RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 THAP8Q8NA92 274 aa3.29□□□□□ -1.88
USH2A-201ENST00000307340 LIME1Q9H400 295 aa3.29□□□□□ -1.88
USH2A-201ENST00000307340 A0A1B0GW54 56 aa3.29□□□□□ -1.88
USH2A-201ENST00000307340 CGAP01215 116 aa3.29□□□□□ -1.88
USH2A-201ENST00000307340 LDLRAD2Q5SZI1 272 aa3.29□□□□□ -1.88
USH2A-201ENST00000307340 CKS1BP61024 79 aa3.29□□□□□ -1.88
USH2A-201ENST00000307340 LAIR2Q6ISS4 152 aa3.29□□□□□ -1.88
USH2A-201ENST00000307340 NDUFA4L2Q9NRX3 87 aa3.29□□□□□ -1.88
USH2A-201ENST00000307340 A0A1W2PRF3 423 aa3.29□□□□□ -1.88
USH2A-201ENST00000307340 A0A1W2PRM7 423 aa3.29□□□□□ -1.88
USH2A-201ENST00000307340 DCTN5Q9BTE1 182 aa3.29□□□□□ -1.88
USH2A-201ENST00000307340 DEFB108AA8MXU0 73 aa3.29□□□□□ -1.88
USH2A-201ENST00000307340 ATP5J2P56134 94 aa3.29□□□□□ -1.88
USH2A-201ENST00000307340 LOC105371267A0A1B0GV96 52 aa3.29□□□□□ -1.88
USH2A-201ENST00000307340 GGNQ86UU5 652 aa3.29□□□□□ -1.88
USH2A-201ENST00000307340 STHQ8IWL8 128 aa3.29□□□□□ -1.88
USH2A-201ENST00000307340 PIFOQ8TCI5 191 aa3.29□□□□□ -1.88
USH2A-201ENST00000307340 C5orf63A6NC05 138 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 FBXL19-AS1Q494R0 122 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 MESP1Q9BRJ9 268 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 I3L3M4 83 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 TRGV3P03979 118 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 COX8AP10176 69 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 TRAV2A0A0B4J234 112 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 K7EP13 123 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 TRAV12-1A0A0B4J245 112 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 SERF1AO75920 110 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 Q5BKY6 102 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 F8WDY8 70 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 SS18Q15532 418 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 MRPL55Q7Z7F7 128 aaKnown RBP3.28□□□□□ -1.88
USH2A-201ENST00000307340 PLA2G2FQ9BZM2 168 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 PGPEP1Q9NXJ5 209 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 NXPH3O95157 252 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 IGHV1-2P23083 117 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 HS3ST6Q96QI5 342 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 DEFB108BQ8NET1 73 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 STPG4Q8N801 248 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 ITLN1Q8WWA0 313 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 WIPF3A6NGB9 483 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 MEIG1Q5JSS6 88 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 NUP35Q8NFH5 326 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 PLPPR2Q96GM1 343 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 SIGLEC9Q9Y336 463 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 COL4A3Q01955 1670 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 CBLN1P23435 193 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 RPS27P42677 84 aaKnown RBP3.28□□□□□ -1.88
USH2A-201ENST00000307340 CDKN1BP46527 198 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 ZAR1Q86SH2 424 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 IL17DQ8TAD2 202 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 SHANK2-AS3Q9BTD1 123 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 PPDPFLQ8WWR9 84 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 H3BMG7 143 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 MDS2Q8NDY4 140 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 H0YJW9 148 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 C20orf173Q96LM9 149 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 PRR14LQ5THK1 2151 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 SSC4DQ8WTU2 575 aa3.28□□□□□ -1.88
USH2A-201ENST00000307340 PRSS8Q16651 343 aa3.28□□□□□ -1.89
USH2A-201ENST00000307340 RASL10AQ92737 203 aa3.28□□□□□ -1.89
USH2A-201ENST00000307340 KIR2DL5BA0A0G2JN68 375 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 KIR2DL5BA0A0G2JPC4 375 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 SOCS3O14543 225 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 KIR2DL5AQ8N109 375 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 LINC01356Q8N9X3 169 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 LTAP01374 205 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 ECSCRQ19T08 205 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 KRTAP27-1Q3LI81 207 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 IGHV1-3A0A0C4DH29 117 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 IGKV1-9A0A0C4DH69 117 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 A0A0J9YXY3 114 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 TRBV10-1A0A0K0K1A3 114 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 A0A1W2PRD5 423 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 FOXA3P55318 350 aaPredicted RBP3.27□□□□□ -1.89
USH2A-201ENST00000307340 PGLYRP4Q96LB8 373 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 IGKV1D-33P01593 117 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 IGKV1-33P01594 117 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 FAM104BQ5XKR9 115 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 IGFL2Q6UWQ7 119 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 CCL13Q99616 98 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 SRXN1Q9BYN0 137 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 REG4Q9BYZ8 158 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 WNK1Q9H4A3 2382 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 A0A0U1RQS6 177 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 CTAG1AP78358 180 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 FDCSPQ8NFU4 85 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 VGLL1Q99990 258 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 PSG8Q9UQ74 426 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 ELANEP08246 267 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 FAM110DQ8TAY7 271 aaPredicted RBP3.27□□□□□ -1.89
USH2A-201ENST00000307340 V9GYY9 64 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 NBASA2RRP1 2371 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 A0A087WX48 190 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 ZNF580Q9UK33 172 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 DUX5Q96PT3 197 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 HRKO00198 91 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 LHBP01229 141 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 WNT10AQ9GZT5 417 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 PSG1P11464 419 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 SPEM2Q0P670 501 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms