RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 DUX4L9Q6RFH8 374 aaPredicted RBP9.35□□□□□ -0.91
VPS33A-201ENST00000267199 TMEM213A2RRL7 107 aa9.35□□□□□ -0.91
VPS33A-201ENST00000267199 NBR2O15453 112 aa9.35□□□□□ -0.91
VPS33A-201ENST00000267199 TMPRSS3P57727 454 aa9.35□□□□□ -0.91
VPS33A-201ENST00000267199 ETDBQ3ZM63 59 aa9.35□□□□□ -0.91
VPS33A-201ENST00000267199 FAM159AQ6UWV7 190 aa9.35□□□□□ -0.91
VPS33A-201ENST00000267199 CACNA1AO00555 2505 aa9.35□□□□□ -0.91
VPS33A-201ENST00000267199 PPBPP02775 128 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 WNT2P09544 360 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 PSMG4Q5JS54 123 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 BVES-AS1Q5T3Y7 98 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 ARPC1AQ92747 370 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 PTPRQQ9UMZ3 2332 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 IGHV1-8P0DP01 117 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 EBLN2Q6P2I7 272 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 TSPAN13O95857 204 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 LY6EQ16553 131 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 TEX29Q8N6K0 151 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 ZC2HC1AQ96GY0 325 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 TMEM131Q92545 1883 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 TOMM40O96008 361 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 IGHV4-39P01824 125 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 ASIPP42127 132 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 ZNF134P52741 427 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 PVRIGQ6DKI7 326 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 Q86TA4 180 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 CHAC1Q9BUX1 264 aa9.34□□□□□ -0.91
VPS33A-201ENST00000267199 ID1P41134 155 aa9.33□□□□□ -0.92
VPS33A-201ENST00000267199 TMEM158Q8WZ71 300 aa9.33□□□□□ -0.92
VPS33A-201ENST00000267199 C11orf52Q96A22 123 aa9.33□□□□□ -0.92
VPS33A-201ENST00000267199 PIEZO2Q9H5I5 2752 aa9.33□□□□□ -0.92
VPS33A-201ENST00000267199 IGHV3-64A0A075B6Q5 118 aa9.33□□□□□ -0.92
VPS33A-201ENST00000267199 C15orf65H3BRN8 121 aa9.33□□□□□ -0.92
VPS33A-201ENST00000267199 PRTN3P24158 256 aa9.33□□□□□ -0.92
VPS33A-201ENST00000267199 RAB9AP51151 201 aa9.33□□□□□ -0.92
VPS33A-201ENST00000267199 LYPD2Q6UXB3 125 aa9.33□□□□□ -0.92
VPS33A-201ENST00000267199 TMEM14BQ9NUH8 114 aa9.33□□□□□ -0.92
VPS33A-201ENST00000267199 SMIM27A0A1W2PRY6 76 aa9.33□□□□□ -0.92
VPS33A-201ENST00000267199 PSMB11A5LHX3 300 aa9.33□□□□□ -0.92
VPS33A-201ENST00000267199 SRSF1Q07955 248 aaKnown RBP eCLIP9.33□□□□□ -0.92
VPS33A-201ENST00000267199 KLRB1Q12918 225 aa9.33□□□□□ -0.92
VPS33A-201ENST00000267199 CHTOPQ9Y3Y2 248 aaKnown RBP9.33□□□□□ -0.92
VPS33A-201ENST00000267199 SH2D1AO60880 128 aa9.32□□□□□ -0.92
VPS33A-201ENST00000267199 TSSC4Q9Y5U2 329 aaPredicted RBP9.32□□□□□ -0.92
VPS33A-201ENST00000267199 IGLC7A0M8Q6 106 aa9.32□□□□□ -0.92
VPS33A-201ENST00000267199 Q6ZS92 163 aa9.32□□□□□ -0.92
VPS33A-201ENST00000267199 TRAV2A0A0B4J234 112 aa9.32□□□□□ -0.92
VPS33A-201ENST00000267199 ATP5G2Q06055 141 aa9.32□□□□□ -0.92
VPS33A-201ENST00000267199 KRTAP27-1Q3LI81 207 aa9.32□□□□□ -0.92
VPS33A-201ENST00000267199 LINC00173Q6ZV60 143 aa9.32□□□□□ -0.92
VPS33A-201ENST00000267199 TRGV9Q99603 122 aa9.32□□□□□ -0.92
VPS33A-201ENST00000267199 A0A0G2JNJ9 132 aa9.32□□□□□ -0.92
VPS33A-201ENST00000267199 A0A1W2PPI3 338 aa9.32□□□□□ -0.92
VPS33A-201ENST00000267199 A8MWV9 139 aa9.32□□□□□ -0.92
VPS33A-201ENST00000267199 GEMIN7Q9H840 131 aaKnown RBP9.32□□□□□ -0.92
VPS33A-201ENST00000267199 Q9UFV3 132 aa9.32□□□□□ -0.92
VPS33A-201ENST00000267199 CENPVQ7Z7K6 275 aaPredicted RBP9.31□□□□□ -0.92
VPS33A-201ENST00000267199 SYT8Q8NBV8 401 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 SLC25A2Q9BXI2 301 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 OTOGLQ3ZCN5 2332 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 C9orf118A6NHY6 69 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 NPIPB6E9PJ23 425 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 MMP23AO75900 390 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 RNASE4P34096 147 aaKnown RBP9.31□□□□□ -0.92
VPS33A-201ENST00000267199 CDKN1BP46527 198 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 MEIG1Q5JSS6 88 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 EEF1AKMT3Q96AZ1 226 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 MRAP2Q96G30 205 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 ADAMTS9Q9P2N4 1935 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 IGHV3OR16-12A0A075B7B8 117 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 C17orf58Q2M2W7 97 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 TMEM95Q3KNT9 176 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 TNFRSF14Q92956 283 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 PGPEP1Q9NXJ5 209 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 TRAV40A0A0B4J280 105 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 IGHV1-3A0A0C4DH29 117 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 SAP30O75446 220 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 IGHV3-11P01762 117 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 COX8AP10176 69 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 SCGB1A1P11684 91 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 WFDC12Q8WWY7 111 aa9.31□□□□□ -0.92
VPS33A-201ENST00000267199 H3BRM9 83 aa9.3□□□□□ -0.92
VPS33A-201ENST00000267199 TRGV3P03979 118 aa9.3□□□□□ -0.92
VPS33A-201ENST00000267199 ZNF672Q499Z4 452 aaPredicted RBP9.3□□□□□ -0.92
VPS33A-201ENST00000267199 CLEC2AQ6UVW9 174 aa9.3□□□□□ -0.92
VPS33A-201ENST00000267199 C11orf53Q8IXP5 236 aa9.3□□□□□ -0.92
VPS33A-201ENST00000267199 C10orf126Q8N4M7 172 aa9.3□□□□□ -0.92
VPS33A-201ENST00000267199 CUL9Q8IWT3 2517 aa9.3□□□□□ -0.92
VPS33A-201ENST00000267199 IGKV3OR2-268A0A0C4DH90 116 aa9.3□□□□□ -0.92
VPS33A-201ENST00000267199 FNDC10F2Z333 226 aa9.3□□□□□ -0.92
VPS33A-201ENST00000267199 TRAV12-3A0A0B4J271 114 aa9.3□□□□□ -0.92
VPS33A-201ENST00000267199 IGHV2-70DA0A0C4DH43 119 aa9.3□□□□□ -0.92
VPS33A-201ENST00000267199 K7ERJ3 54 aa9.3□□□□□ -0.92
VPS33A-201ENST00000267199 CEACAM4O75871 244 aa9.3□□□□□ -0.92
VPS33A-201ENST00000267199 CRIP3Q6Q6R5 217 aa9.3□□□□□ -0.92
VPS33A-201ENST00000267199 C1orf122Q6ZSJ8 110 aa9.3□□□□□ -0.92
VPS33A-201ENST00000267199 WNK1Q9H4A3 2382 aa9.3□□□□□ -0.92
VPS33A-201ENST00000267199 PRR20EP86478 221 aa9.29□□□□□ -0.92
VPS33A-201ENST00000267199 PRR20CP86479 221 aa9.29□□□□□ -0.92
VPS33A-201ENST00000267199 PRR20DP86480 221 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms