RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 ENY2Q9NPA8 101 aa9.48□□□□□ -0.89
SHMT2-201ENST00000328923 KMT2BQ9UMN6 2715 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-201ENST00000328923 PEX7O00628 323 aa9.47□□□□□ -0.89
SHMT2-201ENST00000328923 GNG5P63218 68 aa9.47□□□□□ -0.89
SHMT2-201ENST00000328923 SRYQ05066 204 aa9.47□□□□□ -0.89
SHMT2-201ENST00000328923 PRR30Q53SZ7 412 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-201ENST00000328923 HES3Q5TGS1 186 aa9.47□□□□□ -0.89
SHMT2-201ENST00000328923 ZFP2Q6ZN57 461 aa9.47□□□□□ -0.89
SHMT2-201ENST00000328923 ANKRD29Q8N6D5 301 aa9.47□□□□□ -0.89
SHMT2-201ENST00000328923 FAM234AQ9H0X4 552 aa9.47□□□□□ -0.89
SHMT2-201ENST00000328923 TET2Q6N021 2002 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-201ENST00000328923 TMEM30CPA0ZSE6 113 aa9.47□□□□□ -0.89
SHMT2-201ENST00000328923 GTSCR1Q86UQ5 136 aa9.47□□□□□ -0.89
SHMT2-201ENST00000328923 PRRG4Q9BZD6 226 aa9.47□□□□□ -0.89
SHMT2-201ENST00000328923 OBP2BQ9NPH6 170 aa9.47□□□□□ -0.89
SHMT2-201ENST00000328923 SPANXA1Q9NS26 97 aa9.47□□□□□ -0.89
SHMT2-201ENST00000328923 PTPRBP23467 1997 aa9.46□□□□□ -0.89
SHMT2-201ENST00000328923 MFAP4P55083 255 aa9.46□□□□□ -0.89
SHMT2-201ENST00000328923 MOB3BQ86TA1 216 aa9.46□□□□□ -0.89
SHMT2-201ENST00000328923 CIARTQ8N365 385 aaPredicted RBP9.46□□□□□ -0.89
SHMT2-201ENST00000328923 MAPKAPK5-AS1Q8N8E1 139 aa9.46□□□□□ -0.89
SHMT2-201ENST00000328923 OR9G1Q8NH87 305 aa9.46□□□□□ -0.89
SHMT2-201ENST00000328923 HIST1H4GQ99525 98 aa9.46□□□□□ -0.89
SHMT2-201ENST00000328923 CITED2Q99967 270 aaPredicted RBP9.46□□□□□ -0.89
SHMT2-201ENST00000328923 RTL8AQ9BWD3 113 aa9.46□□□□□ -0.89
SHMT2-201ENST00000328923 C21orf62Q9NYP8 219 aa9.46□□□□□ -0.89
SHMT2-201ENST00000328923 LOC107984156A0A0G2JMH3 177 aa9.46□□□□□ -0.9
SHMT2-201ENST00000328923 WI2-2373I1.2A0A1W2PRP0 233 aa9.46□□□□□ -0.9
SHMT2-201ENST00000328923 OOEPA6NGQ2 149 aa9.46□□□□□ -0.9
SHMT2-201ENST00000328923 H3BVH4 76 aa9.46□□□□□ -0.9
SHMT2-201ENST00000328923 NDUFS7O75251 213 aa9.46□□□□□ -0.9
SHMT2-201ENST00000328923 MRPL33O75394 65 aaKnown RBP9.46□□□□□ -0.9
SHMT2-201ENST00000328923 NGFP01138 241 aa9.46□□□□□ -0.9
SHMT2-201ENST00000328923 FOLR3P41439 243 aa9.46□□□□□ -0.9
SHMT2-201ENST00000328923 FOXG1P55316 489 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-201ENST00000328923 UBE2L3P68036 154 aaKnown RBP9.46□□□□□ -0.9
SHMT2-201ENST00000328923 MORN5Q5VZ52 161 aa9.46□□□□□ -0.9
SHMT2-201ENST00000328923 ARL17AQ8IVW1 177 aa9.46□□□□□ -0.9
SHMT2-201ENST00000328923 HHLA3Q9XRX5 114 aa9.46□□□□□ -0.9
SHMT2-201ENST00000328923 C12orf77C9JDV5 145 aa9.45□□□□□ -0.9
SHMT2-201ENST00000328923 ZNHIT1O43257 154 aa9.45□□□□□ -0.9
SHMT2-201ENST00000328923 P01737 135 aa9.45□□□□□ -0.9
SHMT2-201ENST00000328923 Q6Q795 121 aa9.45□□□□□ -0.9
SHMT2-201ENST00000328923 FAM173AQ9BQD7 235 aa9.45□□□□□ -0.9
SHMT2-201ENST00000328923 CHCHD5Q9BSY4 110 aa9.45□□□□□ -0.9
SHMT2-201ENST00000328923 TRAV8-2A0A0B4J237 113 aa9.45□□□□□ -0.9
SHMT2-201ENST00000328923 TRGV8A0A0C4DH27 118 aa9.45□□□□□ -0.9
SHMT2-201ENST00000328923 ZNF329Q86UD4 541 aa9.45□□□□□ -0.9
SHMT2-201ENST00000328923 TMEM158Q8WZ71 300 aa9.45□□□□□ -0.9
SHMT2-201ENST00000328923 CEP295Q9C0D2 2601 aa9.45□□□□□ -0.9
SHMT2-201ENST00000328923 IL4P05112 153 aa9.44□□□□□ -0.9
SHMT2-201ENST00000328923 PLGLB1Q02325 96 aa9.44□□□□□ -0.9
SHMT2-201ENST00000328923 ZNF474Q6S9Z5 364 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-201ENST00000328923 PIFOQ8TCI5 191 aa9.44□□□□□ -0.9
SHMT2-201ENST00000328923 RND1Q92730 232 aa9.44□□□□□ -0.9
SHMT2-201ENST00000328923 MRPL32Q9BYC8 188 aaKnown RBP9.44□□□□□ -0.9
SHMT2-201ENST00000328923 PRSS22Q9GZN4 317 aa9.44□□□□□ -0.9
SHMT2-201ENST00000328923 USP24Q9UPU5 2620 aa9.44□□□□□ -0.9
SHMT2-201ENST00000328923 SIGLEC9Q9Y336 463 aa9.44□□□□□ -0.9
SHMT2-201ENST00000328923 LINC00473A8K010 186 aa9.44□□□□□ -0.9
SHMT2-201ENST00000328923 HAX1O00165 279 aa9.44□□□□□ -0.9
SHMT2-201ENST00000328923 HBDP02042 147 aa9.44□□□□□ -0.9
SHMT2-201ENST00000328923 PYYP10082 97 aa9.44□□□□□ -0.9
SHMT2-201ENST00000328923 SPRNQ5BIV9 151 aa9.44□□□□□ -0.9
SHMT2-201ENST00000328923 RAXQ9Y2V3 346 aa9.44□□□□□ -0.9
SHMT2-201ENST00000328923 A0A096LPE4 126 aa9.43□□□□□ -0.9
SHMT2-201ENST00000328923 A0A1W2PPZ6 126 aa9.43□□□□□ -0.9
SHMT2-201ENST00000328923 A8MWV9 139 aa9.43□□□□□ -0.9
SHMT2-201ENST00000328923 C9JAW5 83 aa9.43□□□□□ -0.9
SHMT2-201ENST00000328923 ATP5IP56385 69 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-201ENST00000328923 KLF17Q5JT82 389 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-201ENST00000328923 C6orf15Q6UXA7 325 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-201ENST00000328923 OR10J6PQ8NGY7 276 aa9.43□□□□□ -0.9
SHMT2-201ENST00000328923 HIGD1AQ9Y241 93 aa9.43□□□□□ -0.9
SHMT2-201ENST00000328923 BOD1L1Q8NFC6 3051 aa9.43□□□□□ -0.9
SHMT2-201ENST00000328923 ZNF503-AS2A6NEH8 195 aa9.43□□□□□ -0.9
SHMT2-201ENST00000328923 CDX4O14627 284 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-201ENST00000328923 HOXA3O43365 443 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-201ENST00000328923 IGHV3-9P01782 118 aa9.43□□□□□ -0.9
SHMT2-201ENST00000328923 CD59P13987 128 aa9.43□□□□□ -0.9
SHMT2-201ENST00000328923 DUTP33316 252 aaKnown RBP9.43□□□□□ -0.9
SHMT2-201ENST00000328923 VKORC1L1Q8N0U8 176 aa9.43□□□□□ -0.9
SHMT2-201ENST00000328923 ITLN1Q8WWA0 313 aa9.43□□□□□ -0.9
SHMT2-201ENST00000328923 COQ2Q96H96 371 aa9.43□□□□□ -0.9
SHMT2-201ENST00000328923 TRAV8-1A0A0A6YYK1 113 aa9.42□□□□□ -0.9
SHMT2-201ENST00000328923 F5H768 121 aa9.42□□□□□ -0.9
SHMT2-201ENST00000328923 C8orf88P0DMB2 117 aa9.42□□□□□ -0.9
SHMT2-201ENST00000328923 TAL2Q16559 108 aa9.42□□□□□ -0.9
SHMT2-201ENST00000328923 WDR86Q86TI4 376 aa9.42□□□□□ -0.9
SHMT2-201ENST00000328923 OR1L4Q8NGR5 311 aa9.42□□□□□ -0.9
SHMT2-201ENST00000328923 SLC25A2Q9BXI2 301 aa9.42□□□□□ -0.9
SHMT2-201ENST00000328923 EDA2RQ9HAV5 297 aa9.42□□□□□ -0.9
SHMT2-201ENST00000328923 CHD6Q8TD26 2715 aa9.42□□□□□ -0.9
SHMT2-201ENST00000328923 TRBV7-3A0A075B6L6 115 aa9.42□□□□□ -0.9
SHMT2-201ENST00000328923 TRAV3A0A0B4J244 114 aa9.42□□□□□ -0.9
SHMT2-201ENST00000328923 SRRM4A7MD48 611 aaKnown RBP9.42□□□□□ -0.9
SHMT2-201ENST00000328923 ASIPP42127 132 aa9.42□□□□□ -0.9
SHMT2-201ENST00000328923 TMEM101Q96IK0 257 aa9.42□□□□□ -0.9
SHMT2-201ENST00000328923 RITA1Q96K30 269 aa9.42□□□□□ -0.9
SHMT2-201ENST00000328923 URB1O60287 2271 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms