RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 HAX1O00165 279 aa9.29□□□□□ -0.92
GCN1-201ENST00000300648 C7orf69Q9H7B7 122 aa9.29□□□□□ -0.92
GCN1-201ENST00000300648 DENND4AQ7Z401 1863 aa9.29□□□□□ -0.92
GCN1-201ENST00000300648 IGHV3-35A0A0C4DH35 117 aa9.29□□□□□ -0.92
GCN1-201ENST00000300648 C9JAW5 83 aa9.29□□□□□ -0.92
GCN1-201ENST00000300648 C6orf226Q5I0X4 101 aa9.29□□□□□ -0.92
GCN1-201ENST00000300648 IGHV3-66A0A0C4DH42 116 aa9.29□□□□□ -0.92
GCN1-201ENST00000300648 SLAQ13239 276 aa9.29□□□□□ -0.92
GCN1-201ENST00000300648 ANAPC10Q9UM13 185 aa9.29□□□□□ -0.92
GCN1-201ENST00000300648 DEPPQ9NTK1 212 aa9.28□□□□□ -0.92
GCN1-201ENST00000300648 TANC1Q9C0D5 1861 aa9.28□□□□□ -0.92
GCN1-201ENST00000300648 MED13Q9UHV7 2174 aa9.28□□□□□ -0.92
GCN1-201ENST00000300648 IGHV3-49A0A0A0MS15 119 aa9.28□□□□□ -0.92
GCN1-201ENST00000300648 K7EP34 96 aa9.28□□□□□ -0.92
GCN1-201ENST00000300648 GATA2P23769 480 aaPredicted RBP9.28□□□□□ -0.92
GCN1-201ENST00000300648 HLA-DMBP28068 263 aa9.28□□□□□ -0.92
GCN1-201ENST00000300648 IGKV1-9A0A0C4DH69 117 aa9.28□□□□□ -0.92
GCN1-201ENST00000300648 PRIMA1Q86XR5 153 aa9.28□□□□□ -0.92
GCN1-201ENST00000300648 TRAV13-2A0A0B4J235 113 aa9.28□□□□□ -0.92
GCN1-201ENST00000300648 PMS2P5A8MQ11 134 aa9.28□□□□□ -0.92
GCN1-201ENST00000300648 TICRRQ7Z2Z1 1910 aa9.28□□□□□ -0.92
GCN1-201ENST00000300648 CD55P08174 381 aa9.28□□□□□ -0.92
GCN1-201ENST00000300648 PAQR4Q8N4S7 273 aaPredicted RBP9.28□□□□□ -0.92
GCN1-201ENST00000300648 CSTL1Q9H114 145 aa9.28□□□□□ -0.92
GCN1-201ENST00000300648 CRIM1Q9NZV1 1036 aa9.28□□□□□ -0.92
GCN1-201ENST00000300648 EML5Q05BV3 1969 aa9.28□□□□□ -0.92
GCN1-201ENST00000300648 TMEM158Q8WZ71 300 aa9.27□□□□□ -0.92
GCN1-201ENST00000300648 CRYGSP22914 178 aa9.27□□□□□ -0.93
GCN1-201ENST00000300648 GAGE5Q13069 117 aa9.27□□□□□ -0.93
GCN1-201ENST00000300648 GAGE6Q13070 117 aa9.27□□□□□ -0.93
GCN1-201ENST00000300648 NCOA6Q14686 2063 aaPredicted RBP9.27□□□□□ -0.93
GCN1-201ENST00000300648 PRSS46E5RG02 174 aa9.27□□□□□ -0.93
GCN1-201ENST00000300648 SH2D1AO60880 128 aa9.27□□□□□ -0.93
GCN1-201ENST00000300648 FCN3O75636 299 aa9.27□□□□□ -0.93
GCN1-201ENST00000300648 ZNF664Q8N3J9 261 aa9.27□□□□□ -0.93
GCN1-201ENST00000300648 TRAV8-3A0A0A6YYJ7 113 aa9.27□□□□□ -0.93
GCN1-201ENST00000300648 IGHV3-23P01764 117 aa9.27□□□□□ -0.93
GCN1-201ENST00000300648 Q86TA4 180 aa9.27□□□□□ -0.93
GCN1-201ENST00000300648 SRRM4A7MD48 611 aaKnown RBP9.27□□□□□ -0.93
GCN1-201ENST00000300648 PCDH15Q96QU1 1955 aa9.27□□□□□ -0.93
GCN1-201ENST00000300648 FAM231DQ6ZW35 169 aa9.27□□□□□ -0.93
GCN1-201ENST00000300648 GATA3P23771 443 aa9.27□□□□□ -0.93
GCN1-201ENST00000300648 IGKV3D-20A0A0C4DH25 116 aa9.26□□□□□ -0.93
GCN1-201ENST00000300648 PATE3B3GLJ2 98 aa9.26□□□□□ -0.93
GCN1-201ENST00000300648 ZNF876PQ49A33 203 aa9.26□□□□□ -0.93
GCN1-201ENST00000300648 SNHG12Q9BXW3 62 aa9.26□□□□□ -0.93
GCN1-201ENST00000300648 LIME1Q9H400 295 aa9.26□□□□□ -0.93
GCN1-201ENST00000300648 IGHV2-26A0A0B4J1V2 119 aa9.26□□□□□ -0.93
GCN1-201ENST00000300648 GAGE12JA6NER3 117 aa9.26□□□□□ -0.93
GCN1-201ENST00000300648 GAGE7O76087 117 aa9.26□□□□□ -0.93
GCN1-201ENST00000300648 GAGE12FP0CL80 117 aa9.26□□□□□ -0.93
GCN1-201ENST00000300648 GAGE12GP0CL81 117 aa9.26□□□□□ -0.93
GCN1-201ENST00000300648 GAGE12IP0CL82 117 aa9.26□□□□□ -0.93
GCN1-201ENST00000300648 GAGE4Q13068 117 aa9.26□□□□□ -0.93
GCN1-201ENST00000300648 COX8AP10176 69 aa9.26□□□□□ -0.93
GCN1-201ENST00000300648 hDV102S1A0JD36 115 aa9.26□□□□□ -0.93
GCN1-201ENST00000300648 C3orf36Q3SXR2 165 aa9.26□□□□□ -0.93
GCN1-201ENST00000300648 COLQQ9Y215 455 aaPredicted RBP9.26□□□□□ -0.93
GCN1-201ENST00000300648 DSCR8Q96T75 97 aa9.25□□□□□ -0.93
GCN1-201ENST00000300648 ZNF319Q9P2F9 582 aa9.25□□□□□ -0.93
GCN1-201ENST00000300648 THBDP07204 575 aa9.25□□□□□ -0.93
GCN1-201ENST00000300648 DENND4CQ5VZ89 1909 aa9.25□□□□□ -0.93
GCN1-201ENST00000300648 J3KT08 172 aa9.25□□□□□ -0.93
GCN1-201ENST00000300648 RFPL3SP0C7P2 107 aa9.25□□□□□ -0.93
GCN1-201ENST00000300648 ZNF329Q86UD4 541 aa9.25□□□□□ -0.93
GCN1-201ENST00000300648 SIGLEC12Q96PQ1 595 aa9.25□□□□□ -0.93
GCN1-201ENST00000300648 K7EP13 123 aa9.25□□□□□ -0.93
GCN1-201ENST00000300648 HGFACQ04756 655 aa9.25□□□□□ -0.93
GCN1-201ENST00000300648 LGALS9BQ3B8N2 356 aa9.25□□□□□ -0.93
GCN1-201ENST00000300648 LGALS9CQ6DKI2 356 aa9.25□□□□□ -0.93
GCN1-201ENST00000300648 FDCSPQ8NFU4 85 aa9.25□□□□□ -0.93
GCN1-201ENST00000300648 LSM4Q9Y4Z0 139 aaKnown RBP9.25□□□□□ -0.93
GCN1-201ENST00000300648 SLC25A16P16260 332 aa9.25□□□□□ -0.93
GCN1-201ENST00000300648 SORL1Q92673 2214 aa9.25□□□□□ -0.93
GCN1-201ENST00000300648 TMEM256Q8N2U0 113 aa9.25□□□□□ -0.93
GCN1-201ENST00000300648 Q8N8P6 123 aa9.25□□□□□ -0.93
GCN1-201ENST00000300648 IGKV1D-43A0A0B4J1Z2 117 aa9.24□□□□□ -0.93
GCN1-201ENST00000300648 LCN12Q6JVE5 192 aa9.24□□□□□ -0.93
GCN1-201ENST00000300648 TIMM23O14925 209 aa9.24□□□□□ -0.93
GCN1-201ENST00000300648 IGHV1-8P0DP01 117 aa9.24□□□□□ -0.93
GCN1-201ENST00000300648 CDKN1BP46527 198 aa9.24□□□□□ -0.93
GCN1-201ENST00000300648 C5orf64Q2M2E5 130 aa9.24□□□□□ -0.93
GCN1-201ENST00000300648 DAZ1Q9NQZ3 744 aaKnown RBP9.24□□□□□ -0.93
GCN1-201ENST00000300648 A0A0A6YYD4 124 aa9.24□□□□□ -0.93
GCN1-201ENST00000300648 I3L3M4 83 aa9.24□□□□□ -0.93
GCN1-201ENST00000300648 IGHV2-70P01814 119 aa9.24□□□□□ -0.93
GCN1-201ENST00000300648 LYZL4Q96KX0 146 aa9.24□□□□□ -0.93
GCN1-201ENST00000300648 C10orf91Q5T1B1 145 aa9.24□□□□□ -0.93
GCN1-201ENST00000300648 FOXL2P58012 376 aa9.24□□□□□ -0.93
GCN1-201ENST00000300648 SHANK2-AS3Q9BTD1 123 aa9.24□□□□□ -0.93
GCN1-201ENST00000300648 PRO1854Q9UHT4 67 aa9.24□□□□□ -0.93
GCN1-201ENST00000300648 A0A1W2PPM0 123 aa9.23□□□□□ -0.93
GCN1-201ENST00000300648 PFN1P07737 140 aaKnown RBP9.23□□□□□ -0.93
GCN1-201ENST00000300648 AGRNO00468 2067 aa9.23□□□□□ -0.93
GCN1-201ENST00000300648 IGKV2-40A0A087WW87 121 aaPredicted RBP9.23□□□□□ -0.93
GCN1-201ENST00000300648 H0YJW9 148 aa9.23□□□□□ -0.93
GCN1-201ENST00000300648 IGKV2D-40P01614 121 aaPredicted RBP9.23□□□□□ -0.93
GCN1-201ENST00000300648 EXOC3-AS1Q8N2X6 119 aa9.23□□□□□ -0.93
GCN1-201ENST00000300648 ZNF114Q8NC26 417 aa9.23□□□□□ -0.93
GCN1-201ENST00000300648 PIEZO1Q92508 2521 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms