RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 LINC00528Q8N1L1 170 aa7.35□□□□□ -1.23
SNRNP40-201ENST00000263694 OR4F17Q8NGA8 305 aa7.35□□□□□ -1.23
SNRNP40-201ENST00000263694 MARC2Q969Z3 335 aa7.35□□□□□ -1.23
SNRNP40-201ENST00000263694 GRAMD2BQ96HH9 432 aa7.35□□□□□ -1.23
SNRNP40-201ENST00000263694 OR4F4Q96R69 305 aa7.35□□□□□ -1.23
SNRNP40-201ENST00000263694 PFDN2Q9UHV9 154 aa7.35□□□□□ -1.23
SNRNP40-201ENST00000263694 TRBV19A0A075B6N1 114 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 RBFOX3A6NFN3 312 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 FAM74A7A6NL05 159 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 C9JQL5 133 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 HLA-DMBP28068 263 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 GALR1P47211 349 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 ATP5G3P48201 142 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 TFPI2P48307 235 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 PSMB3P49720 205 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 ICAM4Q14773 271 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 GUK1Q16774 197 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 CST9LP1Q5W188 147 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 FAM90A2PQ658T7 463 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 EXOC3-AS1Q8N2X6 119 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 STXBP6Q8NFX7 210 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 SUN5Q8TC36 379 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 RXFP4Q8TDU9 374 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 FAM210AQ96ND0 272 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 EIF5A2Q9GZV4 153 aaKnown RBP7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 TMEM167BQ9NRX6 74 aa7.34□□□□□ -1.23
SNRNP40-201ENST00000263694 LOC102723971A0A1B0GUV8 181 aa7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 IZUMO1RA6ND01 250 aa7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 SAP30O75446 220 aa7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 S100A7P31151 101 aa7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 SUMO1P63165 101 aaKnown RBP7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 DEFB114Q30KQ6 69 aa7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 SHISA2Q6UWI4 295 aa7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 RNF182Q8N6D2 247 aa7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 DYNLRB2Q8TF09 96 aa7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 TRAV8-2A0A0B4J237 113 aa7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 GGTLC3B5MD39 225 aa7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 M0QZ24 198 aa7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 BCL2P10415 239 aa7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 CD300EQ496F6 205 aaPredicted RBP7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 TMEM61Q8N0U2 210 aa7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 GPR82Q96P67 336 aa7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 MS4A6AQ9H2W1 248 aa7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 Q9H3A6 140 aa7.33□□□□□ -1.24
SNRNP40-201ENST00000263694 A0A087X0K7 114 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 PGPA6NDG6 321 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 HELTA6NFD8 242 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 ZNF705FA8MVS1 300 aaPredicted RBP7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 C11orf94C9JXX5 98 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 M0R3E3 92 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 IFNA1P01562 189 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 DEFB1P60022 68 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 CD81P60033 236 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 GNG5P63218 68 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 PMS2P11Q13670 270 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 ZNF506Q5JVG8 444 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 FAM24BQ8N5W8 94 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 C20orf173Q96LM9 149 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 CITED4Q96RK1 184 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 TREM1Q9NP99 234 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 MANBALQ9NQG1 85 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 MED9Q9NWA0 146 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 RPH3ALQ9UNE2 315 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 RNF24Q9Y225 148 aa7.32□□□□□ -1.24
SNRNP40-201ENST00000263694 A0A1W2PRE2 83 aa7.31□□□□□ -1.24
SNRNP40-201ENST00000263694 CD33P20138 364 aa7.31□□□□□ -1.24
SNRNP40-201ENST00000263694 BMI1P35226 326 aa7.31□□□□□ -1.24
SNRNP40-201ENST00000263694 PPT1P50897 306 aa7.31□□□□□ -1.24
SNRNP40-201ENST00000263694 CEBPGP53567 150 aa7.31□□□□□ -1.24
SNRNP40-201ENST00000263694 RBPMS2Q6ZRY4 209 aaKnown RBP7.31□□□□□ -1.24
SNRNP40-201ENST00000263694 DCANP1Q8TF63 244 aa7.31□□□□□ -1.24
SNRNP40-201ENST00000263694 C16orf92Q96LL3 132 aa7.31□□□□□ -1.24
SNRNP40-201ENST00000263694 NRN1Q9NPD7 142 aa7.31□□□□□ -1.24
SNRNP40-201ENST00000263694 ZNF331Q9NQX6 463 aaPredicted RBP7.31□□□□□ -1.24
SNRNP40-201ENST00000263694 VAX2Q9UIW0 290 aa7.31□□□□□ -1.24
SNRNP40-201ENST00000263694 PKD1L1Q8TDX9 2849 aa7.3□□□□□ -1.24
SNRNP40-201ENST00000263694 CMYA5Q8N3K9 4069 aa7.3□□□□□ -1.24
SNRNP40-201ENST00000263694 SCO2A0A1W2PP80 73 aa7.3□□□□□ -1.24
SNRNP40-201ENST00000263694 RAB19A4D1S5 217 aa7.3□□□□□ -1.24
SNRNP40-201ENST00000263694 PRAC2D3DTV9 90 aa7.3□□□□□ -1.24
SNRNP40-201ENST00000263694 DNASE2O00115 360 aaPredicted RBP7.3□□□□□ -1.24
SNRNP40-201ENST00000263694 SOCS3O14543 225 aa7.3□□□□□ -1.24
SNRNP40-201ENST00000263694 SLC25A5P05141 298 aaKnown RBP7.3□□□□□ -1.24
SNRNP40-201ENST00000263694 CD5P06127 495 aa7.3□□□□□ -1.24
SNRNP40-201ENST00000263694 SRP19P09132 144 aaKnown RBP7.3□□□□□ -1.24
SNRNP40-201ENST00000263694 IGLL1P15814 213 aa7.3□□□□□ -1.24
SNRNP40-201ENST00000263694 MEF2BQ02080 365 aaPredicted RBP7.3□□□□□ -1.24
SNRNP40-201ENST00000263694 CCDC28AQ8IWP9 274 aa7.3□□□□□ -1.24
SNRNP40-201ENST00000263694 AGRNO00468 2067 aa7.3□□□□□ -1.24
SNRNP40-201ENST00000263694 IGLV1-51P01701 117 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 PDE6HQ13956 83 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 PEA15Q15121 130 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 GUCA2BQ16661 112 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 SGK494Q96LW2 274 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 LINC00479Q96M42 142 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 LINC00052Q96N35 136 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 ASCL2Q99929 193 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 OTORQ9NRC9 128 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 SIGLEC8Q9NYZ4 499 aa7.29□□□□□ -1.24
SNRNP40-201ENST00000263694 ANK2Q01484 3957 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms