RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 KIAA1644Q3SXP7 199 aa8.67□□□□□ -1.02
MSH3-201ENST00000265081 Q6AWC8 147 aa8.67□□□□□ -1.02
MSH3-201ENST00000265081 TCF24Q7RTU0 167 aa8.67□□□□□ -1.02
MSH3-201ENST00000265081 TRAV8-1A0A0A6YYK1 113 aa8.66□□□□□ -1.02
MSH3-201ENST00000265081 SH2D7A6NKC9 451 aaPredicted RBP8.66□□□□□ -1.02
MSH3-201ENST00000265081 RAB4AP20338 218 aa8.66□□□□□ -1.02
MSH3-201ENST00000265081 U3KQK5 164 aa8.66□□□□□ -1.02
MSH3-201ENST00000265081 PCNX1Q96RV3 2341 aa8.66□□□□□ -1.02
MSH3-201ENST00000265081 PKDREJQ9NTG1 2253 aa8.66□□□□□ -1.02
MSH3-201ENST00000265081 H3BTX0 84 aa8.66□□□□□ -1.02
MSH3-201ENST00000265081 GNLYP22749 145 aa8.66□□□□□ -1.02
MSH3-201ENST00000265081 SIGLECL1Q8N7X8 197 aa8.66□□□□□ -1.02
MSH3-201ENST00000265081 CHCHD1Q96BP2 118 aaKnown RBP8.66□□□□□ -1.02
MSH3-201ENST00000265081 SCGB1D1O95968 90 aa8.66□□□□□ -1.02
MSH3-201ENST00000265081 HES1Q14469 280 aa8.66□□□□□ -1.02
MSH3-201ENST00000265081 PRR27Q6MZM9 219 aa8.66□□□□□ -1.02
MSH3-201ENST00000265081 CCDC140Q96MF4 163 aa8.66□□□□□ -1.02
MSH3-201ENST00000265081 LOC102724200A0A096LPH7 203 aaPredicted RBP8.65□□□□□ -1.02
MSH3-201ENST00000265081 RBAKDNA6NC62 111 aa8.65□□□□□ -1.02
MSH3-201ENST00000265081 SNRPCP09234 159 aaKnown RBP8.65□□□□□ -1.02
MSH3-201ENST00000265081 PPP1R14DQ9NXH3 145 aa8.65□□□□□ -1.02
MSH3-201ENST00000265081 ARHGAP32A7KAX9 2087 aa8.65□□□□□ -1.02
MSH3-201ENST00000265081 C2orf70A6NJV1 201 aa8.65□□□□□ -1.02
MSH3-201ENST00000265081 RPL7P18124 248 aaKnown RBP8.65□□□□□ -1.02
MSH3-201ENST00000265081 NDUFS8O00217 210 aa8.65□□□□□ -1.03
MSH3-201ENST00000265081 FAM162BQ5T6X4 162 aa8.65□□□□□ -1.03
MSH3-201ENST00000265081 SGK494Q96LW2 274 aa8.65□□□□□ -1.03
MSH3-201ENST00000265081 K7EQM0 130 aa8.64□□□□□ -1.03
MSH3-201ENST00000265081 ATP6V0E1O15342 81 aa8.64□□□□□ -1.03
MSH3-201ENST00000265081 RAB9AP51151 201 aa8.64□□□□□ -1.03
MSH3-201ENST00000265081 TDRG1Q3Y452 100 aa8.64□□□□□ -1.03
MSH3-201ENST00000265081 PRNTQ86SH4 94 aa8.64□□□□□ -1.03
MSH3-201ENST00000265081 ZMAT5Q9UDW3 170 aaKnown RBP8.64□□□□□ -1.03
MSH3-201ENST00000265081 ZNF580Q9UK33 172 aa8.64□□□□□ -1.03
MSH3-201ENST00000265081 NCBP2LA6PVI3 153 aaKnown RBP8.64□□□□□ -1.03
MSH3-201ENST00000265081 SCGB2A1O75556 95 aa8.64□□□□□ -1.03
MSH3-201ENST00000265081 S100A7P31151 101 aa8.64□□□□□ -1.03
MSH3-201ENST00000265081 RABAC1Q9UI14 185 aa8.64□□□□□ -1.03
MSH3-201ENST00000265081 C10orf105Q8TEF2 133 aa8.64□□□□□ -1.03
MSH3-201ENST00000265081 MIEN1Q9BRT3 115 aa8.64□□□□□ -1.03
MSH3-201ENST00000265081 CNFNQ9BYD5 112 aa8.64□□□□□ -1.03
MSH3-201ENST00000265081 RP1L1Q8IWN7 2480 aaPredicted RBP8.64□□□□□ -1.03
MSH3-201ENST00000265081 TRBV7-1A0A0A6YYK4 115 aa8.64□□□□□ -1.03
MSH3-201ENST00000265081 BUB3O43684 328 aa8.64□□□□□ -1.03
MSH3-201ENST00000265081 C3orf79P0CE67 100 aa8.64□□□□□ -1.03
MSH3-201ENST00000265081 MRPL53Q96EL3 112 aaKnown RBP8.64□□□□□ -1.03
MSH3-201ENST00000265081 SSBP4Q9BWG4 385 aaPredicted RBP8.64□□□□□ -1.03
MSH3-201ENST00000265081 SVEP1Q4LDE5 3571 aa8.63□□□□□ -1.03
MSH3-201ENST00000265081 FAM181BA6NEQ2 426 aa8.63□□□□□ -1.03
MSH3-201ENST00000265081 OR2T8A6NH00 312 aa8.63□□□□□ -1.03
MSH3-201ENST00000265081 Q56UQ5 140 aa8.63□□□□□ -1.03
MSH3-201ENST00000265081 ABCA2Q9BZC7 2435 aa8.63□□□□□ -1.03
MSH3-201ENST00000265081 LINC01546A6NGU7 62 aa8.63□□□□□ -1.03
MSH3-201ENST00000265081 CD33P20138 364 aa8.63□□□□□ -1.03
MSH3-201ENST00000265081 COL8A1P27658 744 aa8.63□□□□□ -1.03
MSH3-201ENST00000265081 PGLYRP4Q96LB8 373 aa8.63□□□□□ -1.03
MSH3-201ENST00000265081 SAMD10Q9BYL1 202 aa8.63□□□□□ -1.03
MSH3-201ENST00000265081 IGF1P05019 195 aa8.63□□□□□ -1.03
MSH3-201ENST00000265081 RPH3ALQ9UNE2 315 aa8.63□□□□□ -1.03
MSH3-201ENST00000265081 AMTP48728 403 aa8.62□□□□□ -1.03
MSH3-201ENST00000265081 DAZAP1Q96EP5 407 aaKnown RBP8.62□□□□□ -1.03
MSH3-201ENST00000265081 C8orf49Q96NF6 230 aa8.62□□□□□ -1.03
MSH3-201ENST00000265081 PRR25Q96S07 402 aa8.62□□□□□ -1.03
MSH3-201ENST00000265081 NPFFR1Q9GZQ6 430 aa8.62□□□□□ -1.03
MSH3-201ENST00000265081 IGHV1-69DA0A0B4J2H0 117 aa8.62□□□□□ -1.03
MSH3-201ENST00000265081 FAM223BA6NKX1 122 aa8.62□□□□□ -1.03
MSH3-201ENST00000265081 IGHV1-69P01742 117 aa8.62□□□□□ -1.03
MSH3-201ENST00000265081 IGLC6P0CF74 106 aa8.62□□□□□ -1.03
MSH3-201ENST00000265081 C15orf32Q32M92 178 aa8.62□□□□□ -1.03
MSH3-201ENST00000265081 SAPCD1Q5SSQ6 148 aa8.62□□□□□ -1.03
MSH3-201ENST00000265081 EBLN2Q6P2I7 272 aa8.62□□□□□ -1.03
MSH3-201ENST00000265081 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.62□□□□□ -1.03
MSH3-201ENST00000265081 FAM223AQ8IWN6 122 aa8.62□□□□□ -1.03
MSH3-201ENST00000265081 LINC00469Q8N7U9 141 aa8.62□□□□□ -1.03
MSH3-201ENST00000265081 AAMDCQ9H7C9 122 aa8.62□□□□□ -1.03
MSH3-201ENST00000265081 MOB4Q9Y3A3 225 aa8.62□□□□□ -1.03
MSH3-201ENST00000265081 A0A1B0GUT8 65 aa8.61□□□□□ -1.03
MSH3-201ENST00000265081 H3BUA1 57 aa8.61□□□□□ -1.03
MSH3-201ENST00000265081 CHEK1O14757 476 aa8.61□□□□□ -1.03
MSH3-201ENST00000265081 SNHG12Q9BXW3 62 aa8.61□□□□□ -1.03
MSH3-201ENST00000265081 S4R3C0 116 aa8.61□□□□□ -1.03
MSH3-201ENST00000265081 M0R3E3 92 aa8.61□□□□□ -1.03
MSH3-201ENST00000265081 OR2D3Q8NGH3 330 aa8.61□□□□□ -1.03
MSH3-201ENST00000265081 SPOCK3Q9BQ16 436 aa8.61□□□□□ -1.03
MSH3-201ENST00000265081 EREGO14944 169 aa8.61□□□□□ -1.03
MSH3-201ENST00000265081 C20orf202A1L168 122 aa8.6□□□□□ -1.03
MSH3-201ENST00000265081 LINC01548A6NM66 108 aa8.6□□□□□ -1.03
MSH3-201ENST00000265081 PMCHP20382 165 aa8.6□□□□□ -1.03
MSH3-201ENST00000265081 RHOGP84095 191 aa8.6□□□□□ -1.03
MSH3-201ENST00000265081 ROS1P08922 2347 aa8.6□□□□□ -1.03
MSH3-201ENST00000265081 SH2D1AO60880 128 aa8.6□□□□□ -1.03
MSH3-201ENST00000265081 PTPRZ1P23471 2315 aaPredicted RBP8.6□□□□□ -1.03
MSH3-201ENST00000265081 IGHV1-24A0A0C4DH33 117 aa8.6□□□□□ -1.03
MSH3-201ENST00000265081 ARMS2P0C7Q2 107 aa8.6□□□□□ -1.03
MSH3-201ENST00000265081 UNQ5815/PRO19632Q6UWF5 114 aa8.6□□□□□ -1.03
MSH3-201ENST00000265081 SPATA12Q7Z6I5 190 aa8.6□□□□□ -1.03
MSH3-201ENST00000265081 PIMREGQ9BSJ6 248 aa8.6□□□□□ -1.03
MSH3-201ENST00000265081 VAMP8Q9BV40 100 aa8.6□□□□□ -1.03
MSH3-201ENST00000265081 TRAV8-2A0A0B4J237 113 aa8.59□□□□□ -1.03
MSH3-201ENST00000265081 CAMPP49913 170 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms