RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 OSTCQ9NRP0 149 aa7.33□□□□□ -1.24
PRDM9-201ENST00000296682 SLAQ13239 276 aa7.33□□□□□ -1.24
PRDM9-201ENST00000296682 RNF182Q8N6D2 247 aa7.33□□□□□ -1.24
PRDM9-201ENST00000296682 A8MWL6 223 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 M0R1W7 72 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 SCGB2A1O75556 95 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 FXYD7P58549 80 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 TAS2R60P59551 318 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 PIP4P2Q8N4L2 257 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 ZNF491Q8N8L2 437 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 RCHY1Q96PM5 261 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 TBL2Q9Y4P3 447 aaKnown RBP7.32□□□□□ -1.24
PRDM9-201ENST00000296682 NPFFO15130 113 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 GCGP01275 180 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 TRGV3P03979 118 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 RELQ04864 619 aaPredicted RBP7.32□□□□□ -1.24
PRDM9-201ENST00000296682 KHDC1LQ5JSQ8 128 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 WDR73Q6P4I2 378 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 THAP8Q8NA92 274 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 H3BUX3 64 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 M0R2Z0 102 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 LCN12Q6JVE5 192 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 OR11H6Q8NGC7 330 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 PMCHL2Q9BQD1 86 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 RABAC1Q9UI14 185 aa7.32□□□□□ -1.24
PRDM9-201ENST00000296682 TGFAP01135 160 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 DDTP30046 118 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 TDRG1Q3Y452 100 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 ZNF664Q8N3J9 261 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 C8orf49Q96NF6 230 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 PIMREGQ9BSJ6 248 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 CUBNO60494 3623 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 TRAV9-1A0A075B6T8 112 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 IGHV2-70DA0A0C4DH43 119 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 IGLV2-8P01709 118 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 IGHV4-38-2P0DP08 117 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 C11orf71Q6IPW1 123 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 TMEM75Q8N9X5 138 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 GLMPQ8WWB7 406 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 HIF1ANQ9NWT6 349 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 PSG8Q9UQ74 426 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 JMJD1CQ15652 2540 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 IGHV4-30-2A0A087WSY4 118 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 IGHV7-81A0A0B4J1V7 117 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 IZUMO1RA6ND01 250 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 DIRC3C9JPN6 131 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 CRYGBP07316 175 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 ERCC8Q13216 396 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 JOSD1Q15040 202 aaPredicted RBP7.31□□□□□ -1.24
PRDM9-201ENST00000296682 TMEM190Q8WZ59 177 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 CFHR4Q92496 578 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 FANCD2OSQ96PS1 177 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 RPP21Q9H633 154 aaKnown RBP7.31□□□□□ -1.24
PRDM9-201ENST00000296682 USP24Q9UPU5 2620 aa7.31□□□□□ -1.24
PRDM9-201ENST00000296682 GOSR1O95249 250 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 LY6G5BQ8NDX9 201 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 DEFB104AQ8WTQ1 72 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 LY6LH3BQJ8 138 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 BMPR1BO00238 502 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 SPRY2O43597 315 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 HLA-DQA1P01909 254 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 ZNF124Q15973 351 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 KLK9Q2XQG4 91 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 GRAMD2BQ96HH9 432 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 VAMP8Q9BV40 100 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 KLK9Q9UKQ9 250 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 CENPVL3A0A0U1RRI6 287 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 RNF224P0DH78 156 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 GP9P14770 177 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 RAB4AP20338 218 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 DEFB1P60022 68 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 PKIAP61925 76 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 LMO4P61968 165 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 BLCAPP62952 87 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 TMEM183BQ1AE95 376 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 TMEM95Q3KNT9 176 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 TMEM136Q6ZRR5 245 aa7.3□□□□□ -1.24
PRDM9-201ENST00000296682 HIVEP2P31629 2446 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 IGKV3-20P01619 116 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 TXN2Q99757 166 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 SHANK2-AS3Q9BTD1 123 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 PRDM13Q9H4Q3 707 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 PRORYQ9H606 182 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 NRN1Q9NPD7 142 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 OTORQ9NRC9 128 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 CRYGCP07315 174 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 UBE2E1P51965 193 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 S100A7AQ86SG5 101 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 DTX2Q86UW9 622 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 Q8N9W7 124 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 PRSS3P2Q8NHM4 247 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 TRBV19A0A075B6N1 114 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 ESDP10768 282 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 RPL7P18124 248 aaKnown RBP7.29□□□□□ -1.24
PRDM9-201ENST00000296682 DMRTA1Q5VZB9 504 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 HIST2H2BDQ6DRA6 164 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 TSKUQ8WUA8 353 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 IGF2BP2-AS1Q96M15 143 aa7.29□□□□□ -1.24
PRDM9-201ENST00000296682 FN1P02751 2386 aaKnown RBP7.28□□□□□ -1.24
PRDM9-201ENST00000296682 A0A1B0GV90 55 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms