RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 CAMPP49913 170 aa12.16□□□□□ -0.46
CGGBP1-201ENST00000309534 TRGC1P0CF51 173 aa12.16□□□□□ -0.46
CGGBP1-201ENST00000309534 KRTAP10-9P60411 292 aa12.16□□□□□ -0.46
CGGBP1-201ENST00000309534 RASL11AQ6T310 242 aa12.16□□□□□ -0.46
CGGBP1-201ENST00000309534 NUDT10Q8NFP7 164 aa12.16□□□□□ -0.46
CGGBP1-201ENST00000309534 NUDT11Q96G61 164 aa12.16□□□□□ -0.46
CGGBP1-201ENST00000309534 MRPL18Q9H0U6 180 aaKnown RBP12.16□□□□□ -0.46
CGGBP1-201ENST00000309534 DIRC3C9JPN6 131 aa12.15□□□□□ -0.46
CGGBP1-201ENST00000309534 EBLN2Q6P2I7 272 aa12.15□□□□□ -0.46
CGGBP1-201ENST00000309534 ASCL2Q99929 193 aa12.15□□□□□ -0.46
CGGBP1-201ENST00000309534 MUC3AQ02505 3323 aa12.15□□□□□ -0.46
CGGBP1-201ENST00000309534 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.15□□□□□ -0.46
CGGBP1-201ENST00000309534 CT83Q5H943 113 aa12.15□□□□□ -0.46
CGGBP1-201ENST00000309534 ZNF580Q9UK33 172 aa12.15□□□□□ -0.46
CGGBP1-201ENST00000309534 IGKV3-7A0A075B6H7 116 aa12.15□□□□□ -0.46
CGGBP1-201ENST00000309534 ATP5L2Q7Z4Y8 100 aa12.15□□□□□ -0.46
CGGBP1-201ENST00000309534 BCL6BQ8N143 479 aaPredicted RBP12.15□□□□□ -0.46
CGGBP1-201ENST00000309534 BRI3O95415 125 aa12.14□□□□□ -0.47
CGGBP1-201ENST00000309534 RBPMS2Q6ZRY4 209 aaKnown RBP12.14□□□□□ -0.47
CGGBP1-201ENST00000309534 TYMSP04818 313 aa12.14□□□□□ -0.47
CGGBP1-201ENST00000309534 SRD5A1P18405 259 aa12.14□□□□□ -0.47
CGGBP1-201ENST00000309534 S100A4P26447 101 aaKnown RBP12.14□□□□□ -0.47
CGGBP1-201ENST00000309534 LCN12Q6JVE5 192 aa12.14□□□□□ -0.47
CGGBP1-201ENST00000309534 MRPL53Q96EL3 112 aaKnown RBP12.14□□□□□ -0.47
CGGBP1-201ENST00000309534 HBBP68871 147 aa12.14□□□□□ -0.47
CGGBP1-201ENST00000309534 MYO15AQ9UKN7 3530 aa12.14□□□□□ -0.47
CGGBP1-201ENST00000309534 GNB1LQ9BYB4 327 aa12.13□□□□□ -0.47
CGGBP1-201ENST00000309534 LOC105371267A0A1B0GV96 52 aa12.13□□□□□ -0.47
CGGBP1-201ENST00000309534 ADMP35318 185 aa12.13□□□□□ -0.47
CGGBP1-201ENST00000309534 WFDC3Q8IUB2 231 aa12.13□□□□□ -0.47
CGGBP1-201ENST00000309534 NAV3Q8IVL0 2385 aa12.13□□□□□ -0.47
CGGBP1-201ENST00000309534 IGLC2P0DOY2 106 aa12.13□□□□□ -0.47
CGGBP1-201ENST00000309534 LINC00479Q96M42 142 aa12.13□□□□□ -0.47
CGGBP1-201ENST00000309534 RHPN1-AS1Q9BWJ2 59 aa12.13□□□□□ -0.47
CGGBP1-201ENST00000309534 KLF12Q9Y4X4 402 aa12.13□□□□□ -0.47
CGGBP1-201ENST00000309534 TRBV6-1A0A0K0K1D8 114 aa12.13□□□□□ -0.47
CGGBP1-201ENST00000309534 FABP5P3A8MUU1 101 aa12.13□□□□□ -0.47
CGGBP1-201ENST00000309534 SRSF1Q07955 248 aaKnown RBP eCLIP12.13□□□□□ -0.47
CGGBP1-201ENST00000309534 FAM231BA6NCW3 169 aa12.12□□□□□ -0.47
CGGBP1-201ENST00000309534 LINC01548A6NM66 108 aa12.12□□□□□ -0.47
CGGBP1-201ENST00000309534 CCDC140Q96MF4 163 aa12.12□□□□□ -0.47
CGGBP1-201ENST00000309534 GFRA4Q9GZZ7 299 aa12.12□□□□□ -0.47
CGGBP1-201ENST00000309534 NAV2Q8IVL1 2488 aa12.12□□□□□ -0.47
CGGBP1-201ENST00000309534 PGLYRP4Q96LB8 373 aa12.12□□□□□ -0.47
CGGBP1-201ENST00000309534 BUB3O43684 328 aa12.12□□□□□ -0.47
CGGBP1-201ENST00000309534 AVPP01185 164 aa12.12□□□□□ -0.47
CGGBP1-201ENST00000309534 LTAP01374 205 aa12.12□□□□□ -0.47
CGGBP1-201ENST00000309534 IGHG4P01861 327 aa12.12□□□□□ -0.47
CGGBP1-201ENST00000309534 PDZD11Q5EBL8 140 aa12.12□□□□□ -0.47
CGGBP1-201ENST00000309534 TCF24Q7RTU0 167 aa12.12□□□□□ -0.47
CGGBP1-201ENST00000309534 TSPOP30536 169 aa12.11□□□□□ -0.47
CGGBP1-201ENST00000309534 IGF2BP2-AS1Q96M15 143 aa12.11□□□□□ -0.47
CGGBP1-201ENST00000309534 A0A087X0K7 114 aa12.11□□□□□ -0.47
CGGBP1-201ENST00000309534 HIGD1CA8MV81 97 aa12.11□□□□□ -0.47
CGGBP1-201ENST00000309534 M0R3E3 92 aa12.11□□□□□ -0.47
CGGBP1-201ENST00000309534 CD5LO43866 347 aa12.11□□□□□ -0.47
CGGBP1-201ENST00000309534 CDX1P47902 265 aaPredicted RBP12.11□□□□□ -0.47
CGGBP1-201ENST00000309534 WFDC11Q8NEX6 87 aa12.11□□□□□ -0.47
CGGBP1-201ENST00000309534 NRN1Q9NPD7 142 aa12.11□□□□□ -0.47
CGGBP1-201ENST00000309534 V9GYV3 84 aa12.11□□□□□ -0.47
CGGBP1-201ENST00000309534 LGALS1P09382 135 aaKnown RBP12.11□□□□□ -0.47
CGGBP1-201ENST00000309534 PIFOQ8TCI5 191 aa12.11□□□□□ -0.47
CGGBP1-201ENST00000309534 LINC00477Q96M19 166 aa12.11□□□□□ -0.47
CGGBP1-201ENST00000309534 PYGO2Q9BRQ0 406 aa12.11□□□□□ -0.47
CGGBP1-201ENST00000309534 IGKV2-40A0A087WW87 121 aaPredicted RBP12.1□□□□□ -0.47
CGGBP1-201ENST00000309534 IGHV7-4-1A0A0J9YVY3 117 aa12.1□□□□□ -0.47
CGGBP1-201ENST00000309534 IGKV2D-40P01614 121 aaPredicted RBP12.1□□□□□ -0.47
CGGBP1-201ENST00000309534 HIST1H1AQ02539 215 aaPredicted RBP12.1□□□□□ -0.47
CGGBP1-201ENST00000309534 A0A1B0GUT8 65 aa12.1□□□□□ -0.47
CGGBP1-201ENST00000309534 K7EMT4 169 aa12.1□□□□□ -0.47
CGGBP1-201ENST00000309534 CBLN1P23435 193 aa12.1□□□□□ -0.47
CGGBP1-201ENST00000309534 ZNF138P52744 262 aa12.1□□□□□ -0.47
CGGBP1-201ENST00000309534 RBAKDNA6NC62 111 aa12.1□□□□□ -0.47
CGGBP1-201ENST00000309534 DUX5Q96PT3 197 aa12.1□□□□□ -0.47
CGGBP1-201ENST00000309534 K7EN84 100 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 NEU1Q99519 415 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 ZFYVE26Q68DK2 2539 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 TMSB15BA0A087X1C1 80 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 TRAV8-1A0A0A6YYK1 113 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 SMIM6P0DI80 62 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 FABP4P15090 132 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 PSMG3-AS1Q96PY0 264 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 CREBBPQ92793 2442 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 ACTL10Q5JWF8 245 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 C16orf54Q6UWD8 224 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 C8orf86Q6ZUL3 223 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 UBE2E2Q96LR5 201 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 TRBV20OR9-2A0A075B6H5 130 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 HIST1H2BKO60814 126 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 HSBP1O75506 76 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 HIST1H2BJP06899 126 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 HIST1H2BOP23527 126 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 HIST1H2BBP33778 126 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 HIST1H2BDP58876 126 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 HIST1H2BCP62807 126 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 HIST2H2BEQ16778 126 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 HIST1H2BHQ93079 126 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 HIST1H2BNQ99877 126 aa12.09□□□□□ -0.47
CGGBP1-201ENST00000309534 HIST1H2BMQ99879 126 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms