RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 CYP2G1PQ6ZSU1 146 aa13.83□□□□□ -0.2
SDF4-201ENST00000263741 METTL26Q96S19 204 aa13.83□□□□□ -0.2
SDF4-201ENST00000263741 RNF2Q99496 336 aa13.83□□□□□ -0.2
SDF4-201ENST00000263741 MGST2Q99735 147 aa13.83□□□□□ -0.2
SDF4-201ENST00000263741 TMEM147Q9BVK8 224 aa13.83□□□□□ -0.2
SDF4-201ENST00000263741 GGACTQ9BVM4 153 aa13.83□□□□□ -0.2
SDF4-201ENST00000263741 WDR61Q9GZS3 305 aaKnown RBP13.83□□□□□ -0.2
SDF4-201ENST00000263741 NIT2Q9NQR4 276 aa13.83□□□□□ -0.2
SDF4-201ENST00000263741 VAX2Q9UIW0 290 aa13.83□□□□□ -0.2
SDF4-201ENST00000263741 LSM4Q9Y4Z0 139 aaKnown RBP13.83□□□□□ -0.2
SDF4-201ENST00000263741 WI2-2373I1.2A0A1W2PRP0 233 aa13.82□□□□□ -0.2
SDF4-201ENST00000263741 FNDC10F2Z333 226 aa13.82□□□□□ -0.2
SDF4-201ENST00000263741 FABP1P07148 127 aa13.82□□□□□ -0.2
SDF4-201ENST00000263741 TEPPQ6URK8 271 aa13.82□□□□□ -0.2
SDF4-201ENST00000263741 LCN15Q6UWW0 184 aa13.82□□□□□ -0.2
SDF4-201ENST00000263741 DOK5Q9P104 306 aa13.82□□□□□ -0.2
SDF4-201ENST00000263741 ZNF256Q9Y2P7 627 aaPredicted RBP13.82□□□□□ -0.2
SDF4-201ENST00000263741 IGKV3-7A0A075B6H7 116 aa13.81□□□□□ -0.2
SDF4-201ENST00000263741 MAP1LC3B2A6NCE7 125 aa13.81□□□□□ -0.2
SDF4-201ENST00000263741 ZNF727A8MUV8 499 aa13.81□□□□□ -0.2
SDF4-201ENST00000263741 ATP6V1FQ16864 119 aa13.81□□□□□ -0.2
SDF4-201ENST00000263741 MAP1LC3BQ9GZQ8 125 aa13.81□□□□□ -0.2
SDF4-201ENST00000263741 TMEM242Q9NWH2 141 aa13.81□□□□□ -0.2
SDF4-201ENST00000263741 NPPCP23582 126 aa13.81□□□□□ -0.2
SDF4-201ENST00000263741 S100PP25815 95 aa13.81□□□□□ -0.2
SDF4-201ENST00000263741 VWC2Q2TAL6 325 aa13.81□□□□□ -0.2
SDF4-201ENST00000263741 MBP02144 154 aa13.8□□□□□ -0.2
SDF4-201ENST00000263741 CRYBB3P26998 211 aa13.8□□□□□ -0.2
SDF4-201ENST00000263741 S100A2P29034 98 aa13.8□□□□□ -0.2
SDF4-201ENST00000263741 PMS2P11Q13670 270 aa13.8□□□□□ -0.2
SDF4-201ENST00000263741 FAM90A2PQ658T7 463 aa13.8□□□□□ -0.2
SDF4-201ENST00000263741 LCN12Q6JVE5 192 aa13.8□□□□□ -0.2
SDF4-201ENST00000263741 STPG3Q8N7X2 389 aa13.8□□□□□ -0.2
SDF4-201ENST00000263741 OR51M1Q9H341 326 aa13.8□□□□□ -0.2
SDF4-201ENST00000263741 TECRQ9NZ01 308 aaKnown RBP13.8□□□□□ -0.2
SDF4-201ENST00000263741 WDR83OSQ9Y284 106 aa13.8□□□□□ -0.2
SDF4-201ENST00000263741 LINC00869P0C866 280 aa13.79□□□□□ -0.2
SDF4-201ENST00000263741 GP9P14770 177 aa13.79□□□□□ -0.2
SDF4-201ENST00000263741 HOXA5P20719 270 aa13.79□□□□□ -0.2
SDF4-201ENST00000263741 FGF7P21781 194 aa13.79□□□□□ -0.2
SDF4-201ENST00000263741 CTDSP1Q9GZU7 261 aa13.79□□□□□ -0.2
SDF4-201ENST00000263741 RABAC1Q9UI14 185 aa13.79□□□□□ -0.2
SDF4-201ENST00000263741 ORM2P19652 201 aa13.79□□□□□ -0.2
SDF4-201ENST00000263741 OR1B1Q8NGR6 318 aa13.79□□□□□ -0.2
SDF4-201ENST00000263741 GGTLC1Q9BX51 225 aa13.79□□□□□ -0.2
SDF4-201ENST00000263741 SLC39A9Q9NUM3 307 aa13.79□□□□□ -0.2
SDF4-201ENST00000263741 URGCP-MRPS24S4R325 110 aa13.79□□□□□ -0.2
SDF4-201ENST00000263741 ZNF726P1Q15940 193 aa13.78□□□□□ -0.2
SDF4-201ENST00000263741 LINC00469Q8N7U9 141 aa13.78□□□□□ -0.2
SDF4-201ENST00000263741 VSIRQ9H7M9 311 aa13.78□□□□□ -0.2
SDF4-201ENST00000263741 ZNF785A8K8V0 405 aa13.78□□□□□ -0.2
SDF4-201ENST00000263741 GSN-AS1Q9NRJ2 163 aa13.78□□□□□ -0.2
SDF4-201ENST00000263741 SLC45A2Q9UMX9 530 aa13.78□□□□□ -0.2
SDF4-201ENST00000263741 ELOA3CA0A087WX78 387 aaPredicted RBP13.77□□□□□ -0.21
SDF4-201ENST00000263741 K7EIL1 84 aa13.77□□□□□ -0.21
SDF4-201ENST00000263741 NDUFS6O75380 124 aaKnown RBP13.77□□□□□ -0.21
SDF4-201ENST00000263741 CXCL1P09341 107 aa13.77□□□□□ -0.21
SDF4-201ENST00000263741 FGF8P55075 233 aaPredicted RBP13.77□□□□□ -0.21
SDF4-201ENST00000263741 NDUFA6P56556 154 aa13.77□□□□□ -0.21
SDF4-201ENST00000263741 MIC13Q5XKP0 118 aa13.77□□□□□ -0.21
SDF4-201ENST00000263741 RBPMS2Q6ZRY4 209 aaKnown RBP13.77□□□□□ -0.21
SDF4-201ENST00000263741 TCF24Q7RTU0 167 aa13.77□□□□□ -0.21
SDF4-201ENST00000263741 GBGT1Q8N5D6 347 aa13.77□□□□□ -0.21
SDF4-201ENST00000263741 U3KQE9 123 aa13.77□□□□□ -0.21
SDF4-201ENST00000263741 PRKDCP78527 4128 aaKnown RBP13.77□□□□□ -0.21
SDF4-201ENST00000263741 TGIF2-C20orf24A0A0A6YYL0 155 aa13.76□□□□□ -0.21
SDF4-201ENST00000263741 TFPI2P48307 235 aa13.76□□□□□ -0.21
SDF4-201ENST00000263741 PSMB3P49720 205 aa13.76□□□□□ -0.21
SDF4-201ENST00000263741 FAM210BQ96KR6 192 aa13.76□□□□□ -0.21
SDF4-201ENST00000263741 UHRF2Q96PU4 802 aa13.76□□□□□ -0.21
SDF4-201ENST00000263741 MANBALQ9NQG1 85 aa13.76□□□□□ -0.21
SDF4-201ENST00000263741 CTXND1A0A1B0GTU2 59 aa13.76□□□□□ -0.21
SDF4-201ENST00000263741 OR2K2Q8NGT1 345 aa13.76□□□□□ -0.21
SDF4-201ENST00000263741 SDF2L1Q9HCN8 221 aa13.76□□□□□ -0.21
SDF4-201ENST00000263741 NAT8Q9UHE5 227 aa13.76□□□□□ -0.21
SDF4-201ENST00000263741 PPP1R2P9O14990 202 aa13.75□□□□□ -0.21
SDF4-201ENST00000263741 OR5G3P0C626 314 aa13.75□□□□□ -0.21
SDF4-201ENST00000263741 SELENOTP62341 195 aa13.75□□□□□ -0.21
SDF4-201ENST00000263741 RPL11P62913 178 aaKnown RBP13.75□□□□□ -0.21
SDF4-201ENST00000263741 LEMD1Q68G75 181 aa13.75□□□□□ -0.21
SDF4-201ENST00000263741 ZNF709Q8N972 641 aa13.75□□□□□ -0.21
SDF4-201ENST00000263741 NPCDR1Q9BY65 106 aa13.75□□□□□ -0.21
SDF4-201ENST00000263741 WFDC10AQ9H1F0 79 aa13.75□□□□□ -0.21
SDF4-201ENST00000263741 A6NJY4 79 aa13.75□□□□□ -0.21
SDF4-201ENST00000263741 C17orf112F2Z3M2 114 aa13.75□□□□□ -0.21
SDF4-201ENST00000263741 BUB3O43684 328 aa13.75□□□□□ -0.21
SDF4-201ENST00000263741 CD7P09564 240 aa13.75□□□□□ -0.21
SDF4-201ENST00000263741 MEF2BQ02080 365 aaPredicted RBP13.75□□□□□ -0.21
SDF4-201ENST00000263741 SSX7Q7RTT5 188 aa13.75□□□□□ -0.21
SDF4-201ENST00000263741 GLMPQ8WWB7 406 aa13.75□□□□□ -0.21
SDF4-201ENST00000263741 A0A1W2PS18 150 aa13.74□□□□□ -0.21
SDF4-201ENST00000263741 TMEM250H0YL14 139 aa13.74□□□□□ -0.21
SDF4-201ENST00000263741 C16orf54Q6UWD8 224 aa13.74□□□□□ -0.21
SDF4-201ENST00000263741 SMIM7Q9BQ49 75 aa13.74□□□□□ -0.21
SDF4-201ENST00000263741 ACTR3CQ9C0K3 210 aaPredicted RBP13.74□□□□□ -0.21
SDF4-201ENST00000263741 SLC25A22Q9H936 323 aa13.74□□□□□ -0.21
SDF4-201ENST00000263741 BMI1P35226 326 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 CD81P60033 236 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 RAB31Q13636 194 aa13.73□□□□□ -0.21
SDF4-201ENST00000263741 PATE2Q6UY27 113 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms