RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 COX8AP10176 69 aa10.38□□□□□ -0.75
CPNE1-201ENST00000317677 USF1P22415 310 aaPredicted RBP10.38□□□□□ -0.75
CPNE1-201ENST00000317677 LMO4P61968 165 aa10.38□□□□□ -0.75
CPNE1-201ENST00000317677 SLAQ13239 276 aa10.38□□□□□ -0.75
CPNE1-201ENST00000317677 VSTM2AQ8TAG5 236 aa10.38□□□□□ -0.75
CPNE1-201ENST00000317677 NDUFA4L2Q9NRX3 87 aa10.38□□□□□ -0.75
CPNE1-201ENST00000317677 ENSAO43768 121 aaKnown RBP10.37□□□□□ -0.75
CPNE1-201ENST00000317677 DEFA4P12838 97 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 PRTN3P24158 256 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 GCHFRP30047 84 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 GNG4P50150 75 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 CRYBA4P53673 196 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 CKS1BP61024 79 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 RPL8P62917 257 aaKnown RBP10.37□□□□□ -0.75
CPNE1-201ENST00000317677 C5orf64Q2M2E5 130 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 TREML4Q6UXN2 200 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 CHCHD1Q96BP2 118 aaKnown RBP10.37□□□□□ -0.75
CPNE1-201ENST00000317677 NAV3Q8IVL0 2385 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 A0A087X0K7 114 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 hDV102S1A0JD36 115 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 HELTA6NFD8 242 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 RNASE2P10153 161 aaKnown RBP10.37□□□□□ -0.75
CPNE1-201ENST00000317677 GCSAMLQ5JQS6 135 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 C2orf91Q6ZV80 131 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 MOB3BQ86TA1 216 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 KIR3DL3Q8N743 410 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 OR10AG1Q8NH19 301 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 DPF1Q92782 380 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 PLEKHA3Q9HB20 300 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 INSIG2Q9Y5U4 225 aa10.37□□□□□ -0.75
CPNE1-201ENST00000317677 MED13LQ71F56 2210 aa10.36□□□□□ -0.75
CPNE1-201ENST00000317677 TRAV26-1A0A087WT03 109 aa10.36□□□□□ -0.75
CPNE1-201ENST00000317677 SERTM2A0A1B0GWG4 89 aa10.36□□□□□ -0.75
CPNE1-201ENST00000317677 HTR1DP28221 377 aa10.36□□□□□ -0.75
CPNE1-201ENST00000317677 TIGITQ495A1 244 aa10.36□□□□□ -0.75
CPNE1-201ENST00000317677 FOXI2Q6ZQN5 318 aa10.36□□□□□ -0.75
CPNE1-201ENST00000317677 OR4A5Q8NH83 315 aa10.36□□□□□ -0.75
CPNE1-201ENST00000317677 OR2T6Q8NHC8 308 aa10.36□□□□□ -0.75
CPNE1-201ENST00000317677 RPEQ96AT9 228 aa10.36□□□□□ -0.75
CPNE1-201ENST00000317677 JMJD8Q96S16 334 aa10.36□□□□□ -0.75
CPNE1-201ENST00000317677 SPATA25Q9BR10 227 aa10.36□□□□□ -0.75
CPNE1-201ENST00000317677 SIRPDQ9H106 197 aa10.36□□□□□ -0.75
CPNE1-201ENST00000317677 GTSF1LQ9H1H1 148 aa10.36□□□□□ -0.75
CPNE1-201ENST00000317677 CSMD1Q96PZ7 3565 aa10.36□□□□□ -0.75
CPNE1-201ENST00000317677 PDZD2O15018 2839 aa10.36□□□□□ -0.75
CPNE1-201ENST00000317677 A0A1W2PRD5 423 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 A0A1W2PRF3 423 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 A0A1W2PRM7 423 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 SPINK4O60575 86 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 SSBP2P81877 361 aaPredicted RBP10.35□□□□□ -0.75
CPNE1-201ENST00000317677 SMAGPQ0VAQ4 97 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 PSG5Q15238 335 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 CENPWQ5EE01 88 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 VMO1Q7Z5L0 202 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 STXBP6Q8NFX7 210 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 CFHR4Q92496 578 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 MGST2Q99735 147 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 ENY2Q9NPA8 101 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 AMMECR1Q9Y4X0 333 aaPredicted RBP10.35□□□□□ -0.75
CPNE1-201ENST00000317677 LSM4Q9Y4Z0 139 aaKnown RBP10.35□□□□□ -0.75
CPNE1-201ENST00000317677 FBN2P35556 2912 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 A0A0G2JLM5 398 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 GAGE12HA6NDE8 117 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 HOXB4P17483 251 aaPredicted RBP10.35□□□□□ -0.75
CPNE1-201ENST00000317677 KRTAP10-9P60411 292 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 WT1-ASQ06250 92 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 VMA21Q3ZAQ7 101 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 RNASEKQ6P5S7 137 aaKnown RBP10.35□□□□□ -0.75
CPNE1-201ENST00000317677 BPIFA4PQ86YQ2 179 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 DYNAPQ8N1N2 210 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 OR1L8Q8NGR8 309 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 TP73-AS1Q9UF72 201 aa10.35□□□□□ -0.75
CPNE1-201ENST00000317677 INS-IGF2F8WCM5 200 aa10.34□□□□□ -0.75
CPNE1-201ENST00000317677 TIMM23O14925 209 aa10.34□□□□□ -0.75
CPNE1-201ENST00000317677 HIST1H1EP10412 219 aaKnown RBP10.34□□□□□ -0.75
CPNE1-201ENST00000317677 MLANAQ16655 118 aa10.34□□□□□ -0.75
CPNE1-201ENST00000317677 C2orf83Q53S99 150 aa10.34□□□□□ -0.75
CPNE1-201ENST00000317677 C1orf122Q6ZSJ8 110 aa10.34□□□□□ -0.75
CPNE1-201ENST00000317677 FA2HQ7L5A8 372 aa10.34□□□□□ -0.75
CPNE1-201ENST00000317677 GRAMD2BQ96HH9 432 aa10.34□□□□□ -0.75
CPNE1-201ENST00000317677 URB1-AS1Q96HZ7 61 aa10.34□□□□□ -0.75
CPNE1-201ENST00000317677 CCL19Q99731 98 aa10.34□□□□□ -0.75
CPNE1-201ENST00000317677 GGTLC1Q9BX51 225 aa10.34□□□□□ -0.75
CPNE1-201ENST00000317677 A0A1W2PPM0 123 aa10.34□□□□□ -0.75
CPNE1-201ENST00000317677 J3QR89 54 aa10.34□□□□□ -0.75
CPNE1-201ENST00000317677 TEX45Q8NA69 505 aa10.34□□□□□ -0.75
CPNE1-201ENST00000317677 MRAP2Q96G30 205 aa10.34□□□□□ -0.75
CPNE1-201ENST00000317677 RNASE7Q9H1E1 156 aaKnown RBP10.34□□□□□ -0.75
CPNE1-201ENST00000317677 DPM3Q9P2X0 92 aa10.34□□□□□ -0.75
CPNE1-201ENST00000317677 SIGLEC9Q9Y336 463 aa10.34□□□□□ -0.75
CPNE1-201ENST00000317677 HILPDAQ9Y5L2 63 aa10.34□□□□□ -0.75
CPNE1-201ENST00000317677 WNK2Q9Y3S1 2297 aa10.33□□□□□ -0.76
CPNE1-201ENST00000317677 H3BUT2 72 aa10.33□□□□□ -0.76
CPNE1-201ENST00000317677 IGLV2-8P01709 118 aa10.33□□□□□ -0.76
CPNE1-201ENST00000317677 IBA57Q5T440 356 aaKnown RBP10.33□□□□□ -0.76
CPNE1-201ENST00000317677 PQLC2Q6ZP29 291 aa10.33□□□□□ -0.76
CPNE1-201ENST00000317677 FAM231DQ6ZW35 169 aa10.33□□□□□ -0.76
CPNE1-201ENST00000317677 NRGNQ92686 78 aa10.33□□□□□ -0.76
CPNE1-201ENST00000317677 IGKV1OR2-108A0A075B7D4 117 aa10.32□□□□□ -0.76
CPNE1-201ENST00000317677 SIVA1O15304 175 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms