RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 FLNCQ14315 2725 aa15.03■□□□□ -0
HOXC4-201ENST00000303406 A8MWL6 223 aa15.03■□□□□ -0
HOXC4-201ENST00000303406 BUB3O43684 328 aa15.03■□□□□ -0
HOXC4-201ENST00000303406 HLA-DQA1P01909 254 aa15.03■□□□□ -0
HOXC4-201ENST00000303406 TRGV3P03979 118 aa15.03■□□□□ -0
HOXC4-201ENST00000303406 DNLZQ5SXM8 178 aa15.03■□□□□ -0
HOXC4-201ENST00000303406 C16orf54Q6UWD8 224 aa15.03■□□□□ -0
HOXC4-201ENST00000303406 DAZAP1Q96EP5 407 aaKnown RBP15.03■□□□□ -0
HOXC4-201ENST00000303406 SGK494Q96LW2 274 aa15.03■□□□□ -0
HOXC4-201ENST00000303406 SMAD5-AS1Q9Y6J3 95 aa15.03■□□□□ -0
HOXC4-201ENST00000303406 U3KQE9 123 aa15.03■□□□□ -0
HOXC4-201ENST00000303406 SPTAN1Q13813 2472 aaKnown RBP15.03■□□□□ -0
HOXC4-201ENST00000303406 FSHBP01225 129 aa15.02■□□□□ -0
HOXC4-201ENST00000303406 P01737 135 aa15.02■□□□□ -0
HOXC4-201ENST00000303406 TCL1AP56279 114 aa15.02■□□□□ -0
HOXC4-201ENST00000303406 PRSS57Q6UWY2 283 aa15.02■□□□□ -0
HOXC4-201ENST00000303406 C9orf139Q6ZV77 190 aa15.02■□□□□ -0
HOXC4-201ENST00000303406 PRNTQ86SH4 94 aa15.02■□□□□ -0
HOXC4-201ENST00000303406 HIST1H2BLQ99880 126 aa15.02■□□□□ -0
HOXC4-201ENST00000303406 GNB4Q9HAV0 340 aa15.02■□□□□ -0
HOXC4-201ENST00000303406 CLPSL1A2RUU4 121 aa15.02□□□□□ -0.01
HOXC4-201ENST00000303406 COX8CQ7Z4L0 72 aa15.02□□□□□ -0.01
HOXC4-201ENST00000303406 NUP35Q8NFH5 326 aa15.02□□□□□ -0.01
HOXC4-201ENST00000303406 OR5R1Q8NH85 324 aa15.02□□□□□ -0.01
HOXC4-201ENST00000303406 METTL26Q96S19 204 aa15.02□□□□□ -0.01
HOXC4-201ENST00000303406 ZNF331Q9NQX6 463 aaPredicted RBP15.02□□□□□ -0.01
HOXC4-201ENST00000303406 TRAV8-1A0A0A6YYK1 113 aa15.01□□□□□ -0.01
HOXC4-201ENST00000303406 CA1P00915 261 aaPredicted RBP15.01□□□□□ -0.01
HOXC4-201ENST00000303406 TGFAP01135 160 aa15.01□□□□□ -0.01
HOXC4-201ENST00000303406 IGHV4-31P0DP07 118 aa15.01□□□□□ -0.01
HOXC4-201ENST00000303406 KRTAP10-9P60411 292 aa15.01□□□□□ -0.01
HOXC4-201ENST00000303406 S100A12P80511 92 aa15.01□□□□□ -0.01
HOXC4-201ENST00000303406 LINC00322Q6ZN03 302 aaPredicted RBP15.01□□□□□ -0.01
HOXC4-201ENST00000303406 GBGT1Q8N5D6 347 aa15.01□□□□□ -0.01
HOXC4-201ENST00000303406 OR10D4PQ8NGN7 298 aa15.01□□□□□ -0.01
HOXC4-201ENST00000303406 NEU1Q99519 415 aa15.01□□□□□ -0.01
HOXC4-201ENST00000303406 IGLV1-40P01703 118 aa15□□□□□ -0.01
HOXC4-201ENST00000303406 FABP4P15090 132 aa15□□□□□ -0.01
HOXC4-201ENST00000303406 TPPP2P59282 170 aa15□□□□□ -0.01
HOXC4-201ENST00000303406 CFHR3Q02985 330 aa15□□□□□ -0.01
HOXC4-201ENST00000303406 Q0VG73 95 aa15□□□□□ -0.01
HOXC4-201ENST00000303406 SLC50A1Q9BRV3 221 aa15□□□□□ -0.01
HOXC4-201ENST00000303406 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.99□□□□□ -0.01
HOXC4-201ENST00000303406 RNF223E7ERA6 249 aa14.99□□□□□ -0.01
HOXC4-201ENST00000303406 M0R3E3 92 aa14.99□□□□□ -0.01
HOXC4-201ENST00000303406 DEFB112Q30KQ8 113 aa14.99□□□□□ -0.01
HOXC4-201ENST00000303406 PDZD11Q5EBL8 140 aa14.99□□□□□ -0.01
HOXC4-201ENST00000303406 CIARTQ8N365 385 aaPredicted RBP14.99□□□□□ -0.01
HOXC4-201ENST00000303406 PACRGQ96M98 296 aaPredicted RBP14.99□□□□□ -0.01
HOXC4-201ENST00000303406 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.99□□□□□ -0.01
HOXC4-201ENST00000303406 MYO18BQ8IUG5 2567 aa14.99□□□□□ -0.01
HOXC4-201ENST00000303406 HIGD1CA8MV81 97 aa14.98□□□□□ -0.01
HOXC4-201ENST00000303406 NDUFA4O00483 81 aa14.98□□□□□ -0.01
HOXC4-201ENST00000303406 AMBPP02760 352 aa14.98□□□□□ -0.01
HOXC4-201ENST00000303406 ESDP10768 282 aa14.98□□□□□ -0.01
HOXC4-201ENST00000303406 COL8A1P27658 744 aa14.98□□□□□ -0.01
HOXC4-201ENST00000303406 ARL3P36405 182 aa14.98□□□□□ -0.01
HOXC4-201ENST00000303406 FAM209BQ5JX69 171 aa14.98□□□□□ -0.01
HOXC4-201ENST00000303406 Q5PR19 223 aa14.98□□□□□ -0.01
HOXC4-201ENST00000303406 MRPL54Q6P161 138 aaKnown RBP14.98□□□□□ -0.01
HOXC4-201ENST00000303406 TMEM18Q96B42 140 aa14.98□□□□□ -0.01
HOXC4-201ENST00000303406 LINC00527Q9UJ94 153 aa14.98□□□□□ -0.01
HOXC4-201ENST00000303406 A0A0G2JLM5 398 aa14.97□□□□□ -0.01
HOXC4-201ENST00000303406 A0A1B0GXF2 115 aa14.97□□□□□ -0.01
HOXC4-201ENST00000303406 TMEM89A2RUT3 159 aa14.97□□□□□ -0.01
HOXC4-201ENST00000303406 FRMD6-AS1P0C7T7 363 aa14.97□□□□□ -0.01
HOXC4-201ENST00000303406 CRISP2P16562 243 aa14.97□□□□□ -0.01
HOXC4-201ENST00000303406 FOXA3P55318 350 aaPredicted RBP14.97□□□□□ -0.01
HOXC4-201ENST00000303406 BLCAPP62952 87 aa14.97□□□□□ -0.01
HOXC4-201ENST00000303406 SAPCD1Q5SSQ6 148 aa14.97□□□□□ -0.01
HOXC4-201ENST00000303406 MRPL53Q96EL3 112 aaKnown RBP14.97□□□□□ -0.01
HOXC4-201ENST00000303406 CLEC5AQ9NY25 188 aa14.97□□□□□ -0.01
HOXC4-201ENST00000303406 IGHV3-35A0A0C4DH35 117 aa14.97□□□□□ -0.01
HOXC4-201ENST00000303406 ZNF785A8K8V0 405 aa14.97□□□□□ -0.01
HOXC4-201ENST00000303406 CHEK1O14757 476 aa14.97□□□□□ -0.01
HOXC4-201ENST00000303406 PYY3Q5JQD4 70 aa14.97□□□□□ -0.01
HOXC4-201ENST00000303406 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.97□□□□□ -0.01
HOXC4-201ENST00000303406 ZC2HC1AQ96GY0 325 aa14.97□□□□□ -0.01
HOXC4-201ENST00000303406 RBAKDNA6NC62 111 aa14.96□□□□□ -0.02
HOXC4-201ENST00000303406 SPINK4O60575 86 aa14.96□□□□□ -0.02
HOXC4-201ENST00000303406 SLC35B1P78383 322 aa14.96□□□□□ -0.02
HOXC4-201ENST00000303406 OR10J3Q5JRS4 329 aa14.96□□□□□ -0.02
HOXC4-201ENST00000303406 RBPMS2Q6ZRY4 209 aaKnown RBP14.96□□□□□ -0.02
HOXC4-201ENST00000303406 NIT2Q9NQR4 276 aa14.96□□□□□ -0.02
HOXC4-201ENST00000303406 COL12A1Q99715 3063 aa14.95□□□□□ -0.02
HOXC4-201ENST00000303406 ZFYVE26Q68DK2 2539 aa14.95□□□□□ -0.02
HOXC4-201ENST00000303406 IGHG4P01861 327 aa14.95□□□□□ -0.02
HOXC4-201ENST00000303406 NOL4LQ96MY1 436 aaPredicted RBP14.95□□□□□ -0.02
HOXC4-201ENST00000303406 IGHV4-59P01825 116 aa14.94□□□□□ -0.02
HOXC4-201ENST00000303406 APCSP02743 223 aa14.94□□□□□ -0.02
HOXC4-201ENST00000303406 CT45A10P0DMU9 189 aa14.94□□□□□ -0.02
HOXC4-201ENST00000303406 GTSF1Q8WW33 167 aa14.94□□□□□ -0.02
HOXC4-201ENST00000303406 PRDM13Q9H4Q3 707 aa14.94□□□□□ -0.02
HOXC4-201ENST00000303406 IGHV3OR16-8A0A075B7F1 116 aa14.93□□□□□ -0.02
HOXC4-201ENST00000303406 PF4V1P10720 104 aa14.93□□□□□ -0.02
HOXC4-201ENST00000303406 RAB4BP61018 213 aa14.93□□□□□ -0.02
HOXC4-201ENST00000303406 HBBP68871 147 aa14.93□□□□□ -0.02
HOXC4-201ENST00000303406 Q6AWC8 147 aa14.93□□□□□ -0.02
HOXC4-201ENST00000303406 LCN12Q6JVE5 192 aa14.93□□□□□ -0.02
HOXC4-201ENST00000303406 Q6YL49 198 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms