RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.09□□□□□ -0.63
ATP2C1-201ENST00000328560 LEPROTL1O95214 131 aa11.09□□□□□ -0.63
ATP2C1-201ENST00000328560 IGLL1P15814 213 aa11.09□□□□□ -0.63
ATP2C1-201ENST00000328560 Q6ZVH6 145 aa11.09□□□□□ -0.63
ATP2C1-201ENST00000328560 ZNF491Q8N8L2 437 aa11.09□□□□□ -0.63
ATP2C1-201ENST00000328560 SHANK2-AS3Q9BTD1 123 aa11.09□□□□□ -0.63
ATP2C1-201ENST00000328560 PSG8Q9UQ74 426 aa11.09□□□□□ -0.63
ATP2C1-201ENST00000328560 LOC105371242A0A075B767 164 aa11.08□□□□□ -0.64
ATP2C1-201ENST00000328560 SERTM2A0A1B0GWG4 89 aa11.08□□□□□ -0.64
ATP2C1-201ENST00000328560 C2orf70A6NJV1 201 aa11.08□□□□□ -0.64
ATP2C1-201ENST00000328560 K7EQM0 130 aa11.08□□□□□ -0.64
ATP2C1-201ENST00000328560 IGLV2-11P01706 119 aa11.08□□□□□ -0.64
ATP2C1-201ENST00000328560 SMIM12Q96EX1 92 aa11.08□□□□□ -0.64
ATP2C1-201ENST00000328560 TRAV9-2A0A087WT02 112 aa11.08□□□□□ -0.64
ATP2C1-201ENST00000328560 LINC00614P0C842 121 aa11.08□□□□□ -0.64
ATP2C1-201ENST00000328560 IGHV1-24A0A0C4DH33 117 aa11.08□□□□□ -0.64
ATP2C1-201ENST00000328560 OR4C46A6NHA9 309 aa11.08□□□□□ -0.64
ATP2C1-201ENST00000328560 LY6LH3BQJ8 138 aa11.08□□□□□ -0.64
ATP2C1-201ENST00000328560 LOC102724200A0A096LPH7 203 aaPredicted RBP11.07□□□□□ -0.64
ATP2C1-201ENST00000328560 FBXL19-AS1Q494R0 122 aa11.07□□□□□ -0.64
ATP2C1-201ENST00000328560 IGFL4Q6B9Z1 124 aa11.07□□□□□ -0.64
ATP2C1-201ENST00000328560 TMEM14CQ9P0S9 112 aa11.07□□□□□ -0.64
ATP2C1-201ENST00000328560 hDV102S1A0JD36 115 aa11.07□□□□□ -0.64
ATP2C1-201ENST00000328560 TSPOP30536 169 aa11.07□□□□□ -0.64
ATP2C1-201ENST00000328560 CT83Q5H943 113 aa11.07□□□□□ -0.64
ATP2C1-201ENST00000328560 C8orf49Q96NF6 230 aa11.07□□□□□ -0.64
ATP2C1-201ENST00000328560 A0A1B0GUT8 65 aa11.07□□□□□ -0.64
ATP2C1-201ENST00000328560 CT45A10P0DMU9 189 aa11.07□□□□□ -0.64
ATP2C1-201ENST00000328560 ASH1LQ9NR48 2969 aaKnown RBP11.07□□□□□ -0.64
ATP2C1-201ENST00000328560 H3BRN7 92 aa11.06□□□□□ -0.64
ATP2C1-201ENST00000328560 SIGLEC15Q6ZMC9 328 aa11.06□□□□□ -0.64
ATP2C1-201ENST00000328560 NEU4Q8WWR8 484 aaPredicted RBP11.06□□□□□ -0.64
ATP2C1-201ENST00000328560 TMUB1Q9BVT8 246 aa11.06□□□□□ -0.64
ATP2C1-201ENST00000328560 OR2T8A6NH00 312 aa11.06□□□□□ -0.64
ATP2C1-201ENST00000328560 C5orf64Q2M2E5 130 aa11.06□□□□□ -0.64
ATP2C1-201ENST00000328560 AAMDCQ9H7C9 122 aa11.06□□□□□ -0.64
ATP2C1-201ENST00000328560 SOX21Q9Y651 276 aaPredicted RBP11.06□□□□□ -0.64
ATP2C1-201ENST00000328560 LOC389332A0A1B0GUA5 103 aa11.05□□□□□ -0.64
ATP2C1-201ENST00000328560 MFAP4P55083 255 aa11.05□□□□□ -0.64
ATP2C1-201ENST00000328560 ADORA2A-AS1P86434 159 aa11.05□□□□□ -0.64
ATP2C1-201ENST00000328560 RNF5Q99942 180 aa11.05□□□□□ -0.64
ATP2C1-201ENST00000328560 GFRA4Q9GZZ7 299 aa11.05□□□□□ -0.64
ATP2C1-201ENST00000328560 NCOR2Q9Y618 2525 aa11.05□□□□□ -0.64
ATP2C1-201ENST00000328560 IGKV2-40A0A087WW87 121 aaPredicted RBP11.05□□□□□ -0.64
ATP2C1-201ENST00000328560 ZNF785A8K8V0 405 aa11.05□□□□□ -0.64
ATP2C1-201ENST00000328560 IGKV2D-40P01614 121 aaPredicted RBP11.05□□□□□ -0.64
ATP2C1-201ENST00000328560 NDPQ00604 133 aa11.05□□□□□ -0.64
ATP2C1-201ENST00000328560 FAM162BQ5T6X4 162 aa11.05□□□□□ -0.64
ATP2C1-201ENST00000328560 DMRTA1Q5VZB9 504 aa11.05□□□□□ -0.64
ATP2C1-201ENST00000328560 UNQ5815/PRO19632Q6UWF5 114 aa11.05□□□□□ -0.64
ATP2C1-201ENST00000328560 ZNF414Q96IQ9 312 aa11.05□□□□□ -0.64
ATP2C1-201ENST00000328560 SYS1-DBNDD2H3BUS1 97 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 RIGQ13278 110 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 PSG3Q16557 428 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 MRPL52Q86TS9 123 aaKnown RBP11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 DYNAPQ8N1N2 210 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 PRSS3P2Q8NHM4 247 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 ARPC1AQ92747 370 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 NDUFS7O75251 213 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 CSN1S1P47710 185 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 CFHR4Q92496 578 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 SPTBN4Q9H254 2564 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 TMEM238LA0A1B0GVL6 79 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 C20orf202A1L168 122 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 TCF21O43680 179 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 APOHP02749 345 aaPredicted RBP11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 CRIP1P50238 77 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 NHLH1Q02575 133 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 LY6DQ14210 128 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 CCDC144NLQ6NUI1 221 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 S100A7AQ86SG5 101 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 C21orf62Q9NYP8 219 aa11.04□□□□□ -0.64
ATP2C1-201ENST00000328560 NPIPB6E9PJ23 425 aa11.03□□□□□ -0.64
ATP2C1-201ENST00000328560 NDUFB8O95169 186 aa11.03□□□□□ -0.64
ATP2C1-201ENST00000328560 FAM120AOSQ5T036 256 aa11.03□□□□□ -0.64
ATP2C1-201ENST00000328560 ERASQ7Z444 233 aa11.03□□□□□ -0.64
ATP2C1-201ENST00000328560 Q8TAT8 98 aa11.03□□□□□ -0.64
ATP2C1-201ENST00000328560 FANCD2OSQ96PS1 177 aa11.03□□□□□ -0.64
ATP2C1-201ENST00000328560 UBTD1Q9HAC8 227 aa11.03□□□□□ -0.64
ATP2C1-201ENST00000328560 RNF24Q9Y225 148 aa11.03□□□□□ -0.64
ATP2C1-201ENST00000328560 ZFP30Q9Y2G7 519 aa11.03□□□□□ -0.64
ATP2C1-201ENST00000328560 LY6G5BQ8NDX9 201 aa11.03□□□□□ -0.64
ATP2C1-201ENST00000328560 CHCHD1Q96BP2 118 aaKnown RBP11.03□□□□□ -0.64
ATP2C1-201ENST00000328560 SVEP1Q4LDE5 3571 aa11.03□□□□□ -0.64
ATP2C1-201ENST00000328560 HAX1O00165 279 aa11.03□□□□□ -0.64
ATP2C1-201ENST00000328560 TCTAP57738 103 aa11.03□□□□□ -0.64
ATP2C1-201ENST00000328560 MAP1LC3CQ9BXW4 147 aa11.03□□□□□ -0.64
ATP2C1-201ENST00000328560 CHD8Q9HCK8 2581 aa11.02□□□□□ -0.64
ATP2C1-201ENST00000328560 IGHV3OR16-13A0A075B7E8 117 aa11.02□□□□□ -0.65
ATP2C1-201ENST00000328560 IGHV3-74A0A0B4J1X5 117 aa11.02□□□□□ -0.65
ATP2C1-201ENST00000328560 HSBP1L1C9JCN9 74 aa11.02□□□□□ -0.65
ATP2C1-201ENST00000328560 FXYD7P58549 80 aa11.02□□□□□ -0.65
ATP2C1-201ENST00000328560 FA2HQ7L5A8 372 aa11.02□□□□□ -0.65
ATP2C1-201ENST00000328560 VMO1Q7Z5L0 202 aa11.02□□□□□ -0.65
ATP2C1-201ENST00000328560 OR11H6Q8NGC7 330 aa11.02□□□□□ -0.65
ATP2C1-201ENST00000328560 NDFIP1Q9BT67 221 aa11.02□□□□□ -0.65
ATP2C1-201ENST00000328560 TMEM213A2RRL7 107 aa11.02□□□□□ -0.65
ATP2C1-201ENST00000328560 PRTN3P24158 256 aa11.02□□□□□ -0.65
ATP2C1-201ENST00000328560 HLA-DMBP28068 263 aa11.02□□□□□ -0.65
ATP2C1-201ENST00000328560 PAX2Q02962 417 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms