RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 CNIH1O95406 144 aa12.37□□□□□ -0.43
SHROOM1-201ENST00000319854 NHLH1Q02575 133 aa12.37□□□□□ -0.43
SHROOM1-201ENST00000319854 HES1Q14469 280 aa12.37□□□□□ -0.43
SHROOM1-201ENST00000319854 GTSF1Q8WW33 167 aa12.37□□□□□ -0.43
SHROOM1-201ENST00000319854 SMIM12Q96EX1 92 aa12.37□□□□□ -0.43
SHROOM1-201ENST00000319854 JMJD8Q96S16 334 aa12.37□□□□□ -0.43
SHROOM1-201ENST00000319854 PSMB11A5LHX3 300 aa12.36□□□□□ -0.43
SHROOM1-201ENST00000319854 GAGE10A6NGK3 116 aa12.36□□□□□ -0.43
SHROOM1-201ENST00000319854 RPL27AP46776 148 aaKnown RBP12.36□□□□□ -0.43
SHROOM1-201ENST00000319854 SUB1P53999 127 aaKnown RBP eCLIP12.36□□□□□ -0.43
SHROOM1-201ENST00000319854 TMEM191AQ9H0A3 160 aa12.36□□□□□ -0.43
SHROOM1-201ENST00000319854 KAAG1Q9UBP8 84 aa12.36□□□□□ -0.43
SHROOM1-201ENST00000319854 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.36□□□□□ -0.434e-13■■■□□ 19
SHROOM1-201ENST00000319854 NBEAP1P0C6P0 100 aa12.36□□□□□ -0.43
SHROOM1-201ENST00000319854 HIST1H1AQ02539 215 aaPredicted RBP12.36□□□□□ -0.43
SHROOM1-201ENST00000319854 LINC00305Q7Z4B0 112 aa12.36□□□□□ -0.43
SHROOM1-201ENST00000319854 TEX45Q8NA69 505 aa12.36□□□□□ -0.43
SHROOM1-201ENST00000319854 PGLYRP4Q96LB8 373 aa12.36□□□□□ -0.43
SHROOM1-201ENST00000319854 BUB1B-PAK6H3BSN5 160 aa12.36□□□□□ -0.43
SHROOM1-201ENST00000319854 GOSR1O95249 250 aa12.36□□□□□ -0.43
SHROOM1-201ENST00000319854 MC5RP33032 325 aa12.36□□□□□ -0.43
SHROOM1-201ENST00000319854 UFSP1Q6NVU6 142 aa12.36□□□□□ -0.43
SHROOM1-201ENST00000319854 PATE2Q6UY27 113 aa12.36□□□□□ -0.43
SHROOM1-201ENST00000319854 CELSR2Q9HCU4 2923 aa12.35□□□□□ -0.43
SHROOM1-201ENST00000319854 KLF17Q5JT82 389 aaPredicted RBP12.35□□□□□ -0.43
SHROOM1-201ENST00000319854 HBBP68871 147 aa12.35□□□□□ -0.43
SHROOM1-201ENST00000319854 PAXXQ9BUH6 204 aa12.35□□□□□ -0.43
SHROOM1-201ENST00000319854 G3V4G9 280 aa12.34□□□□□ -0.43
SHROOM1-201ENST00000319854 TIMM23O14925 209 aa12.34□□□□□ -0.43
SHROOM1-201ENST00000319854 NCR2O95944 276 aa12.34□□□□□ -0.43
SHROOM1-201ENST00000319854 CSN3P07498 182 aa12.34□□□□□ -0.43
SHROOM1-201ENST00000319854 TCTAP57738 103 aa12.34□□□□□ -0.43
SHROOM1-201ENST00000319854 KLRB1Q12918 225 aa12.34□□□□□ -0.43
SHROOM1-201ENST00000319854 MRGPRG-AS1Q2M3A8 158 aa12.34□□□□□ -0.43
SHROOM1-201ENST00000319854 SIGLEC9Q9Y336 463 aa12.34□□□□□ -0.43
SHROOM1-201ENST00000319854 IGKV1D-37A0A075B6S9 117 aa12.34□□□□□ -0.43
SHROOM1-201ENST00000319854 TMUB1Q9BVT8 246 aa12.34□□□□□ -0.43
SHROOM1-201ENST00000319854 FAM208BQ5VWN6 2430 aa12.34□□□□□ -0.43
SHROOM1-201ENST00000319854 HLA-DRB1P01911 266 aa12.34□□□□□ -0.43
SHROOM1-201ENST00000319854 HIST1H1EP10412 219 aaKnown RBP12.34□□□□□ -0.43
SHROOM1-201ENST00000319854 PPP1R27Q86WC6 154 aa12.34□□□□□ -0.43
SHROOM1-201ENST00000319854 LINC00311Q8N616 119 aa12.34□□□□□ -0.43
SHROOM1-201ENST00000319854 CACNG8Q8WXS5 425 aa12.34□□□□□ -0.43
SHROOM1-201ENST00000319854 CHCHD1Q96BP2 118 aaKnown RBP12.34□□□□□ -0.43
SHROOM1-201ENST00000319854 IGLV1-47P01700 117 aa12.33□□□□□ -0.44
SHROOM1-201ENST00000319854 RBP4P02753 201 aa12.33□□□□□ -0.44
SHROOM1-201ENST00000319854 Q71RC1 249 aaPredicted RBP12.33□□□□□ -0.44
SHROOM1-201ENST00000319854 MAP1LC3CQ9BXW4 147 aa12.33□□□□□ -0.44
SHROOM1-201ENST00000319854 TCRBV4S1A1TA0A5B7 111 aa12.33□□□□□ -0.44
SHROOM1-201ENST00000319854 FNDC10F2Z333 226 aa12.33□□□□□ -0.44
SHROOM1-201ENST00000319854 PAX2Q02962 417 aa12.33□□□□□ -0.44
SHROOM1-201ENST00000319854 ATP5L2Q7Z4Y8 100 aa12.33□□□□□ -0.44
SHROOM1-201ENST00000319854 POLQO75417 2590 aa12.33□□□□□ -0.44
SHROOM1-201ENST00000319854 LGALS7P47929 136 aa12.32□□□□□ -0.44
SHROOM1-201ENST00000319854 TMEM97Q5BJF2 176 aa12.32□□□□□ -0.44
SHROOM1-201ENST00000319854 COX8AP10176 69 aa12.32□□□□□ -0.44
SHROOM1-201ENST00000319854 HTR1DP28221 377 aa12.32□□□□□ -0.44
SHROOM1-201ENST00000319854 LYZP61626 148 aa12.32□□□□□ -0.44
SHROOM1-201ENST00000319854 ASCL2Q99929 193 aa12.32□□□□□ -0.44
SHROOM1-201ENST00000319854 CSMD2Q7Z408 3487 aa12.32□□□□□ -0.44
SHROOM1-201ENST00000319854 H3BUT2 72 aa12.32□□□□□ -0.44
SHROOM1-201ENST00000319854 PET117Q6UWS5 81 aa12.32□□□□□ -0.44
SHROOM1-201ENST00000319854 C5orf17Q8NAS9 161 aa12.32□□□□□ -0.44
SHROOM1-201ENST00000319854 RAB1BQ9H0U4 201 aa12.32□□□□□ -0.44
SHROOM1-201ENST00000319854 SRSF12Q8WXF0 261 aaKnown RBP12.31□□□□□ -0.44
SHROOM1-201ENST00000319854 FXYD5Q96DB9 178 aa12.31□□□□□ -0.44
SHROOM1-201ENST00000319854 C19orf24Q9BVV8 132 aa12.31□□□□□ -0.44
SHROOM1-201ENST00000319854 MS4A6AQ9H2W1 248 aa12.31□□□□□ -0.44
SHROOM1-201ENST00000319854 BMI1P35226 326 aa12.31□□□□□ -0.44
SHROOM1-201ENST00000319854 BPIFA4PQ86YQ2 179 aa12.31□□□□□ -0.44
SHROOM1-201ENST00000319854 TMEM116Q8NCL8 245 aa12.31□□□□□ -0.44
SHROOM1-201ENST00000319854 LIPFP07098 398 aa12.3□□□□□ -0.44
SHROOM1-201ENST00000319854 LINC01545Q5VT33 79 aa12.3□□□□□ -0.44
SHROOM1-201ENST00000319854 OR1N2Q8NGR9 330 aa12.3□□□□□ -0.44
SHROOM1-201ENST00000319854 A0A1W2PPR1 153 aa12.3□□□□□ -0.44
SHROOM1-201ENST00000319854 FSTL3O95633 263 aa12.3□□□□□ -0.44
SHROOM1-201ENST00000319854 OR4A5Q8NH83 315 aa12.3□□□□□ -0.44
SHROOM1-201ENST00000319854 NEU4Q8WWR8 484 aaPredicted RBP12.3□□□□□ -0.44
SHROOM1-201ENST00000319854 RPP21Q9H633 154 aaKnown RBP12.3□□□□□ -0.44
SHROOM1-201ENST00000319854 NCBP2LA6PVI3 153 aaKnown RBP12.3□□□□□ -0.44
SHROOM1-201ENST00000319854 PRSS22Q9GZN4 317 aa12.3□□□□□ -0.44
SHROOM1-201ENST00000319854 USP9YO00507 2555 aaPredicted RBP12.3□□□□□ -0.44
SHROOM1-201ENST00000319854 USP9XQ93008 2570 aaPredicted RBP12.3□□□□□ -0.44
SHROOM1-201ENST00000319854 SLC25A5P05141 298 aaKnown RBP12.29□□□□□ -0.44
SHROOM1-201ENST00000319854 FGF6P10767 208 aa12.29□□□□□ -0.44
SHROOM1-201ENST00000319854 PIP4P2Q8N4L2 257 aa12.29□□□□□ -0.44
SHROOM1-201ENST00000319854 TNFRSF14Q92956 283 aa12.29□□□□□ -0.44
SHROOM1-201ENST00000319854 RAB37Q96AX2 223 aa12.29□□□□□ -0.44
SHROOM1-201ENST00000319854 TIMD4Q96H15 378 aa12.29□□□□□ -0.44
SHROOM1-201ENST00000319854 MLST8Q9BVC4 326 aa12.29□□□□□ -0.44
SHROOM1-201ENST00000319854 MRPL32Q9BYC8 188 aaKnown RBP12.29□□□□□ -0.44
SHROOM1-201ENST00000319854 UBTD1Q9HAC8 227 aa12.29□□□□□ -0.44
SHROOM1-201ENST00000319854 EPDR1Q9UM22 224 aa12.29□□□□□ -0.44
SHROOM1-201ENST00000319854 PGPA6NDG6 321 aa12.29□□□□□ -0.44
SHROOM1-201ENST00000319854 C9orf118A6NHY6 69 aa12.29□□□□□ -0.44
SHROOM1-201ENST00000319854 IGHV3-23P01764 117 aa12.29□□□□□ -0.44
SHROOM1-201ENST00000319854 MYCNOSP40205 109 aa12.29□□□□□ -0.44
SHROOM1-201ENST00000319854 FAM162BQ5T6X4 162 aa12.29□□□□□ -0.44
SHROOM1-201ENST00000319854 RABAC1Q9UI14 185 aa12.29□□□□□ -0.44
SHROOM1-201ENST00000319854 OR1L4Q8NGR5 311 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms