8□□□□□ -0.52
LRRC28-202ENST00000331450 MBD3L1Q8WWY6 194 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms