RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 AJUBAQ96IF1 538 aa4.25□□□□□ -1.73
VPS50-202ENST00000305866 HARBI1Q96MB7 349 aa4.25□□□□□ -1.73
VPS50-202ENST00000305866 TMEM238C9JI98 176 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 K7EP34 96 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 OR5AL1P0C617 328 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 HLA-DRB4P13762 266 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 FHL3Q13643 280 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 BATFQ16520 125 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 LGALS9BQ3B8N2 356 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 VMA21Q3ZAQ7 101 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 KLF17Q5JT82 389 aaPredicted RBP4.24□□□□□ -1.73
VPS50-202ENST00000305866 LGALS9CQ6DKI2 356 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 ZNF562Q6V9R5 426 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 TXN2Q99757 166 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 SIGLEC8Q9NYZ4 499 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 HLA-DRB4X5D2U9 266 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 ZNF292O60281 2723 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 TRAV8-1A0A0A6YYK1 113 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 IGHV1-3A0A0C4DH29 117 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 K7EIM0 57 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 K7ENP7 123 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 FAM180AQ6UWF9 173 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 LYPD2Q6UXB3 125 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 TTC9CQ8N5M4 171 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 NPIPB3Q92617 1050 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 SHANK2-AS3Q9BTD1 123 aa4.24□□□□□ -1.73
VPS50-202ENST00000305866 TRBV19A0A075B6N1 114 aa4.23□□□□□ -1.73
VPS50-202ENST00000305866 NDUFB3O43676 98 aa4.23□□□□□ -1.73
VPS50-202ENST00000305866 HIST1H1EP10412 219 aaKnown RBP4.23□□□□□ -1.73
VPS50-202ENST00000305866 ZNF80P51504 273 aaPredicted RBP4.23□□□□□ -1.73
VPS50-202ENST00000305866 UBE2L3P68036 154 aaKnown RBP4.23□□□□□ -1.73
VPS50-202ENST00000305866 LTC4SQ16873 150 aa4.23□□□□□ -1.73
VPS50-202ENST00000305866 Q6AWC8 147 aa4.23□□□□□ -1.73
VPS50-202ENST00000305866 FER1L6-AS1Q8NA97 138 aa4.23□□□□□ -1.73
VPS50-202ENST00000305866 Q9H3A6 140 aa4.23□□□□□ -1.73
VPS50-202ENST00000305866 PGPA6NDG6 321 aa4.23□□□□□ -1.73
VPS50-202ENST00000305866 DTX2Q86UW9 622 aa4.23□□□□□ -1.73
VPS50-202ENST00000305866 ZNF580Q9UK33 172 aa4.23□□□□□ -1.73
VPS50-202ENST00000305866 RALYQ9UKM9 306 aaKnown RBP4.23□□□□□ -1.73
VPS50-202ENST00000305866 SVILO95425 2214 aa4.23□□□□□ -1.73
VPS50-202ENST00000305866 IGLV11-55A0A075B6I3 123 aa4.23□□□□□ -1.73
VPS50-202ENST00000305866 GPR183P32249 361 aa4.23□□□□□ -1.73
VPS50-202ENST00000305866 OR1N2Q8NGR9 330 aa4.23□□□□□ -1.73
VPS50-202ENST00000305866 HIGD1BQ9P298 99 aa4.23□□□□□ -1.73
VPS50-202ENST00000305866 LIPFP07098 398 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 SLC25A34Q6PIV7 304 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 SGK494Q96LW2 274 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 TM2D2Q9BX73 214 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 ZGRF1Q86YA3 2104 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 RBAKDNA6NC62 111 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 IGHV3-48P01763 117 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 EGR2P11161 476 aaPredicted RBP4.22□□□□□ -1.73
VPS50-202ENST00000305866 CCL3L1P16619 93 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 IFI27P40305 119 aaPredicted RBP4.22□□□□□ -1.73
VPS50-202ENST00000305866 SMCPP49901 116 aaPredicted RBP4.22□□□□□ -1.73
VPS50-202ENST00000305866 ODF1Q14990 250 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 PSG3Q16557 428 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 ALKBH2Q6NS38 261 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 RNASEKQ6P5S7 137 aaKnown RBP4.22□□□□□ -1.73
VPS50-202ENST00000305866 PGLYRP4Q96LB8 373 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 C8orf49Q96NF6 230 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 ASCL2Q99929 193 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 NGBQ9NPG2 151 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 EIF4EBP3O60516 100 aaPredicted RBP4.22□□□□□ -1.73
VPS50-202ENST00000305866 LEPROTL1O95214 131 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 GOSR1O95249 250 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 PLAUP00749 431 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 NTF3P20783 257 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 SEC11AP67812 179 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 PCP2Q8IVA1 136 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 EXOC3-AS1Q8N2X6 119 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 SPATA25Q9BR10 227 aa4.22□□□□□ -1.73
VPS50-202ENST00000305866 SLC25A39Q9BZJ4 359 aaPredicted RBP4.22□□□□□ -1.73
VPS50-202ENST00000305866 ZNF318Q5VUA4 2279 aa4.21□□□□□ -1.73
VPS50-202ENST00000305866 LINC01619G3V211 115 aa4.21□□□□□ -1.73
VPS50-202ENST00000305866 SNAI2O43623 268 aa4.21□□□□□ -1.73
VPS50-202ENST00000305866 COL8A1P27658 744 aa4.21□□□□□ -1.73
VPS50-202ENST00000305866 TMEM97Q5BJF2 176 aa4.21□□□□□ -1.73
VPS50-202ENST00000305866 MINOS1Q5TGZ0 78 aa4.21□□□□□ -1.73
VPS50-202ENST00000305866 PPP1R27Q86WC6 154 aa4.21□□□□□ -1.73
VPS50-202ENST00000305866 ZNF491Q8N8L2 437 aa4.21□□□□□ -1.73
VPS50-202ENST00000305866 NRACQ8N912 160 aa4.21□□□□□ -1.73
VPS50-202ENST00000305866 BORCS7Q96B45 105 aa4.21□□□□□ -1.73
VPS50-202ENST00000305866 MRPL53Q96EL3 112 aaKnown RBP4.21□□□□□ -1.73
VPS50-202ENST00000305866 RAB1BQ9H0U4 201 aa4.21□□□□□ -1.73
VPS50-202ENST00000305866 ZNF331Q9NQX6 463 aaPredicted RBP4.21□□□□□ -1.73
VPS50-202ENST00000305866 MINOS1-NBL1R4GNA1 71 aa4.21□□□□□ -1.73
VPS50-202ENST00000305866 A0A1W2PPM0 123 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 C7orf71A4D174 169 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 PRSS29PA6NIE9 313 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 E9PLD3 99 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 PRRG2O14669 202 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 COX7A2P2O60397 106 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 NDUFS7O75251 213 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 MGST1P10620 155 aaKnown RBP4.21□□□□□ -1.74
VPS50-202ENST00000305866 RPL27AP46776 148 aaKnown RBP4.21□□□□□ -1.74
VPS50-202ENST00000305866 FAM104BQ5XKR9 115 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 POM121L12Q8N7R1 296 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 RND1Q92730 232 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 LINC01600Q96MT4 127 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms