RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.22□□□□□ -0.77
SLC6A1-201ENST00000287766 NXT2Q9NPJ8 142 aaKnown RBP10.22□□□□□ -0.77
SLC6A1-201ENST00000287766 CCL25O15444 150 aa10.22□□□□□ -0.77
SLC6A1-201ENST00000287766 Q0VG73 95 aa10.22□□□□□ -0.77
SLC6A1-201ENST00000287766 EBLN2Q6P2I7 272 aa10.22□□□□□ -0.77
SLC6A1-201ENST00000287766 ATP5L2Q7Z4Y8 100 aa10.22□□□□□ -0.77
SLC6A1-201ENST00000287766 C18orf32Q8TCD1 76 aa10.22□□□□□ -0.77
SLC6A1-201ENST00000287766 PGPEP1Q9NXJ5 209 aa10.22□□□□□ -0.77
SLC6A1-201ENST00000287766 FABP5P3A8MUU1 101 aa10.22□□□□□ -0.77
SLC6A1-201ENST00000287766 TMEM238C9JI98 176 aa10.22□□□□□ -0.77
SLC6A1-201ENST00000287766 MMP23AO75900 390 aa10.22□□□□□ -0.77
SLC6A1-201ENST00000287766 RAB9AP51151 201 aa10.22□□□□□ -0.77
SLC6A1-201ENST00000287766 NAV3Q8IVL0 2385 aa10.22□□□□□ -0.77
SLC6A1-201ENST00000287766 NUP210LQ5VU65 1888 aa10.21□□□□□ -0.77
SLC6A1-201ENST00000287766 Q8NFD4 153 aa10.21□□□□□ -0.77
SLC6A1-201ENST00000287766 IGF2RP11717 2491 aa10.21□□□□□ -0.77
SLC6A1-201ENST00000287766 TM4SF5O14894 197 aa10.21□□□□□ -0.77
SLC6A1-201ENST00000287766 LY6HO94772 140 aa10.21□□□□□ -0.77
SLC6A1-201ENST00000287766 WT1P19544 449 aaPredicted RBP10.21□□□□□ -0.77
SLC6A1-201ENST00000287766 DLX4Q92988 240 aaPredicted RBP10.21□□□□□ -0.77
SLC6A1-201ENST00000287766 MYO18BQ8IUG5 2567 aa10.21□□□□□ -0.77
SLC6A1-201ENST00000287766 SPRNQ5BIV9 151 aa10.21□□□□□ -0.78
SLC6A1-201ENST00000287766 EXOC3-AS1Q8N2X6 119 aa10.21□□□□□ -0.78
SLC6A1-201ENST00000287766 ASCL2Q99929 193 aa10.21□□□□□ -0.78
SLC6A1-201ENST00000287766 ERG28Q9UKR5 140 aa10.21□□□□□ -0.78
SLC6A1-201ENST00000287766 IGHV3OR16-10A0A075B7F0 116 aa10.21□□□□□ -0.78
SLC6A1-201ENST00000287766 AZU1P20160 251 aa10.21□□□□□ -0.78
SLC6A1-201ENST00000287766 Q6ZSR3 168 aa10.21□□□□□ -0.78
SLC6A1-201ENST00000287766 IGHG3P01860 377 aa10.2□□□□□ -0.78
SLC6A1-201ENST00000287766 TDRG1Q3Y452 100 aa10.2□□□□□ -0.78
SLC6A1-201ENST00000287766 TOMM7Q9P0U1 55 aa10.2□□□□□ -0.78
SLC6A1-201ENST00000287766 ACACBO00763 2458 aa10.2□□□□□ -0.78
SLC6A1-201ENST00000287766 LMO1P25800 156 aa10.2□□□□□ -0.78
SLC6A1-201ENST00000287766 TMEM200BQ69YZ2 307 aa10.2□□□□□ -0.78
SLC6A1-201ENST00000287766 PRSS57Q6UWY2 283 aa10.2□□□□□ -0.78
SLC6A1-201ENST00000287766 LYPD2Q6UXB3 125 aa10.2□□□□□ -0.78
SLC6A1-201ENST00000287766 NPFFR1Q9GZQ6 430 aa10.2□□□□□ -0.78
SLC6A1-201ENST00000287766 CHODLQ9H9P2 273 aa10.2□□□□□ -0.78
SLC6A1-201ENST00000287766 OTORQ9NRC9 128 aa10.2□□□□□ -0.78
SLC6A1-201ENST00000287766 DDB2Q92466 427 aa10.2□□□□□ -0.78
SLC6A1-201ENST00000287766 SRSF1Q07955 248 aaKnown RBP eCLIP10.19□□□□□ -0.78
SLC6A1-201ENST00000287766 SLC25A48Q6ZT89 311 aaKnown RBP10.19□□□□□ -0.78
SLC6A1-201ENST00000287766 TRBV7-9A0A0J9YWB2 115 aa10.19□□□□□ -0.78
SLC6A1-201ENST00000287766 CEACAM4O75871 244 aa10.19□□□□□ -0.78
SLC6A1-201ENST00000287766 PPBPP02775 128 aa10.19□□□□□ -0.78
SLC6A1-201ENST00000287766 GAFA1Q96PS6 74 aa10.19□□□□□ -0.78
SLC6A1-201ENST00000287766 CHTOPQ9Y3Y2 248 aaKnown RBP10.19□□□□□ -0.78
SLC6A1-201ENST00000287766 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.19□□□□□ -0.78
SLC6A1-201ENST00000287766 CDKN1BP46527 198 aa10.19□□□□□ -0.78
SLC6A1-201ENST00000287766 KLF17Q5JT82 389 aaPredicted RBP10.19□□□□□ -0.78
SLC6A1-201ENST00000287766 C11orf53Q8IXP5 236 aa10.19□□□□□ -0.78
SLC6A1-201ENST00000287766 TCRBV4S1A1TA0A5B7 111 aa10.19□□□□□ -0.78
SLC6A1-201ENST00000287766 SMAD7O15105 426 aaKnown RBP10.19□□□□□ -0.78
SLC6A1-201ENST00000287766 SMKR1H3BMG3 65 aa10.18□□□□□ -0.78
SLC6A1-201ENST00000287766 ASIPP42127 132 aa10.18□□□□□ -0.78
SLC6A1-201ENST00000287766 RAX2Q96IS3 184 aa10.18□□□□□ -0.78
SLC6A1-201ENST00000287766 ATP6V0BQ99437 205 aa10.18□□□□□ -0.78
SLC6A1-201ENST00000287766 CHAC1Q9BUX1 264 aa10.18□□□□□ -0.78
SLC6A1-201ENST00000287766 DNAH14Q0VDD8 3507 aa10.18□□□□□ -0.78
SLC6A1-201ENST00000287766 KRTAP27-1Q3LI81 207 aa10.18□□□□□ -0.78
SLC6A1-201ENST00000287766 ANXA2RQ3ZCQ2 193 aa10.18□□□□□ -0.78
SLC6A1-201ENST00000287766 RNASE6Q93091 150 aaKnown RBP10.18□□□□□ -0.78
SLC6A1-201ENST00000287766 C21orf62Q9NYP8 219 aa10.18□□□□□ -0.78
SLC6A1-201ENST00000287766 GAGE12HA6NDE8 117 aa10.18□□□□□ -0.78
SLC6A1-201ENST00000287766 PMS2P5A8MQ11 134 aa10.18□□□□□ -0.78
SLC6A1-201ENST00000287766 APOBEC3AP31941 199 aaPredicted RBP10.18□□□□□ -0.78
SLC6A1-201ENST00000287766 IFI27P40305 119 aaPredicted RBP10.18□□□□□ -0.78
SLC6A1-201ENST00000287766 AMTNQ6UX39 209 aa10.18□□□□□ -0.78
SLC6A1-201ENST00000287766 F2Z2F3 143 aa10.17□□□□□ -0.78
SLC6A1-201ENST00000287766 TCRAP04437 139 aa10.17□□□□□ -0.78
SLC6A1-201ENST00000287766 LYZL1Q6UWQ5 148 aa10.17□□□□□ -0.78
SLC6A1-201ENST00000287766 C9JAW5 83 aa10.17□□□□□ -0.78
SLC6A1-201ENST00000287766 C15orf65H3BRN8 121 aa10.17□□□□□ -0.78
SLC6A1-201ENST00000287766 NPC2P61916 151 aa10.17□□□□□ -0.78
SLC6A1-201ENST00000287766 AMN1Q8IY45 258 aa10.17□□□□□ -0.78
SLC6A1-201ENST00000287766 EDA2RQ9HAV5 297 aa10.17□□□□□ -0.78
SLC6A1-201ENST00000287766 MOB4Q9Y3A3 225 aa10.17□□□□□ -0.78
SLC6A1-201ENST00000287766 C9orf118A6NHY6 69 aa10.17□□□□□ -0.78
SLC6A1-201ENST00000287766 UBE2L6O14933 153 aa10.17□□□□□ -0.78
SLC6A1-201ENST00000287766 WNT2P09544 360 aa10.17□□□□□ -0.78
SLC6A1-201ENST00000287766 FAM106CPP0CH98 169 aa10.17□□□□□ -0.78
SLC6A1-201ENST00000287766 SSBP2P81877 361 aaPredicted RBP10.17□□□□□ -0.78
SLC6A1-201ENST00000287766 VWC2Q2TAL6 325 aa10.17□□□□□ -0.78
SLC6A1-201ENST00000287766 GLMPQ8WWB7 406 aa10.17□□□□□ -0.78
SLC6A1-201ENST00000287766 PLNP26678 52 aa10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 TNFRSF14Q92956 283 aa10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 SLAQ13239 276 aa10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 PPP1R27Q86WC6 154 aa10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 COPS9Q8WXC6 57 aa10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 TMEM133Q9H2Q1 129 aa10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 CFAP54Q96N23 3096 aa10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 A0A0G2JNJ9 132 aa10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 MBD3L4A6NDZ8 208 aaPredicted RBP10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 MBD3L3A6NE82 208 aaPredicted RBP10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 MBD3L5A6NJ08 208 aaPredicted RBP10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 SAP30O75446 220 aa10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 VDAC2P45880 294 aaPredicted RBP10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 DIAPH2-AS1Q14236 149 aa10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 RASL11AQ6T310 242 aa10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 TEX43Q6ZNM6 134 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms